# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj04583.fasta.nr -Q ../query/FLJ00389.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00389, 351 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826125 sequences Expectation_n fit: rho(ln(x))= 5.1746+/-0.000183; mu= 9.9252+/- 0.010 mean_var=69.8693+/-13.522, 0's: 30 Z-trim: 41 B-trim: 132 in 2/65 Lambda= 0.153437 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748624|dbj|BAC03449.1| FLJ00389 protein [Homo ( 351) 2315 521.3 1.1e-145 gi|6707734|sp|Q13077.1|TRAF1_HUMAN RecName: Full=T ( 416) 2006 452.9 5.1e-125 gi|114626393|ref|XP_001158250.1| PREDICTED: TNF re ( 416) 1998 451.2 1.8e-124 gi|55729058|emb|CAH91266.1| hypothetical protein [ ( 416) 1989 449.2 7e-124 gi|109110420|ref|XP_001095862.1| PREDICTED: simila ( 416) 1984 448.1 1.5e-123 gi|194381570|dbj|BAG58739.1| unnamed protein produ ( 294) 1936 437.3 1.8e-120 gi|149738082|ref|XP_001504769.1| PREDICTED: TNF re ( 415) 1935 437.2 2.8e-120 gi|119901001|ref|XP_613776.3| PREDICTED: similar t ( 415) 1876 424.2 2.4e-116 gi|109469766|ref|XP_001080233.1| PREDICTED: simila ( 480) 1804 408.3 1.7e-111 gi|26325122|dbj|BAC26315.1| unnamed protein produc ( 409) 1797 406.7 4.3e-111 gi|148676689|gb|EDL08636.1| Tnf receptor-associate ( 412) 1797 406.7 4.3e-111 gi|731002|sp|P39428.1|TRAF1_MOUSE RecName: Full=TN ( 409) 1794 406.0 6.8e-111 gi|74203048|dbj|BAE26224.1| unnamed protein produc ( 409) 1791 405.3 1.1e-110 gi|66910221|gb|AAH96595.1| Tnf receptor-associated ( 409) 1778 402.5 7.9e-110 gi|149038936|gb|EDL93156.1| rCG45902 [Rattus norve ( 278) 1706 386.4 3.6e-105 gi|73972033|ref|XP_855528.1| PREDICTED: similar to ( 413) 1558 353.8 3.6e-95 gi|165971266|gb|AAI58697.1| Unknown (protein for I ( 364) 1508 342.7 7.1e-92 gi|126294101|ref|XP_001369540.1| PREDICTED: simila ( 579) 1481 336.8 6.4e-90 gi|194475176|gb|ACF74539.1| TNF receptor-associate ( 210) 1306 297.8 1.3e-78 gi|118099434|ref|XP_415406.2| PREDICTED: similar t ( 558) 1161 266.0 1.3e-68 gi|93117589|gb|ABE99697.1| TNF receptor associated ( 552) 981 226.1 1.3e-56 gi|169158233|emb|CAQ14105.1| novel protein similar ( 551) 950 219.3 1.5e-54 gi|73967509|ref|XP_537792.2| PREDICTED: similar to ( 523) 904 209.1 1.7e-51 gi|123209860|emb|CAM15136.1| novel protein similar ( 532) 904 209.1 1.7e-51 gi|73967507|ref|XP_857202.1| PREDICTED: similar to ( 476) 900 208.2 2.9e-51 gi|73967511|ref|XP_857289.1| PREDICTED: similar to ( 501) 900 208.2 3e-51 gi|93117587|gb|ABE99696.1| TNF receptor associated ( 536) 900 208.2 3.1e-51 gi|73967503|ref|XP_857114.1| PREDICTED: similar to ( 509) 899 207.9 3.5e-51 gi|73967505|ref|XP_848820.1| PREDICTED: similar to ( 518) 899 208.0 3.6e-51 gi|47223568|emb|CAF99177.1| unnamed protein produc ( 519) 898 207.7 4.2e-51 gi|210126378|gb|EEA74065.1| hypothetical protein B ( 552) 892 206.4 1.1e-50 gi|194226052|ref|XP_001497958.2| PREDICTED: simila ( 548) 887 205.3 2.4e-50 gi|210087286|gb|EEA35668.1| hypothetical protein B ( 481) 886 205.1 2.5e-50 gi|26343105|dbj|BAC35209.1| unnamed protein produc ( 501) 886 205.1 2.6e-50 gi|731003|sp|P39429.1|TRAF2_MOUSE RecName: Full=TN ( 501) 886 205.1 2.6e-50 gi|26332439|dbj|BAC29937.1| unnamed protein produc ( 501) 886 205.1 2.6e-50 gi|210126382|gb|EEA74069.1| hypothetical protein B ( 503) 886 205.1 2.6e-50 gi|2736258|gb|AAC53545.1| tumor necrosis factor re ( 508) 886 205.1 2.6e-50 gi|126302647|ref|XP_001366851.1| PREDICTED: simila ( 502) 885 204.8 3e-50 gi|126302645|ref|XP_001366797.1| PREDICTED: simila ( 508) 885 204.8 3e-50 gi|74198042|dbj|BAE35201.1| unnamed protein produc ( 501) 884 204.6 3.5e-50 gi|31620987|emb|CAD69021.2| tumor necrosis factor ( 526) 883 204.4 4.2e-50 gi|210126476|gb|EEA74163.1| hypothetical protein B ( 482) 881 203.9 5.3e-50 gi|210087302|gb|EEA35684.1| hypothetical protein B ( 475) 880 203.7 6.2e-50 gi|119904323|ref|XP_874100.2| PREDICTED: similar t ( 516) 880 203.7 6.6e-50 gi|118099110|ref|XP_415560.2| PREDICTED: similar t ( 507) 879 203.5 7.6e-50 gi|210087285|gb|EEA35667.1| hypothetical protein B ( 644) 878 203.4 1.1e-49 gi|90085329|dbj|BAE91405.1| unnamed protein produc ( 312) 874 202.3 1.1e-49 gi|109109693|ref|XP_001092078.1| PREDICTED: simila ( 501) 875 202.6 1.4e-49 gi|210126473|gb|EEA74160.1| hypothetical protein B ( 631) 875 202.7 1.7e-49 >>gi|21748624|dbj|BAC03449.1| FLJ00389 protein [Homo sap (351 aa) initn: 2315 init1: 2315 opt: 2315 Z-score: 2771.4 bits: 521.3 E(): 1.1e-145 Smith-Waterman score: 2315; 100.000% identity (100.000% similar) in 351 aa overlap (1-351:1-351) 10 20 30 40 50 60 FLJ003 AQEAVFELRRRLTPRWLRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 AQEAVFELRRRLTPRWLRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQ 10 20 30 40 50 60 70 80 90 100 110 120 FLJ003 WKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 WKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEK 70 80 90 100 110 120 130 140 150 160 170 180 FLJ003 LLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 LLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQ 130 140 150 160 170 180 190 200 210 220 230 240 FLJ003 KDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 KDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKL 190 200 210 220 230 240 250 260 270 280 290 300 FLJ003 CLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 CLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPD 250 260 270 280 290 300 310 320 330 340 350 FLJ003 LSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 LSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST 310 320 330 340 350 >>gi|6707734|sp|Q13077.1|TRAF1_HUMAN RecName: Full=TNF r (416 aa) initn: 2006 init1: 2006 opt: 2006 Z-score: 2400.7 bits: 452.9 E(): 5.1e-125 Smith-Waterman score: 2006; 100.000% identity (100.000% similar) in 305 aa overlap (47-351:112-416) 20 30 40 50 60 70 FLJ003 LRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMAL :::::::::::::::::::::::::::::: gi|670 AEAGIGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMAL 90 100 110 120 130 140 80 90 100 110 120 130 FLJ003 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|670 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV 150 160 170 180 190 200 140 150 160 170 180 190 FLJ003 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|670 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME 210 220 230 240 250 260 200 210 220 230 240 250 FLJ003 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|670 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH 270 280 290 300 310 320 260 270 280 290 300 310 FLJ003 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|670 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA 330 340 350 360 370 380 320 330 340 350 FLJ003 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST ::::::::::::::::::::::::::::::::::: gi|670 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST 390 400 410 >>gi|114626393|ref|XP_001158250.1| PREDICTED: TNF recept (416 aa) initn: 1998 init1: 1998 opt: 1998 Z-score: 2391.1 bits: 451.2 E(): 1.8e-124 Smith-Waterman score: 1998; 99.344% identity (100.000% similar) in 305 aa overlap (47-351:112-416) 20 30 40 50 60 70 FLJ003 LRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMAL :::::::::::::::::::::::::::::: gi|114 AEAGVGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMAL 90 100 110 120 130 140 80 90 100 110 120 130 FLJ003 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV 150 160 170 180 190 200 140 150 160 170 180 190 FLJ003 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME 210 220 230 240 250 260 200 210 220 230 240 250 FLJ003 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|114 EASFDGTFLWKITNVTRRCHESACGRTISLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH 270 280 290 300 310 320 260 270 280 290 300 310 FLJ003 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA 330 340 350 360 370 380 320 330 340 350 FLJ003 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST ::::::.:::::::::::::::::::::::::::: gi|114 SGCPLFLPLSKLQSPKHAYVKDDTMFLKCIVETST 390 400 410 >>gi|55729058|emb|CAH91266.1| hypothetical protein [Pong (416 aa) initn: 1989 init1: 1989 opt: 1989 Z-score: 2380.3 bits: 449.2 E(): 7e-124 Smith-Waterman score: 1989; 99.016% identity (99.672% similar) in 305 aa overlap (47-351:112-416) 20 30 40 50 60 70 FLJ003 LRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMAL :::::::::::::::::::::::::::::: gi|557 AEAGVGCPFAGVGCSFKGSPQSVQEHEVTSQTSHLNLLLGFMKQWKARLGCGLESGPMAL 90 100 110 120 130 140 80 90 100 110 120 130 FLJ003 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV 150 160 170 180 190 200 140 150 160 170 180 190 FLJ003 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME :::.::::::::::::::::::::::::::::::::: :::::::::::::::::::::: gi|557 AVLDKEVEASHLALATSIHQSQLDRERILSLEQRVVEPQQTLAQKDQALGKLEQSLRLME 210 220 230 240 250 260 200 210 220 230 240 250 FLJ003 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH 270 280 290 300 310 320 260 270 280 290 300 310 FLJ003 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LSLFIVLMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA 330 340 350 360 370 380 320 330 340 350 FLJ003 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST ::::::::::::::::::::::::::::::::::: gi|557 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST 390 400 410 >>gi|109110420|ref|XP_001095862.1| PREDICTED: similar to (416 aa) initn: 1983 init1: 1983 opt: 1984 Z-score: 2374.3 bits: 448.1 E(): 1.5e-123 Smith-Waterman score: 1984; 89.736% identity (93.255% similar) in 341 aa overlap (11-351:76-416) 10 20 30 40 FLJ003 AQEAVFELRRRLTPRWLRLELGAPLQVSAAPSREAHSLCK : :. . .: :. . . . . . gi|109 LRNSEDQICPKCRGEDLQSVSPGSRLRTLERAHPEVAEAGVGCPFAGVGCSFKGSPQSVQ 50 60 70 80 90 100 50 60 70 80 90 100 FLJ003 SMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCY . ::::::::::::::::.::: ::::::::::::::::::::::::::::::::: gi|109 EHEVTSQTSHLNLLLGFMKQWKTRLGSGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCY 110 120 130 140 150 160 110 120 130 140 150 160 FLJ003 RAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLD 170 180 190 200 210 220 170 180 190 200 210 220 FLJ003 RERILSLEQRVVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RERILSLEQRVVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESAC 230 240 250 260 270 280 230 240 250 260 270 280 FLJ003 GRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKV 290 300 310 320 330 340 290 300 310 320 330 340 FLJ003 TFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDT :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|109 TFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDT 350 360 370 380 390 400 350 FLJ003 MFLKCIVETST ::::::::::: gi|109 MFLKCIVETST 410 >>gi|194381570|dbj|BAG58739.1| unnamed protein product [ (294 aa) initn: 1936 init1: 1936 opt: 1936 Z-score: 2319.1 bits: 437.3 E(): 1.8e-120 Smith-Waterman score: 1936; 100.000% identity (100.000% similar) in 294 aa overlap (58-351:1-294) 30 40 50 60 70 80 FLJ003 SAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQA :::::::::::::::::::::::::::::: gi|194 MKQWKARLGCGLESGPMALEQNLSDLQLQA 10 20 30 90 100 110 120 130 140 FLJ003 AVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASH 40 50 60 70 80 90 150 160 170 180 190 200 FLJ003 LALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWK 100 110 120 130 140 150 210 220 230 240 250 260 FLJ003 ITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGE 160 170 180 190 200 210 270 280 290 300 310 320 FLJ003 YDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 YDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSK 220 230 240 250 260 270 330 340 350 FLJ003 LQSPKHAYVKDDTMFLKCIVETST :::::::::::::::::::::::: gi|194 LQSPKHAYVKDDTMFLKCIVETST 280 290 >>gi|149738082|ref|XP_001504769.1| PREDICTED: TNF recept (415 aa) initn: 1934 init1: 1934 opt: 1935 Z-score: 2315.7 bits: 437.2 E(): 2.8e-120 Smith-Waterman score: 1935; 89.091% identity (94.848% similar) in 330 aa overlap (21-350:85-414) 10 20 30 40 50 FLJ003 AQEAVFELRRRLTPRWLRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSH .: :. . . . .. . . :..: gi|149 LKCRGDDSQSVGPGSLVSQEKDLPEVAEAGVGCPFAGVGCSFKGSPKFMQEHEVASQATH 60 70 80 90 100 110 60 70 80 90 100 110 FLJ003 LNLLLGFMKQWKARLGCGLESGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEE :::.:::::::::.:: :: :::::::::::::::::::::::::::::::::::::::: gi|149 LNLVLGFMKQWKAQLGSGLGSGPMALEQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEE 120 130 140 150 160 170 120 130 140 150 160 170 FLJ003 LALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALATSIHQSQLDRERILSLEQR :::::::::::::::::::::::::::::::::::::::::.::::::::::.::::::: gi|149 LALQHFMKEKLLAELEGKLRVFENIVAVLNKEVEASHLALAASIHQSQLDREHILSLEQR 180 190 200 210 220 230 180 190 200 210 220 230 FLJ003 VVELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPA :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VLELQQTLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCHESACGRTVSLFSPA 240 250 260 270 280 290 240 250 260 270 280 290 FLJ003 FYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNR ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 FYTAKYGYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLIDQNNR 300 310 320 330 340 350 300 310 320 330 340 350 FLJ003 EHAIDAFRPDLSSASFQRPQSETNVASGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETS :::::::::::.::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 EHAIDAFRPDLNSASFQRPQSETNVASGCPLFFPLSRLQSPKHAYVKDDTMFLKCIVETS 360 370 380 390 400 410 FLJ003 T gi|149 A >>gi|119901001|ref|XP_613776.3| PREDICTED: similar to TN (415 aa) initn: 1896 init1: 1868 opt: 1876 Z-score: 2245.2 bits: 424.2 E(): 2.4e-116 Smith-Waterman score: 1876; 92.459% identity (98.361% similar) in 305 aa overlap (47-351:111-415) 20 30 40 50 60 70 FLJ003 LRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMAL :..::::::::::::::.:: :: ::::: gi|119 AEAGVGCPFAGVGCSFKGSPKFMEEHEVTSQAAHLNLLLGFMKQWKAQLGSGLGYGPMAL 90 100 110 120 130 140 80 90 100 110 120 130 FLJ003 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV :.::::::::.:::::::::::::::::::::.::::.:::::::: :::::: :::::: gi|119 ERNLSDLQLQGAVEVAGDLEVDCYRAPCSESQDELALHHFMKEKLLNELEGKLCVFENIV 150 160 170 180 190 200 140 150 160 170 180 190 FLJ003 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME :::::::::::::::.::::::::::.::::::::.::::::::::::::::::::::.: gi|119 AVLNKEVEASHLALAASIHQSQLDREHILSLEQRVLELQQTLAQKDQALGKLEQSLRLVE 210 220 230 240 250 260 200 210 220 230 240 250 FLJ003 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EASYDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH 270 280 290 300 310 320 260 270 280 290 300 310 FLJ003 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|119 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLNSASFQRPQSETNVA 330 340 350 360 370 380 320 330 340 350 FLJ003 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST :::::::::.::::::::::::::::.::.:.:.: gi|119 SGCPLFFPLNKLQSPKHAYVKDDTMFVKCVVDTNT 390 400 410 >>gi|109469766|ref|XP_001080233.1| PREDICTED: similar to (480 aa) initn: 1804 init1: 1804 opt: 1804 Z-score: 2158.1 bits: 408.3 E(): 1.7e-111 Smith-Waterman score: 1804; 89.474% identity (96.711% similar) in 304 aa overlap (47-350:176-479) 20 30 40 50 60 70 FLJ003 LRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMAL :.::: :::: .:.::. : .: :.:::: gi|109 AEAGIVCPFAGVGCSFKGSPQSVQEHEATSQSSHLYLLLGVLKEWKSSPGPNLGSAPMAL 150 160 170 180 190 200 80 90 100 110 120 130 FLJ003 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV :::::.:::: ::::.:::::::::::: ::::::::::..::::::.:: ::::: ::: gi|109 EQNLSELQLQEAVEVTGDLEVDCYRAPCCESQEELALQHLLKEKLLAQLEEKLRVFANIV 210 220 230 240 250 260 140 150 160 170 180 190 FLJ003 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME :::::::::::::::.::::::::::..:.:::::::::::::::::.:::::.:::::: gi|109 AVLNKEVEASHLALAASIHQSQLDREHVLNLEQRVVELQQTLAQKDQVLGKLEHSLRLME 270 280 290 300 310 320 200 210 220 230 240 250 FLJ003 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH ::::::::::::::::.:::::.:::::::::::::::::::::::::::::::.::.:: gi|109 EASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTH 330 340 350 360 370 380 260 270 280 290 300 310 FLJ003 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA 390 400 410 420 430 440 320 330 340 350 FLJ003 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST :::::::::::::::::::::::::::::::.:: gi|109 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 450 460 470 480 >>gi|26325122|dbj|BAC26315.1| unnamed protein product [M (409 aa) initn: 1797 init1: 1797 opt: 1797 Z-score: 2150.7 bits: 406.7 E(): 4.3e-111 Smith-Waterman score: 1797; 89.474% identity (97.039% similar) in 304 aa overlap (47-350:105-408) 20 30 40 50 60 70 FLJ003 LRLELGAPLQVSAAPSREAHSLCKSMRSPPQTSHLNLLLGFMKQWKARLGCGLESGPMAL :.::: :::. .:.::. : .: :.:::: gi|263 AEAEIMCPFAGVGCSFKGSPQSMQEHEATSQSSHLYLLLAVLKEWKSSPGSNLGSAPMAL 80 90 100 110 120 130 80 90 100 110 120 130 FLJ003 EQNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHFMKEKLLAELEGKLRVFENIV :.:::.::::::::..:::::::::::: ::::::::::..::::::.:: ::::: ::: gi|263 ERNLSELQLQAAVEATGDLEVDCYRAPCCESQEELALQHLVKEKLLAQLEEKLRVFANIV 140 150 160 170 180 190 140 150 160 170 180 190 FLJ003 AVLNKEVEASHLALATSIHQSQLDRERILSLEQRVVELQQTLAQKDQALGKLEQSLRLME :::::::::::::::.::::::::::.::::::::::::::::::::.:::::.:::::: gi|263 AVLNKEVEASHLALAASIHQSQLDREHILSLEQRVVELQQTLAQKDQVLGKLEHSLRLME 200 210 220 230 240 250 200 210 220 230 240 250 FLJ003 EASFDGTFLWKITNVTRRCHESACGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGTGKRTH ::::::::::::::::.:::::.:::::::::::::::::::::::::::::::.::.:: gi|263 EASFDGTFLWKITNVTKRCHESVCGRTVSLFSPAFYTAKYGYKLCLRLYLNGDGSGKKTH 260 270 280 290 300 310 260 270 280 290 300 310 FLJ003 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLSSASFQRPQSETNVA 320 330 340 350 360 370 320 330 340 350 FLJ003 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVETST :::::::::::::::::::::::::::::::.:: gi|263 SGCPLFFPLSKLQSPKHAYVKDDTMFLKCIVDTSA 380 390 400 351 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 00:21:10 2009 done: Sat Feb 28 00:27:10 2009 Total Scan time: 823.920 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]