# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj04935.fasta.huge -Q ../query/FLJ00207.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00207, 288 aa
vs ./tmplib.10216 library
2210706 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 4.3268+/-0.00498; mu= 18.5755+/- 0.335
mean_var=153.9657+/-33.993, 0's: 0 Z-trim: 1 B-trim: 5 in 1/39
Lambda= 0.103362
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1121 ( 1390 res) hh10147 (1390) 128 31.1 0.43
KIAA1511 ( 1253 res) fg04486(revised) (1253) 116 29.2 1.4
KIAA0855 ( 632 res) hk06219 ( 632) 111 27.9 1.8
FLJ00198 ( 677 res) sj03504 ( 677) 108 27.5 2.5
KIAA0705 ( 1483 res) hg03359s1 (1483) 107 28.0 3.9
KIAA1197 ( 1487 res) fg01844 (1487) 107 28.0 3.9
KIAA0815 ( 1640 res) sh06087 (1640) 106 27.9 4.5
KIAA1330 ( 945 res) fh15188 ( 945) 103 27.1 4.8
KIAA1661 ( 90 res) hg03945 ( 90) 92 23.5 5.2
FLJ00056 ( 1310 res) as00056 (1310) 103 27.3 5.5
FLJ00128 ( 1546 res) sh01521 (1546) 103 27.4 6
KIAA0995 ( 1014 res) hk07740 (1014) 101 26.8 6.1
KIAA0510 ( 95 res) hh00345 ( 95) 90 23.3 6.6
KIAA1787 ( 1564 res) fh19054 (1564) 101 27.2 7.4
KIAA1602 ( 1003 res) fj10252 (1003) 99 26.5 7.4
KIAA0999 ( 1371 res) fj10213 (1371) 100 26.9 7.7
KIAA0279 ( 2854 res) ff05612 (2854) 101 27.6 9.7
KIAA0160 ( 803 res) ha03912s1 ( 803) 95 25.7 10
KIAA1091 ( 1359 res) hk04373 (1359) 97 26.5 10
KIAA1114 ( 1458 res) fj15925 (1458) 97 26.5 11
KIAA0144 ( 983 res) ha03843 ( 983) 94 25.7 12
KIAA1855 ( 1270 res) fg04654 (1270) 95 26.1 13
KIAA1938 ( 1376 res) hg00912s1 (1376) 95 26.2 13
KIAA0765 ( 952 res) hk04803s1 ( 952) 93 25.6 14
FLJ00176 ( 403 res) sj00934 ( 403) 89 24.3 14
KIAA1750 ( 431 res) pj02374 ( 431) 88 24.2 16
KIAA0222 ( 1204 res) ha02586 (1204) 92 25.6 17
KIAA2031 ( 515 res) ef03841 ( 515) 88 24.3 17
KIAA1442 ( 627 res) hh10127b ( 627) 88 24.5 19
KIAA1567 ( 924 res) fh22119 ( 924) 89 25.0 20
FLJ00059 ( 477 res) as00059 ( 477) 86 24.0 20
KIAA1279 ( 632 res) hh00842s1 ( 632) 87 24.3 21
KIAA0360 ( 1019 res) hh00062s1 (1019) 89 25.0 21
KIAA2036 ( 1322 res) pf06513 (1322) 90 25.4 21
FLJ00009 ( 540 res) as00009 ( 540) 86 24.1 22
KIAA0689 ( 547 res) hk03417 ( 547) 86 24.1 22
KIAA1579 ( 704 res) fj04678 ( 704) 87 24.4 22
KIAA0221 ( 1151 res) ha02799 (1151) 89 25.1 22
KIAA0278 ( 460 res) ha06634 ( 460) 85 23.8 22
FLJ00100 ( 672 res) as00100 ( 672) 86 24.2 24
KIAA2010 ( 920 res) fj14762 ( 920) 87 24.6 25
KIAA1816 ( 1162 res) fh16716 (1162) 88 25.0 25
FLJ00010 ( 772 res) as00010 ( 772) 86 24.4 25
FLJ00291 ( 159 res) sh02993 ( 159) 77 21.8 32
KIAA0641 ( 1326 res) hj03494s1 (1326) 86 24.8 32
KIAA0495 ( 209 res) hg00106 ( 209) 78 22.1 32
KIAA0227 ( 336 res) ha02748 ( 336) 80 22.8 32
KIAA1477 ( 870 res) fj04927 ( 870) 84 24.2 33
KIAA1053 ( 508 res) hh05049 ( 508) 81 23.3 35
FLJ00201 ( 705 res) sj04110 ( 705) 82 23.7 37
>>KIAA1121 ( 1390 res) hh10147 (1390 aa)
initn: 159 init1: 87 opt: 128 Z-score: 113.0 bits: 31.1 E(): 0.43
Smith-Waterman score: 128; 30.400% identity (60.000% similar) in 125 aa overlap (115-237:10-129)
90 100 110 120 130 140
FLJ002 LRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLI
:::. : . .. : . :. . ..
KIAA11 PGEKRPPGRADPRLPPAPPTFCTPSRGLQRPRSPGATML
10 20 30
150 160 170 180 190 200
FLJ002 HGSRRFSYSE--AERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAG
: :. .:.::.. . . . : .: . ..::::: . .. ::: :.::
KIAA11 DPSSSEEESDEIVEEESGKEVLGSAPS-GARLSP--SRTSEGSAGSAGLGGGGAG-AGAG
40 50 60 70 80 90
210 220 230 240 250 260
FLJ002 SGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRR
:: .::.::. ::::.. :.:.. .. :..:
KIAA11 VGAGGGGGSGASSGGGAGG-LQPSSRAGGGRPSSPSPSVVSEKEKEELERLQKEEEERKK
100 110 120 130 140 150
270 280
FLJ002 GPLLHCLRSCGARALVLAPGKAGAPN
KIAA11 RLQLYVFVMRCIAYPFNAKQPTDMARRQQKISKQQLQTVKDRFQAFLNGETQIMADEAFM
160 170 180 190 200 210
>>KIAA1511 ( 1253 res) fg04486(revised) (1253 aa)
initn: 209 init1: 88 opt: 116 Z-score: 103.6 bits: 29.2 E(): 1.4
Smith-Waterman score: 116; 31.250% identity (48.214% similar) in 112 aa overlap (150-253:168-275)
120 130 140 150 160 170
FLJ002 PEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGG
.:. . ::: . .: : : ::
KIAA15 AKTVAEKWAYERVEERFERIPEPVQRRIVYWSFPRNEREICMYS-SFQYRGGPGAGAAGG
140 150 160 170 180 190
180 190 200 210 220 230
FLJ002 DSGEGSAGEGERAAPGA--------GDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVAL
.: . : :: . ::: : .:::.. ...: ::: :: . :. :
KIAA15 AAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASPGLGAGAGAAGCGGEGLPFRRGIR---
200 210 220 230 240 250
240 250 260 270 280
FLJ002 LLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPGKAGAPN
:: .: : :. .: :
KIAA15 LLDSGSVENVLQVGFHLSGTVTELATASEPAVTYKVAISFDRCKITSVTCGCGNKDIFYC
260 270 280 290 300 310
>>KIAA0855 ( 632 res) hk06219 (632 aa)
initn: 175 init1: 76 opt: 111 Z-score: 102.0 bits: 27.9 E(): 1.8
Smith-Waterman score: 111; 33.077% identity (55.385% similar) in 130 aa overlap (114-235:435-560)
90 100 110 120 130 140
FLJ002 QLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFL
:: : . :: : . : .: ...:
KIAA08 ALQLEQQVKELQEKLGQVMETLTSAEKEPEAAVPASGTGGESSG--LMDLLEEKADLREH
410 420 430 440 450 460
150 160 170 180 190
FLJ002 IHGSRRFSYSEAERES-NRAARAFLRALG---WDWGPDGG--DSGEGSAGEGERAAPGAG
.. . .... . .:: .. .. .: : : .: :: ..: :..:: .:: .::
KIAA08 VE-KLELGFIQYRRERCHQNVHRLLTEPGDSAKDASPGGGHHQAGPGQGGEEGEAAGAAG
470 480 490 500 510 520
200 210 220 230 240 250
FLJ002 D--AAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAF
: :: :: : : :: . :: : :::: . : :
KIAA08 DGVAACGSYNEGHGKFLAAAQNPAAEP-SPGAPAPQELGAADKHGDLCEASLTNSVEPAQ
530 540 550 560 570 580
260 270 280
FLJ002 VPTALRRGPLLHCLRSCGARALVLAPGKAGAPN
KIAA08 GEAREGSSQDNPTAQPIVQLLGEMQDHQEHPGLGSNCCVPCFCWAWLPRRRR
590 600 610 620 630
>>FLJ00198 ( 677 res) sj03504 (677 aa)
initn: 131 init1: 104 opt: 108 Z-score: 99.3 bits: 27.5 E(): 2.5
Smith-Waterman score: 123; 46.154% identity (67.308% similar) in 52 aa overlap (179-230:576-622)
150 160 170 180 190 200
FLJ002 RFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAGSGAEFA
:::: :.: : : ::: ..:: :.
FLJ001 EPAGPCPGAAAAEPAGAGAQQPPAGREVCAGDSGPGAAPE----AGGAGGGGAG-GTAVP
550 560 570 580 590 600
210 220 230 240 250 260
FLJ002 GGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHC
::: : .: :..: .::...:
FLJ001 GGDPRAAAGPASGPQGPGTAAAAAGGRARGTAGAAPRPQGQHAGTGAGPPGAAGPARAAA
610 620 630 640 650 660
>>KIAA0705 ( 1483 res) hg03359s1 (1483 aa)
initn: 182 init1: 81 opt: 107 Z-score: 95.8 bits: 28.0 E(): 3.9
Smith-Waterman score: 111; 33.333% identity (58.559% similar) in 111 aa overlap (136-237:1349-1459)
110 120 130 140 150 160
FLJ002 RARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRA-AR
::::. : .. . :: : ...: :
KIAA07 EHDVRKPKELSACGQKKQRLGEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAP
1320 1330 1340 1350 1360 1370
170 180 190 200 210
FLJ002 AFLRALGWDWGPDGG-DSGEGSAG------EGERAAPG-AGDAAAGSGAEFAGGDGAARG
.. : . : . :: .. ...:: :: :::. :: ...:::: : : ..::.
KIAA07 GLAAADAADAARAGGKEAPRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARA
1380 1390 1400 1410 1420 1430
220 230 240 250 260 270
FLJ002 GGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARA
: .: ::.. : ..:
KIAA07 GPRPGPRPPGGAPARKAAVAPGPWKVPGSDKLPSVLKPGASAASR
1440 1450 1460 1470 1480
>>KIAA1197 ( 1487 res) fg01844 (1487 aa)
initn: 300 init1: 91 opt: 107 Z-score: 95.8 bits: 28.0 E(): 3.9
Smith-Waterman score: 110; 24.219% identity (60.156% similar) in 128 aa overlap (108-226:780-906)
80 90 100 110 120 130
FLJ002 KLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAEL---A
..:. : . ::. . : . .: : :
KIAA11 KAVGPKQVVTQGVAKAIVSGGGGTIVAQPVQTLTKAQVTAAGPQKSGSQGSVMATLQLPA
750 760 770 780 790 800
140 150 160 170 180
FLJ002 QQRAAHTFLIHGSRRFSYSEAERESNRAAR------AFLRALGWDWGPDGGDSGEGSAGE
. : . : :.. . .... :... :.::: . . . ..:... :..:
KIAA11 TNLANLANLPPGTKLYLTTNSKNPSGKGKLLLIPQGAILRATN-NANLQSGSAASGGSGA
810 820 830 840 850 860
190 200 210 220 230 240
FLJ002 GERAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAK
: .. :.: .....:. .:: :.. :::. . .::
KIAA11 GGGGGGGGGGGSGSGGGGSTGGGGGTAGGGTQSTAGPGGISQHLTYTSYILKQTPQGTFL
870 880 890 900 910 920
250 260 270 280
FLJ002 AGLRTAFVPTALRRGPLLHCLRSCGARALVLAPGKAGAPN
KIAA11 VGQPSPQTSGKQLTTGSVVQGTLGVSTSSAQGQQTLKVISGQKTTLFTQAAHGGQASLMK
930 940 950 960 970 980
>>KIAA0815 ( 1640 res) sh06087 (1640 aa)
initn: 68 init1: 68 opt: 106 Z-score: 94.6 bits: 27.9 E(): 4.5
Smith-Waterman score: 106; 27.966% identity (50.847% similar) in 118 aa overlap (174-288:8-121)
150 160 170 180 190 200
FLJ002 IHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGE--GSAGEGERAAPGAGDAAA
: .: : :..:. :.::.: ..:
KIAA08 PGRVPAGWTRRSGLRGATLGAGGKPGRSAPAATLGSA
10 20 30
210 220 230 240 250 260
FLJ002 GSG-AEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTAL
. : :.. :: :::.. : :: :. .: .. :.:. :.. . .:
KIAA08 DRARAPVAASYGARGGGGSGEP--PGPPVSRRAEEAPARTMSFLEEARAAGRAVVLALVL
40 50 60 70 80 90
270 280
FLJ002 RRGPLLHCLRSCGARALVLAPGKAGAPN
: . : : :. : . : :.
KIAA08 LLLPAVPVGASVPPRPLL--PLQPGMPHVCAEQELTLVGRRQPCVQALSHTVPVWKAGCG
100 110 120 130 140 150
>>KIAA1330 ( 945 res) fh15188 (945 aa)
initn: 82 init1: 56 opt: 103 Z-score: 94.1 bits: 27.1 E(): 4.8
Smith-Waterman score: 115; 32.500% identity (51.250% similar) in 160 aa overlap (137-273:265-416)
110 120 130 140 150 160
FLJ002 ARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHG--SRRFSYSEAERESNRAAR
..:.:.:. :::.. . .:: .:.:
KIAA13 ATLTPTVEVAGLSPRTSRRILERVENNHLVQSAQTLLLSPCTSRRLT-GLLDREV-QAGR
240 250 260 270 280 290
170 180 190 200
FLJ002 AFLRALGWDWGP---------------DGGDSGEG-SAGEGERAAPGAGDAAAGSGAEFA
: : .::: : : ..:: : :::: . : : .:.. . .:
KIAA13 QALAAARGSWGPGPSSLTVPAIVVDEEDPGLASEGASEGEGEVSLEGPGLLGASQESSMA
300 310 320 330 340 350
210 220 230 240 250 260
FLJ002 GGDGAARGGGAAAP-LSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTAL----RRG
: : : :: ::: .:.: :. : . : : .:: .: .: : ::
KIAA13 GRLGEA--GGQAAPGQGPSAESIAQEPSQEE---KFPGEALTGLPAA-TPEELALGARRK
360 370 380 390 400
270 280
FLJ002 PLLHCLRSCGARALVLAPGKAGAPN
.: .:. :
KIAA13 RFLPKVRAAGDGEATTPEERESPTVSPRGPRKSLVPGSPGTPGRERRSPTQGRKASMLEV
410 420 430 440 450 460
>>KIAA1661 ( 90 res) hg03945 (90 aa)
initn: 145 init1: 66 opt: 92 Z-score: 93.5 bits: 23.5 E(): 5.2
Smith-Waterman score: 99; 36.066% identity (55.738% similar) in 61 aa overlap (171-226:30-88)
150 160 170 180 190
FLJ002 TFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAG----EGERAAPGA
: : : : :: .:..: .:. . :.
KIAA16 GDDGGGCDDGDDDGDDDGGGGDGGGDGDDGGDGGDDDGDHDDGDGGYGGDDGDDDGDGG
10 20 30 40 50
200 210 220 230 240 250
FLJ002 GDAAAGSGAEFAGGDGAAR-GGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAF
::. .. . ::: : ::: : :. :
KIAA16 GDGDDDDSDD--GGDDANDDGGGCHALLTSGKD
60 70 80 90
260 270 280
FLJ002 VPTALRRGPLLHCLRSCGARALVLAPGKAGAPN
>>FLJ00056 ( 1310 res) as00056 (1310 aa)
initn: 114 init1: 76 opt: 103 Z-score: 93.0 bits: 27.3 E(): 5.5
Smith-Waterman score: 119; 30.216% identity (52.518% similar) in 139 aa overlap (118-237:653-789)
90 100 110 120 130 140
FLJ002 LPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGS
: :.: : :: .. :: :: .. .:
FLJ000 QERLAQAREALALEENATSQKVLDIFEQRLEQVESGLHRALRLQRFFQQ--AHEWVDEGF
630 640 650 660 670 680
150 160 170 180 190
FLJ002 RRFSYSEAERESNRAARAF-------------LRALGWDWGPDGG--DSGEGSAGEGE--
:.. . ::. :: :. .:::. : : .. . :. .: :
FLJ000 ARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCQARCQELE
690 700 710 720 730 740
200 210 220 230 240
FLJ002 -RAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVA-LLLPAGPEFLWLWFGLAK
: :. :. : . .:::. ::. .: ::. ... ::::..:
FLJ000 RRIQQHLGEEASPRGYRRRRADGASSGGAQWGPRSPSPSLSSLLLPSSPGPRPAPSHCSL
750 760 770 780 790 800
250 260 270 280
FLJ002 AGLRTAFVPTALRRGPLLHCLRSCGARALVLAPGKAGAPN
FLJ000 APCGEDYEEEGPELAPEAEGRPPRAVLIRGLEVTSTEVVDRTCSPREHVLLGRARGPDGP
810 820 830 840 850 860
288 residues in 1 query sequences
2210706 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:44:39 2009 done: Fri Feb 27 10:44:39 2009
Total Scan time: 0.440 Total Display time: 0.070
Function used was FASTA [version 34.26.5 April 26, 2007]