# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj04948.fasta.huge -Q ../query/FLJ00391.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00391, 124 aa
vs ./tmplib.10216 library
2210870 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 4.0396+/-0.00323; mu= 12.4567+/- 0.219
mean_var=59.8970+/-13.089, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40
Lambda= 0.165719
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1065 ( 665 res) hj05094 ( 665) 81 27.3 1.2
KIAA0020 ( 647 res) ha00602 ( 647) 77 26.3 2.4
KIAA0639 ( 1835 res) fg02716y2 (1835) 79 27.3 3.4
KIAA0751 ( 1200 res) hk04424 (1200) 76 26.4 4.2
KIAA1553 ( 670 res) fh17011 ( 670) 73 25.4 4.7
FLJ00335 ( 157 res) sj05150 ( 157) 67 23.2 4.8
KIAA1562 ( 1136 res) fh20205 (1136) 74 25.9 5.7
KIAA0898 ( 979 res) hk09541 ( 979) 73 25.5 6.1
KIAA0517 ( 792 res) hg00752 ( 792) 72 25.2 6.2
KIAA0499 ( 100 res) hg00204 ( 100) 63 22.1 6.9
KIAA0670 ( 1286 res) hk02359s1 (1286) 71 25.2 10
KIAA0355 ( 1082 res) hg01881 (1082) 70 24.9 11
KIAA1187 ( 813 res) fk03027 ( 813) 68 24.3 12
KIAA1173 ( 333 res) hk01721(revised) ( 333) 64 22.9 13
KIAA1586 ( 739 res) fj08085 ( 739) 67 24.0 14
FLJ00272 ( 165 res) sh00274 ( 165) 60 21.6 16
KIAA0719 ( 624 res) hk01141 ( 624) 65 23.4 17
KIAA0340 ( 1053 res) hg01396 (1053) 67 24.1 17
KIAA0914 ( 678 res) sj01106 ( 678) 65 23.5 18
KIAA0221 ( 1151 res) ha02799 (1151) 67 24.2 18
KIAA1230 ( 932 res) fh06860s1 ( 932) 66 23.8 19
FLJ00184 ( 580 res) sj01836 ( 580) 64 23.1 19
KIAA1019 ( 2309 res) fg00188s1 (2309) 69 25.0 21
KIAA1900 ( 582 res) fk07650 ( 582) 63 22.9 23
KIAA0597 ( 971 res) hj02980 ( 971) 65 23.6 23
KIAA1921 ( 545 res) fg00938 ( 545) 62 22.6 25
KIAA0522 ( 1555 res) hg01393 (1555) 66 24.1 26
FLJ00108 ( 216 res) as00108 ( 216) 58 21.2 26
KIAA0853 ( 967 res) hk06136 ( 967) 64 23.4 27
FLJ00195 ( 639 res) sj02957 ( 639) 62 22.7 28
KIAA0812 ( 1364 res) hg01044 (1364) 65 23.8 28
KIAA0274 ( 932 res) ha06690 ( 932) 63 23.1 31
KIAA1199 ( 1013 res) fg01973 (1013) 63 23.2 32
KIAA0250 ( 1122 res) ha02790 (1122) 63 23.2 35
KIAA0553 ( 1450 res) pf08859 (1450) 64 23.6 35
KIAA0179 ( 762 res) ha02738 ( 762) 61 22.6 37
KIAA0523 ( 468 res) hg01394 ( 468) 59 21.8 38
KIAA0817 ( 2785 res) hg01392s2 (2785) 66 24.4 39
KIAA1741 ( 1777 res) fh23254 (1777) 64 23.7 40
KIAA1831 ( 663 res) hk00543 ( 663) 60 22.3 40
KIAA1186 ( 405 res) pj00504 ( 405) 58 21.5 40
KIAA0454 ( 2296 res) bf02274 (2296) 65 24.0 40
FLJ00327 ( 266 res) sj02293 ( 266) 56 20.9 42
KIAA1670 ( 598 res) hh04251 ( 598) 59 22.0 44
KIAA0396 ( 627 res) hg00180s1 ( 627) 59 22.0 46
KIAA1837 ( 639 res) fh22040s1 ( 639) 59 22.0 46
KIAA1548 ( 545 res) fh15779 ( 545) 58 21.7 49
KIAA1414 ( 1586 res) fh14368(revised) (1586) 62 23.1 52
KIAA1966 ( 480 res) fh23421 ( 480) 57 21.4 53
KIAA0680 ( 635 res) hk02746 ( 635) 58 21.8 54
>>KIAA1065 ( 665 res) hj05094 (665 aa)
initn: 60 init1: 38 opt: 81 Z-score: 104.6 bits: 27.3 E(): 1.2
Smith-Waterman score: 81; 33.871% identity (50.000% similar) in 62 aa overlap (63-121:198-259)
40 50 60 70 80 90
FLJ003 LVSLVRWNLRNGYLNVAKWYDSKADLIFLLEEDLLTRESSRENGRRRGRNCELKDSFEKH
. .: : .: .: :. : . : :
KIAA10 RAQALKTKERMAQVATGMGSNQITFGRGSSQPNLSTSHSEQEYGKAGGSPASYHGSPEAS
170 180 190 200 210 220
100 110 120
FLJ003 -CPKSRTKKWACTSKWLYPVDL--PFLQHLLLCLL
::. :: :. : :.. ::: :: :
KIAA10 LCPQHRTGAPLGQSEELQPLSQRHPFLPHLGLASRPNGDWSQPCLTCDRAARATSPRVSS
230 240 250 260 270 280
KIAA10 ELEQARPQTSGEEELQLQLALAMSREVAEQEERLRRGDDLRLQMALEESRRDTVKIPKKK
290 300 310 320 330 340
>>KIAA0020 ( 647 res) ha00602 (647 aa)
initn: 41 init1: 41 opt: 77 Z-score: 99.6 bits: 26.3 E(): 2.4
Smith-Waterman score: 77; 25.000% identity (58.696% similar) in 92 aa overlap (19-106:514-597)
10 20 30 40
FLJ003 IGANDQEIAGCSVGGQGKMGLHGGEVGHLFQMLVSLVRWNL----RNG
.: :.: .. ..::. .: ..:
KIAA00 SISPALLSYLQEHAQEVVLDKSACVLVSDILGSATGDVQPTMNAIASLAATGLHPGGKDG
490 500 510 520 530 540
50 60 70 80 90 100
FLJ003 YLNVAKWYDSKADLIFLLEEDLLTRESSRENGRRRGRNCELKDSFEKHCPKSRTKKWACT
:..:. .. : .:.:.: .. .::::. .: : .. .: . :.:: .
KIAA00 ELHIAEHPAGHLVLKWLIEQD----KKMKENGRE---GCFAK-TLVEHVGMKNLKSWASV
550 560 570 580 590
110 120
FLJ003 SKWLYPVDLPFLQHLLLCLL
..
KIAA00 NRGAIILSSLLQSCDLEVANKVKAALKSLIPTLEKTKSTSKGIEILLEKLST
600 610 620 630 640
>>KIAA0639 ( 1835 res) fg02716y2 (1835 aa)
initn: 42 init1: 42 opt: 79 Z-score: 96.8 bits: 27.3 E(): 3.4
Smith-Waterman score: 79; 36.170% identity (55.319% similar) in 47 aa overlap (62-102:635-681)
40 50 60 70 80
FLJ003 MLVSLVRWNLRNGYLNVAKWYDSKADLIFLLEEDLLTRESSRENGRRR----GRNCELKD
::.. : : :. ::: .::. :
KIAA06 VTMKALGSNDPMQSILNSLEQQHEEEKRSALERQRLMYEHELEQLRRRLSPEKQNCRSMD
610 620 630 640 650 660
90 100 110 120
FLJ003 SFEKHCP--KSRTKKWACTSKWLYPVDLPFLQHLLLCLL
: : : ..: ..::
KIAA06 RFSFHSPSAQQRLRQWAEEREATLNNSLMRLREQIVKANLLVREANYIAEELDKRTEYKV
670 680 690 700 710 720
>>KIAA0751 ( 1200 res) hk04424 (1200 aa)
initn: 39 init1: 39 opt: 76 Z-score: 95.1 bits: 26.4 E(): 4.2
Smith-Waterman score: 76; 30.986% identity (56.338% similar) in 71 aa overlap (43-107:595-661)
20 30 40 50 60
FLJ003 VGGQGKMGLHGGEVGHLFQMLVSLVRWNLRNGYLNVAKWYDSKA-DLI--FLLEEDLLTR
.: :.. :.:. . .:: .: .::
KIAA07 SFESQKMDRPSISVTSPMSPGMLRDVPQFLSGQLSIKLWFDKVGHQLIVTILGAKDL---
570 580 590 600 610 620
70 80 90 100 110 120
FLJ003 ESSRENGRRRGRNCE---LKDSFEKHCPKSRTKKWACTSKWLYPVDLPFLQHLLLCLL
:::.:: :. . : : .:. ...: : . ::
KIAA07 -PSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERML
630 640 650 660 670 680
KIAA07 EITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPHPSPYMPRRQ
690 700 710 720 730 740
>>KIAA1553 ( 670 res) fh17011 (670 aa)
initn: 52 init1: 52 opt: 73 Z-score: 94.3 bits: 25.4 E(): 4.7
Smith-Waterman score: 73; 38.235% identity (61.765% similar) in 34 aa overlap (84-117:354-382)
60 70 80 90 100 110
FLJ003 SKADLIFLLEEDLLTRESSRENGRRRGRNCELKDSFEKHCPKSRTKKWACTSKWLYPVDL
...:::: . : :.:: :: :.:.
KIAA15 GLGLDAGSEGDPPRDDCYDSSSLPDDISVVKVEDSFEGERPGRRSKKI-----WLVPIDF
330 340 350 360 370
120
FLJ003 PFLQHLLLCLL
:.
KIAA15 DKLEIPQPDFEVPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYN
380 390 400 410 420 430
>>FLJ00335 ( 157 res) sj05150 (157 aa)
initn: 61 init1: 39 opt: 67 Z-score: 94.1 bits: 23.2 E(): 4.8
Smith-Waterman score: 67; 39.623% identity (56.604% similar) in 53 aa overlap (26-78:15-58)
10 20 30 40 50 60
FLJ003 IGANDQEIAGCSVGGQGKMGLHGGEVGHLFQMLVSLVRWNLRNGYLNVAKWYDSKADLIF
:: :: . : .:. : .: . ::::..
FLJ003 GLTSCPFHSSRRINVGSRFQAEIPL----MRDRALAAADPH--KADLVW
10 20 30 40
70 80 90 100 110 120
FLJ003 LLEEDLLTRESSRENGRRRGRNCELKDSFEKHCPKSRTKKWACTSKWLYPVDLPFLQHLL
::: :::::. :.
FLJ003 QPWEDL---ESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLHESRGDILETLNKLL
50 60 70 80 90 100
>>KIAA1562 ( 1136 res) fh20205 (1136 aa)
initn: 65 init1: 65 opt: 74 Z-score: 92.8 bits: 25.9 E(): 5.7
Smith-Waterman score: 74; 25.397% identity (57.143% similar) in 63 aa overlap (59-118:713-775)
30 40 50 60 70 80
FLJ003 LFQMLVSLVRWNLRNGYLNVAKWYDSKADLIFLLEEDLLTRESSRENGRRRGRNCELKDS
..:. :.. . .::. :. ::.. .:
KIAA15 SVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLFATRCNREKKDTRSYNCRVAES
690 700 710 720 730 740
90 100 110 120
FLJ003 FEKHCPKSRTKKWACTSKWLYPV---DLPFLQHLLLCLL
.: :: ... . : :. ::. .:
KIAA15 TYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPSSSPTLERGQMGSRQSHNSHQS
750 760 770 780 790 800
KIAA15 LNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQGQYQPRPSFRGNKYSRSYRYA
810 820 830 840 850 860
>>KIAA0898 ( 979 res) hk09541 (979 aa)
initn: 72 init1: 49 opt: 73 Z-score: 92.3 bits: 25.5 E(): 6.1
Smith-Waterman score: 73; 27.500% identity (55.000% similar) in 80 aa overlap (11-90:132-202)
10 20 30 40
FLJ003 IGANDQEIAGCSVGGQGKMGLHGGEVGHLFQMLVSLVRWN
:.. : :.::: : :. :. . . .
KIAA08 HEENEKDKCENHHEKLSVFCWTCKKCICHQCALWG----GMHGG---HTFKPLAEIYEQH
110 120 130 140 150
50 60 70 80 90 100
FLJ003 LRNGYLNVAKWYDSKADLIFLLEEDLLTRESSRENGRRRGRNCELKDSFEKHCPKSRTKK
. . .::: .:: :..: . :. :. .: : :.... :
KIAA08 VTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVR--EIRNAVEMMIARLDTQL
160 170 180 190 200 210
110 120
FLJ003 WACTSKWLYPVDLPFLQHLLLCLL
KIAA08 KNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMA
220 230 240 250 260 270
>>KIAA0517 ( 792 res) hg00752 (792 aa)
initn: 45 init1: 45 opt: 72 Z-score: 92.1 bits: 25.2 E(): 6.2
Smith-Waterman score: 72; 37.500% identity (70.000% similar) in 40 aa overlap (42-79:633-669)
20 30 40 50 60
FLJ003 SVGGQGKMGLHGGEVGHLFQMLVSLVRWNLRNGYLNVAKWYDSKADLIFLLEED--LLTR
:::.. :. :.:: .:... . ..::
KIAA05 KWVSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVV---DNKACCVFIFQPNGKIVTR
610 620 630 640 650
70 80 90 100 110 120
FLJ003 ESSRENGRRRGRNCELKDSFEKHCPKSRTKKWACTSKWLYPVDLPFLQHLLLCLL
.:: :: :.
KIAA05 FGSRGNGDRQFAGPHFAAVNSNNEIIITDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNA
660 670 680 690 700 710
>>KIAA0499 ( 100 res) hg00204 (100 aa)
initn: 85 init1: 58 opt: 63 Z-score: 91.3 bits: 22.1 E(): 6.9
Smith-Waterman score: 63; 44.444% identity (72.222% similar) in 18 aa overlap (103-120:9-26)
80 90 100 110 120
FLJ003 RENGRRRGRNCELKDSFEKHCPKSRTKKWACTSKWLYPVDLPFLQHLLLCLL
: . ::.. :::.:.:
KIAA04 ERDNRGINCPISQRYPANEPFLMHMLRVASSYFGEIFN
10 20 30
KIAA04 KNCNQRLKLDLGLLNICTTSIQQSIYQSSSGARYSAGCWDIGKNDKYLSLPSYCLLNKVG
40 50 60 70 80 90
124 residues in 1 query sequences
2210870 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 11:02:40 2009 done: Fri Feb 27 11:02:40 2009
Total Scan time: 0.300 Total Display time: 0.020
Function used was FASTA [version 34.26.5 April 26, 2007]