# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj05025.fasta.huge -Q ../query/FLJ00209.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00209, 358 aa vs ./tmplib.10216 library 2210636 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.6629+/-0.00497; mu= 19.1516+/- 0.336 mean_var=146.0981+/-31.956, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.106109 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1887 ( 967 res) fk02232 ( 967) 109 28.1 3 KIAA1976 ( 351 res) fg02988 ( 351) 104 26.6 3.1 KIAA0945 ( 797 res) hj04760 ( 797) 107 27.6 3.4 KIAA1862 ( 1070 res) aj00563 (1070) 105 27.5 4.8 KIAA1059 ( 1297 res) hh12158 (1297) 104 27.5 5.9 KIAA0665 ( 760 res) hk02064 ( 760) 101 26.7 6.2 KIAA1197 ( 1487 res) fg01844 (1487) 103 27.5 7 KIAA1802 ( 821 res) fj21631 ( 821) 100 26.6 7.2 KIAA0824 ( 1644 res) hh02773 (1644) 101 27.2 9.1 FLJ00070 ( 1382 res) as00070 (1382) 100 27.0 9.3 KIAA1668 ( 791 res) fh11717 ( 791) 97 26.1 9.7 KIAA0771 ( 948 res) hk05113 ( 948) 97 26.2 11 FLJ00176 ( 403 res) sj00934 ( 403) 92 24.8 12 KIAA0673 ( 1215 res) hk02385 (1215) 97 26.4 12 KIAA1620 ( 1398 res) hj04150 (1398) 97 26.5 13 KIAA1509 ( 1365 res) fh14721 (1365) 96 26.3 14 KIAA0047 ( 268 res) ha01551 ( 268) 88 23.9 15 KIAA0228 ( 681 res) ha04738 ( 681) 92 25.2 15 KIAA1922 ( 370 res) fh11169 ( 370) 89 24.3 16 KIAA0909 ( 1234 res) hk10471 (1234) 93 25.8 18 KIAA0302 ( 2414 res) hf00409s2 (2414) 96 26.8 19 FLJ00087 ( 674 res) as00087 ( 674) 90 24.9 19 FLJ00042 ( 452 res) as00042 ( 452) 88 24.3 19 KIAA1547 ( 863 res) fh14154 ( 863) 91 25.2 19 KIAA1375 ( 546 res) fj04426 ( 546) 87 24.3 23 KIAA1086 ( 902 res) hj08218 ( 902) 87 24.7 30 KIAA1330 ( 945 res) fh15188 ( 945) 87 24.7 30 KIAA0508 ( 253 res) hh00207 ( 253) 80 22.7 33 FLJ00402 ( 137 res) sj07511 ( 137) 77 21.8 34 FLJ00202 ( 233 res) sj04223 ( 233) 79 22.5 35 KIAA0724 ( 1047 res) hk02773 (1047) 86 24.6 35 FLJ00289 ( 245 res) sh02613 ( 245) 79 22.5 36 KIAA1856 ( 1134 res) fh03203 (1134) 86 24.7 37 KIAA1242 ( 504 res) fh10406 ( 504) 82 23.5 38 KIAA0639 ( 1835 res) fg02716y2 (1835) 88 25.3 38 KIAA1986 ( 334 res) pg00636 ( 334) 80 22.9 38 KIAA1949 ( 662 res) fj02913 ( 662) 83 23.8 39 KIAA1951 ( 679 res) fj05532 ( 679) 83 23.8 39 KIAA1439 ( 561 res) hg01641b ( 561) 82 23.6 40 FLJ00317 ( 111 res) sh07047 ( 111) 74 21.1 42 KIAA0597 ( 971 res) hj02980 ( 971) 84 24.3 42 KIAA1482 ( 818 res) fj06205 ( 818) 83 24.0 43 KIAA1831 ( 663 res) hk00543 ( 663) 82 23.7 43 KIAA1971 ( 830 res) fk08985 ( 830) 83 24.0 43 KIAA0749 ( 678 res) hk04328 ( 678) 82 23.7 44 KIAA1924 ( 613 res) hh01339 ( 613) 81 23.5 46 KIAA1587 ( 991 res) fj08327 ( 991) 83 24.1 47 KIAA1742 ( 1301 res) pj01304s1 (1301) 84 24.5 49 KIAA0374 ( 584 res) hh00327 ( 584) 80 23.3 50 KIAA1907 ( 1737 res) ah00504 (1737) 85 24.8 51 >>KIAA1887 ( 967 res) fk02232 (967 aa) initn: 123 init1: 56 opt: 109 Z-score: 97.8 bits: 28.1 E(): 3 Smith-Waterman score: 109; 28.926% identity (52.066% similar) in 121 aa overlap (207-327:667-779) 180 190 200 210 220 230 FLJ002 VWSERLGQALELGYGLQVGTVWINAHGLRDPSVPTGGCKESGCSWHGGPDGLYEYLRPSG :. ::.. . . : ..: . :: KIAA18 LIALNSALLAATLDPPSGTPPQPCVLSAPQPGPPTSSVTTA--TTDPGASSLGKAPSNSG 640 650 660 670 680 690 240 250 260 270 280 290 FLJ002 TPARLSCLSKNLNYDTFGLAVPSTLPAGPEIGPRLLGPEAPGPSGIRLAISMATWLRVEP : .: :: :. . .: :.: ..: : :: : .: :: .:.... . : KIAA18 RPPQL--LSPLLGASLLGDL--SSLTSSPGALPSLLQPPGPLLSG-QLGLQLLPGGGAPP 700 710 720 730 740 300 310 320 330 340 350 FLJ002 RTSEVLWRPLTRLSLAGRASPQEPGQPCCGPWRLHWSAGSLPWPRGWRGRERSSRLRRRR ::. ::. : . . :..: :: : KIAA18 PLSEAS-SPLACLLQSLQIPPEQPEAPCLPPESPASALEPEPARPPLSALAPPHGSPDPP 750 760 770 780 790 800 FLJ002 WS KIAA18 VPELLTGRGSGKRGRRGGGGLRGINGEARPARGRKPGSRREPGRLALKWGTRGGFNGQME 810 820 830 840 850 860 >>KIAA1976 ( 351 res) fg02988 (351 aa) initn: 64 init1: 39 opt: 104 Z-score: 97.6 bits: 26.6 E(): 3.1 Smith-Waterman score: 104; 30.769% identity (50.427% similar) in 117 aa overlap (115-224:153-256) 90 100 110 120 130 140 FLJ002 GAVDMGARGAAACDLVQRFVREAQSQGAQVFQAGDVPSERPFYPPTLVSNLPPASPCAQV .: :.. : : .: .:::: : :.. KIAA19 VEGDGQSFSINFNITKVDGRGCRTAVTCFHYQLPTSPQNAPALP-ALPPTLPPACPQAHL 130 140 150 160 170 180 150 160 170 180 190 FLJ002 --EVPWPVVVASPFRTAKEALLVANGTPRGGSASVWSERLGQALELGY---GLQVGTVWI :.:: . : : . : : .: ::. . :..:: :. :: .: . KIAA19 LLETPWQL----PPRLRDREAQVQMGLGEG-SAGDMGAAGGETLE-GFPEEGLCTGPQRM 190 200 210 220 230 200 210 220 230 240 250 FLJ002 NAHG--LRDPSVPTGGCKESGCSWHGGPDGLYEYLRPSGTPARLSCLSKNLNYDTFGLAV . : .. :. .: : :: :: KIAA19 SQFGCGIKGKSI-SG-----GESWAGGTQAVKRAVCVECQQRLGRVTWRGEGRRGREATE 240 250 260 270 280 >>KIAA0945 ( 797 res) hj04760 (797 aa) initn: 122 init1: 47 opt: 107 Z-score: 96.9 bits: 27.6 E(): 3.4 Smith-Waterman score: 107; 25.532% identity (46.809% similar) in 235 aa overlap (118-345:64-281) 90 100 110 120 130 140 FLJ002 DMGARGAAACDLVQRFVREAQSQGAQVFQAGDVPSERPFYPPTLVSNLPPASPCA-QVEV : . ..: :: : : .: : .: . KIAA09 LTGRREPLQMEDSNMEQGVEGVEPGMPESPGHLTGRRKNYP-LRKRPLVPEKPKACKVLL 40 50 60 70 80 90 150 160 170 180 190 200 FLJ002 PWPVVVASPFRTAKEALLVANGTPRGGSASVWSERLGQALELGYGL-QVGTVWINAHGL- ::.: :.: :: . :. : . :: : : : .... .: : KIAA09 TRLENVAGP-RSADEADELPPDLPKPPSPAPSSEDPGLAQPRKRRLASLNAEALNNLLLE 100 110 120 130 140 150 210 220 230 240 250 260 FLJ002 RDPSVPTGGCKESGCSWHGGPDGLYEYLRPSGTPARLSCLSKNLNYDTFGLAVPSTLPA- :. . .: ..: : : . : .: : .: .: . . : KIAA09 REDTSSLAGTRRSRA---GDPHRSRDRDRATGG---WSSSKKRPRLGDLGGGSRDLSPEP 160 170 180 190 200 270 280 290 300 310 320 FLJ002 GPEIGPRLLGPEAPGPSGIRLA-ISMATWLRVEPRTSEVLWRPLTRLSLAGRAS-PQEPG .:. ::: : :: ::: .. :..:.. . : : .. . ::.. : : KIAA09 APDEGPRRDGDPAPK----RLASLNAAAFLKLSQERELPLRLPRAHAEVDGRSTEPPAPK 210 220 230 240 250 260 330 340 350 FLJ002 QPCCGPWRLHW-SAGSLPWPRGWRGRERSSRLRRRRWS : : .: .... .:..:.: KIAA09 AP-----RPKWPKVNGKNYPKAWQGASSGEAAGPPGWQGCPDEPWPSATPCGPSVQPSHK 270 280 290 300 310 >>KIAA1862 ( 1070 res) aj00563 (1070 aa) initn: 143 init1: 51 opt: 105 Z-score: 94.1 bits: 27.5 E(): 4.8 Smith-Waterman score: 133; 28.571% identity (46.531% similar) in 245 aa overlap (111-336:519-737) 90 100 110 120 130 140 FLJ002 RGLDGAVDMGARGAAACDLVQRFVREAQSQGAQVFQAGDVPSERPFYPPTLVSNLPPASP :. : . :. :.. :: : : KIAA18 VRDGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGS--PPG-SSPLQGLEN 490 500 510 520 530 540 150 160 170 180 190 FLJ002 CAQVEVPWPVVVASPFRTAKEALLVANGTPRGGSASVWS-ERLG---QALE---LGYGLQ : . :.: ::. : : .:. :: . :. .. : .: : :: : KIAA18 CLK-EIPVPVL-----RPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGR- 550 560 570 580 590 200 210 220 230 240 FLJ002 VGTVWINAHGLRDPSVPTGGCKESGCSWHGGPD------GLYEYLRPSGT---PARLSCL : . . : .:.: :..: . : .: : :....: : :. :. : :: KIAA18 -GEAPTRSLHLVSPQVFTSSCVPA-CHQRGFKDPGATRPGVWRWL-PEGSAPKPSPLHCL 600 610 620 630 640 650 250 260 270 280 290 300 FLJ002 SKNLNYDTFGLAVPSTLPAGPEIGPRLLGPEAPGPS-GIRLAISMATWLRVEPRTSEVLW . : :. ::. : . :: .:.:: : ..: . .:: :: KIAA18 ESALR----GI-----LPVRPLRFACVGGP-SPSPSPGSSSSFSGSEG--EDPRPEPELW 660 670 680 690 700 310 320 330 340 350 FLJ002 RPLT--RLSLAGRASPQEPGQPCCGPWRLHWSAGSLPWPRGWRGRERSSRLRRRRWS .:: : : . .: : .:: : :.:: KIAA18 KPLPQERDRLPS-CKPPVPLSPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPC 710 720 730 740 750 760 KIAA18 PVSQLEKRPRVSEASRGLELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPP 770 780 790 800 810 820 >>KIAA1059 ( 1297 res) hh12158 (1297 aa) initn: 98 init1: 46 opt: 104 Z-score: 92.5 bits: 27.5 E(): 5.9 Smith-Waterman score: 104; 31.746% identity (50.000% similar) in 126 aa overlap (111-227:107-228) 90 100 110 120 130 FLJ002 RGLDGAVDMGARGAAACDLVQRFVREAQSQGAQV-FQAGDVPSERPFYPPTLVSNLPPAS ::.. ..: :. :: : . : : : KIAA10 EAARTERPAGRPGAPLVRTGLLLLSTWVLAGAEITWDATGGPG-RPAAPASRPPALSPLS 80 90 100 110 120 130 140 150 160 170 180 190 FLJ002 PCAQVEVPWPVVVASPFRTA---KEA---LLVANGTPRGGSASVWSERLGQALEL-GYGL : : : :: .:: :.: ..: :: .: ::: .: . . : : : :. KIAA10 PRA-VASQWPEELASARRAAVLGRRAGPELLPQQGGGRGGEMQVEAGGTSPAGERRGRGI 140 150 160 170 180 190 200 210 220 230 240 250 FLJ002 QVGTVWINAHGLRDPSVPTGGCKESGCSWHGGP-DGLYEYLRPSGTPARLSCLSKNLNYD . . .:. : . : .: : .: .: :: KIAA10 PAPAKLGGARRSRRAQPPI--TQERGDAWATAPADGSRGSRPLAKGSREEVKAPRAGGSA 200 210 220 230 240 250 260 270 280 290 300 310 FLJ002 TFGLAVPSTLPAGPEIGPRLLGPEAPGPSGIRLAISMATWLRVEPRTSEVLWRPLTRLSL KIAA10 AEDLRLPSTSFALTGDSAHNQAMVHWSGHNSSVILILTKLYDFNLGSVTESSLWRSTDYG 260 270 280 290 300 310 >>KIAA0665 ( 760 res) hk02064 (760 aa) initn: 114 init1: 63 opt: 101 Z-score: 92.1 bits: 26.7 E(): 6.2 Smith-Waterman score: 118; 30.667% identity (46.667% similar) in 150 aa overlap (207-336:10-155) 180 190 200 210 220 230 FLJ002 VWSERLGQALELGYGLQVGTVWINAHGLRDPSVPTGGCKESGCSWHGGPDGL-YEYLRPS :. : :. . ::::: : :. KIAA06 PLGSMASAPPASPPGSEPPGPDPEPGGPDGPGAAQLAPG 10 20 30 240 250 260 270 280 FLJ002 GTPARLSCLSKNLNYDTFGLAVPST---------LPAGP----EIGPRLLGPEAPGP-SG . ::. . . .. :: :. ::: : ::: :: :: : :: KIAA06 PAELRLGAPVGGPDPQSPGLDEPAPGAAADGGARWSAGPAPGLEGGPRDPGPSAPPPRSG 40 50 60 70 80 90 290 300 310 320 330 FLJ002 IRLAISMATWLRVEPRTSEVLWRPLTRLS--LAGRASPQEPGQPCC---GPWRLHWSAGS : .. :: ::. :: .:. .. :.: : : .:.::. :..: KIAA06 PRGQLASPDAPGPGPR-SEA---PLPELDPLFSWTEEPEECGPASCPESAPFRLQGSSSS 100 110 120 130 140 150 340 350 FLJ002 LPWPRGWRGRERSSRLRRRRWS KIAA06 HRARGEVDVFSPFPAPTAGELALEQGPGSPPQPSDLSQTHPLPSEPVGSQEDGPRLRAVF 160 170 180 190 200 210 >>KIAA1197 ( 1487 res) fg01844 (1487 aa) initn: 113 init1: 78 opt: 103 Z-score: 91.2 bits: 27.5 E(): 7 Smith-Waterman score: 103; 23.041% identity (46.544% similar) in 217 aa overlap (127-334:405-610) 100 110 120 130 140 150 FLJ002 CDLVQRFVREAQSQGAQVFQAGDVPSERPFYPPTLVSNLPPASPCAQVEVPWPVVVASPF :: . :.. : : . .: :: ..::. KIAA11 DRTYTGLQTLGAETVVDVELHRHSLGEDCIYPQSSESDISDAPPSLPLTIPAPVKASSPI 380 390 400 410 420 430 160 170 180 190 200 FLJ002 RTAKEALLVANGTPRGGSASVWSERLGQALELGYGLQ--------VGTVWINAHGLRDPS . ..: . ... .: ::. .:: : .:. : . .:: . KIAA11 KQSHEPV-PDTSVEKGFPASTEAERHTPFYALPSSLERTPTKMTTSQKVTFCSHGNSAFQ 440 450 460 470 480 490 210 220 230 240 250 260 FLJ002 VPTGGCKESGCSWHGGPDGLYEYLRPSGTPARLSCLSKNLNYDTFGLAVPSTLPAGPEIG ...:: : .:.. . : : .:: : .. . .. :: :: : KIAA11 PIASSCKIVPQSQVPNPESPGK----SFQPITMSC--KIVSGSPISTPSPSPLPRTPTST 500 510 520 530 540 270 280 290 300 310 320 FLJ002 PRLLGPEAPGPSGIRLAISMATWL-RVEPRTSEVLWRPLTRLSLAGRASPQEPGQPCCGP : . . : . : .: :. : ...: :...: : :.: : KIAA11 PVHVKQGTAGSVINNPYVIMDKQPGQVIGATTPSTGSPTNKISTASQVS-QGTGSPV--P 550 560 570 580 590 600 330 340 350 FLJ002 WRLHWSAGSLPWPRGWRGRERSSRLRRRRWS ..: :. KIAA11 -KIHGSSFVTSTVKQEDSLFASMPPLCPIGSHPKVQSPKPITGGLGAFTKVIIKQEPGEA 610 620 630 640 650 660 >>KIAA1802 ( 821 res) fj21631 (821 aa) initn: 80 init1: 58 opt: 100 Z-score: 91.0 bits: 26.6 E(): 7.2 Smith-Waterman score: 124; 22.925% identity (44.269% similar) in 253 aa overlap (106-344:164-390) 80 90 100 110 120 130 FLJ002 RLRSGRGLDGAVDMGARGAAACDLVQRFVREAQSQGAQV---FQAGDVPSERPFYPPTLV : :. :. : .:. .:: .: : .. KIAA18 KSIPALSMETQKLGSVLSPESPKPTPLTPLEPQKPGSVVSPELQT-PLPSPEPSKPASVS 140 150 160 170 180 190 140 150 160 170 180 FLJ002 SNLPPAS-PCAQVEVPWPVVVASPFRTAK---EALLVANGTPRGGSASVWSERLGQALEL : :: : : . . :: : . : :.. .. ..:. . : . : :: KIAA18 SPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHFPETLGPP--- 200 210 220 230 240 190 200 210 220 230 240 FLJ002 GYGLQVGTVWINAHGLRDPSVPTGGCKESGCSWHGGPDGLYEYLRPSGTPARLSCLSKNL .: . ..: : ... . : : ..:.. : : . : . KIAA18 -----------SASSPESP-VLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPE 250 260 270 280 290 250 260 270 280 290 300 FLJ002 NYDTFGLAVPSTLPAGPEIGPRLLGPEAPGPSGIRLAISMATWLRVEPRTSEVLWRPLTR . : . : .: ..: : ::: : : : . .: .: :.: .. KIAA18 PWKPFPAVSPEPRRPAPAVSP---GSWKPGPPG-----SPRPW-KSNPSASSGPWKP-AK 300 310 320 330 340 310 320 330 340 350 FLJ002 LSLAGRASPQEPGQPCC-GPWRLHWSAGSLPW------PRGWRGRERSSRLRRRRWS . . .: .: :::. :..: : : .:. KIAA18 PAPSVSPGPWKPIPSVSPGPWKPTPSVSSASWKSSSVSPSSWKSPPASPESWKSGPPELR 350 360 370 380 390 400 KIAA18 KTAPTLSPEHWKAVPPVSPELRKPGPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKT 410 420 430 440 450 460 >>KIAA0824 ( 1644 res) hh02773 (1644 aa) initn: 131 init1: 65 opt: 101 Z-score: 89.1 bits: 27.2 E(): 9.1 Smith-Waterman score: 101; 34.343% identity (52.525% similar) in 99 aa overlap (189-278:1079-1169) 160 170 180 190 200 210 FLJ002 AKEALLVANGTPRGGSASVWSERLGQALELGYGLQV-GTVWINAHGLR--DPSVPTGGCK : :.. : . .. :.: :::: :: . KIAA08 HGQSVAGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFEGPSVPGGGLR 1050 1060 1070 1080 1090 1100 220 230 240 250 260 FLJ002 ESGCSWHGGP--DGLYEYLRPSGTPARLSCLSKNLNYDTF-GLAVPS--TLPAGPEIGP- : .::: .: . :: .: :.. : : . .: . : : :. : :: KIAA08 IEGPLGQGGPRFEGCHA-LRFDGQPGQPSLLPR---FDGLHGQPGPRFERTPGQP--GPQ 1110 1120 1130 1140 1150 1160 270 280 290 300 310 320 FLJ002 RLLGPEAPGPSGIRLAISMATWLRVEPRTSEVLWRPLTRLSLAGRASPQEPGQPCCGPWR :. :: :: KIAA08 RFDGP--PGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGTRFDNHPSQRLESVSFNQ 1170 1180 1190 1200 1210 1220 >>FLJ00070 ( 1382 res) as00070 (1382 aa) initn: 108 init1: 64 opt: 100 Z-score: 89.0 bits: 27.0 E(): 9.3 Smith-Waterman score: 100; 26.667% identity (48.148% similar) in 135 aa overlap (195-326:3-131) 170 180 190 200 210 220 FLJ002 VANGTPRGGSASVWSERLGQALELGYGLQVGTVWINAHGLRDPSVPTGGCKESGCSWHGG : :: .. : . ..: . . .. : FLJ000 VRGLVWASSWGWEVSALP--AVQSASPRLPPG 10 20 30 230 240 250 260 270 280 FLJ002 PDGLYEYLRPSGTPARLSCLSKNLNYDTF-GLAVPSTLPAGPEIGPRLLGPEAPGPSGIR : : :.. : : : . . . : :: :..: . ::.: :. ::: : FLJ000 PRGPLPPASPAALP-RCPLPSPGAPGPLLPSGAGPSPRPGAPPL-PRVLRPRMPGPRGA- 40 50 60 70 80 290 300 310 320 330 340 FLJ002 LAISMATWLRVEPRTS--EVLWRPLTRLSLAGRASPQEPGQPCCGPWRLHWSAGSLPWPR : ..: .: .. .: : :.:.::. :. : FLJ000 -AGGLAPEMRGAGAAGLLALLLLLLLLLGLGGRVEGGPAGERGAGGGGALARERFKVVFA 90 100 110 120 130 140 350 FLJ002 GWRGRERSSRLRRRRWS FLJ000 PVICKRTCLKGQCRDSCQQGSNMTLIGENGHSTDTLTGSGFRVVVCPLPCMNGGQCSSRN 150 160 170 180 190 200 358 residues in 1 query sequences 2210636 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:40 2009 done: Fri Feb 27 10:44:41 2009 Total Scan time: 0.490 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]