# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj04223.fasta.huge -Q ../query/FLJ00202.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00202, 233 aa
vs ./tmplib.10216 library
2210761 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.8629+/-0.00376; mu= 17.7398+/- 0.254
mean_var=78.3765+/-17.279, 0's: 0 Z-trim: 1 B-trim: 59 in 1/39
Lambda= 0.144871
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1560 ( 662 res) fh19959 ( 662) 348 81.8 8.7e-17
KIAA1706 ( 573 res) fj17179 ( 573) 92 28.3 1
KIAA1624 ( 599 res) fg02331 ( 599) 87 27.2 2.2
KIAA0755 ( 1093 res) hk04532 (1093) 89 28.0 2.3
FLJ00183 ( 227 res) sj01602 ( 227) 82 25.6 2.6
KIAA0198 ( 562 res) ha02521 ( 562) 84 26.6 3.2
KIAA1783 ( 1560 res) fg01285 (1560) 87 27.8 3.7
FLJ00209 ( 358 res) sj05025 ( 358) 79 25.2 5.2
FLJ00324 ( 376 res) sj01157 ( 376) 79 25.3 5.3
FLJ00277 ( 357 res) sh01540 ( 357) 77 24.8 6.9
KIAA1278 ( 1311 res) hg03689(revised) (1311) 82 26.7 6.9
KIAA1845 ( 705 res) fg05317(revised) ( 705) 79 25.7 7.6
KIAA0212 ( 666 res) ha02602 ( 666) 77 25.2 9.8
FLJ00416 ( 221 res) sj04686 ( 221) 72 23.5 11
KIAA1208 ( 950 res) fj07955 ( 950) 77 25.4 12
FLJ00341 ( 2760 res) sf00005 (2760) 81 27.0 12
KIAA1270 ( 986 res) hk06471 ( 986) 77 25.5 12
KIAA0835 ( 1167 res) hj05861 (1167) 77 25.6 13
KIAA1388 ( 599 res) fj06552 ( 599) 74 24.5 14
KIAA0999 ( 1371 res) fj10213 (1371) 77 25.7 15
FLJ00184 ( 580 res) sj01836 ( 580) 73 24.3 16
KIAA2003 ( 460 res) ah02593 ( 460) 72 23.9 16
KIAA0612 ( 1810 res) hg00654s1 (1810) 77 25.8 17
KIAA0124 ( 682 res) ha01534 ( 682) 73 24.4 18
KIAA1042 ( 1019 res) fh02877 (1019) 74 24.9 19
FLJ00076 ( 298 res) as00076 ( 298) 69 23.0 20
KIAA0377 ( 1412 res) hh00412 (1412) 75 25.3 20
FLJ00246 ( 1486 res) sj08543 (1486) 75 25.3 21
KIAA1926 ( 412 res) hh10052 ( 412) 70 23.4 21
KIAA0872 ( 552 res) hk07213 ( 552) 71 23.8 21
KIAA1019 ( 2309 res) fg00188s1 (2309) 76 25.8 23
KIAA1422 ( 1151 res) hk10484(revised) (1151) 73 24.7 24
KIAA0018 ( 553 res) hk07284 ( 553) 70 23.6 24
KIAA1255 ( 1232 res) hh14633s1 (1232) 73 24.8 25
KIAA1351 ( 1243 res) fj01021s1 (1243) 73 24.8 25
KIAA1898 ( 1013 res) fk06427 (1013) 72 24.4 25
FLJ00169 ( 432 res) sh07709 ( 432) 68 23.1 28
KIAA0423 ( 1723 res) hh01239s1 (1723) 73 25.0 30
KIAA1741 ( 1777 res) fh23254 (1777) 73 25.0 30
KIAA1976 ( 351 res) fg02988 ( 351) 66 22.5 33
KIAA0707 ( 630 res) hh00286(revised) ( 630) 68 23.3 35
KIAA1400 ( 1093 res) hk08136 (1093) 70 24.1 35
KIAA0788 ( 2026 res) hk05526s2 (2026) 72 24.9 37
KIAA0360 ( 1019 res) hh00062s1 (1019) 69 23.8 39
KIAA1873 ( 477 res) hk07219 ( 477) 66 22.7 40
FLJ00207 ( 288 res) sj04935 ( 288) 64 22.0 40
FLJ00362 ( 638 res) sh04538 ( 638) 67 23.1 40
KIAA0732 ( 1449 res) fg05988b (1449) 70 24.2 41
FLJ00075 ( 183 res) as00075 ( 183) 62 21.3 41
KIAA1461 ( 1498 res) fh17578 (1498) 70 24.3 42
>>KIAA1560 ( 662 res) fh19959 (662 aa)
initn: 262 init1: 223 opt: 348 Z-score: 394.7 bits: 81.8 E(): 8.7e-17
Smith-Waterman score: 348; 35.326% identity (66.848% similar) in 184 aa overlap (31-212:313-494)
10 20 30 40 50 60
FLJ002 EDLLDHGGTRLLGLNLTSISTPRPTPASVGSSAVMSTAIMATLLLFKHQKGVFLSQLLGE
: :.::: :.: :::..:..:. :: :. .
KIAA15 INESRNATDESLRRRLIANLAEHILFTASKSCAIMSTHIVACLLLYRHRQGIDLSTLVED
290 300 310 320 330 340
70 80 90 100 110
FLJ002 FSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGD-LLVVPQPG-PGLTH
: . ::.: : ::.::::. .....:...:: :.. . ..: ....:. :.. .
KIAA15 FFVMKEEVLARDFDLGFSGNSEDVVMHAIQLLGNCVTITHTSRNDEFFITPSTTVPSVFE
350 360 370 380 390 400
120 130 140 150 160 170
FLJ002 LAQLSAELLPVFLSEAVGACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLL
: : .: ::. ::. ::.. ..: : :: :. ::..: :. : .::
KIAA15 LNFYSNGVLHVFIMEAIIACSLYAVLNKR-GLGGPTSTPPNLI-SQEQLVRKAASLCYLL
410 420 430 440 450 460
180 190 200 210 220 230
FLJ002 PQDLLLLKPCQSSYCYCQEVLDRLIQCGLLVAEEVGRAVGDKILAWSLASSSLPP
.. . :::. : :.:.. ..:: :.:.. :
KIAA15 SNEGTISLPCQTFYQVCHETVGKFIQYGILTVAEHDDQEDISPSLAEQQWDKKLPEPLSW
470 480 490 500 510 520
KIAA15 RSDEEDEDSDFGEEQRDCYLKVSQSKEHQQFITFLQRLLGPLLEAYSSAAIFVHNFSGPV
530 540 550 560 570 580
>>KIAA1706 ( 573 res) fj17179 (573 aa)
initn: 67 init1: 44 opt: 92 Z-score: 106.2 bits: 28.3 E(): 1
Smith-Waterman score: 92; 24.870% identity (49.741% similar) in 193 aa overlap (21-201:138-309)
10 20 30 40
FLJ002 EDLLDHGGTRLLGLNLTSISTPR-----PTPASVGSSAVMSTAIMATLLL
::: :::.. : .: . ...
KIAA17 GSSAQHSPSSLRRDLLAEQQPHHLATAVPLTPRVNINTATPAQLMSVRGLSEKMALSIVD
110 120 130 140 150 160
50 60 70 80 90 100
FLJ002 FKHQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGD
:....: : : . . . . :....: ..: :.. :.. . .:
KIAA17 FRREHGPFRS--------VEDLVRMDGINAAFLDRIR----HQVFAERSRPPSTHT-NGG
170 180 190 200 210
110 120 130 140 150
FLJ002 LLVVPQPGPGLTHLAQLSAEL-LPV-----FLSEAVGACAVRGLLAGR-VPPQGPWELQG
: . .: :. : :. : .: :: ..: .. : : :: : . :.:::
KIAA17 LTFTAKPHPSPTSLSLQSEDLDLPPGGPTQIISTRPSVEAFGGTRDGRPVLRLATWNLQG
220 230 240 250 260 270
160 170 180 190 200 210
FLJ002 ILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQEVLDRLIQCGLLVAEEVGRAVG
. . :. . .. : :: ... :: ::.:::
KIAA17 CSVEKANNPGVREVVCMTLLENSIKLLA--------VQELLDREALEKFCTELNQPTLPN
280 290 300 310 320
220 230
FLJ002 DKILAWSLASSSLPP
KIAA17 IRKWKGPRGCWKAVVAEKPSNQLQKGAGYAGFLWDAAAGMELRDAGSQESSPSNGHGKLA
330 340 350 360 370 380
>>KIAA1624 ( 599 res) fg02331 (599 aa)
initn: 86 init1: 61 opt: 87 Z-score: 100.3 bits: 27.2 E(): 2.2
Smith-Waterman score: 87; 26.712% identity (56.164% similar) in 146 aa overlap (14-155:463-596)
10 20 30 40
FLJ002 EDLLDHGGTRLLGLNLTSISTPRPTPASVGSSAVMSTAI-MAT
:.: . : : ::::.. : ...:: .:
KIAA16 GKGDSMGPLQQRANLRAGSRIESRHFARADLELLASSCP---PASVSQRAGITAAINLAK
440 450 460 470 480
50 60 70 80 90 100
FLJ002 LLLFKHQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQ-LRSLLQHSLSLLRAHVALLRI
: ::.: ... . :. . .::. . : :. . : .::... .:. .. ..
KIAA16 LKLFRHYYVLIVCYIY--FTRIIA-FLLK-LAVPFQWKWLYQLLDETATLVFFVLTGYKF
490 500 510 520 530 540
110 120 130 140 150
FLJ002 RQGDLLVVPQPGPGLTHLAQLSAELLPVFLSEAV--GACAVRGLLAGRVPPQGPWELQGI
: .. .: :.. . . :. : . .: . :. . : : ::: ::
KIAA16 RPAS----DNPYLQLSQ-EEEDLEMESVVTTSGVMESMKKVKKVTNGSVEPQGEWEGAV
550 560 570 580 590
160 170 180 190 200 210
FLJ002 LLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQEVLDRLIQCGLLVAEEVGRAVGD
>>KIAA0755 ( 1093 res) hk04532 (1093 aa)
initn: 102 init1: 69 opt: 89 Z-score: 100.0 bits: 28.0 E(): 2.3
Smith-Waterman score: 89; 36.538% identity (53.846% similar) in 52 aa overlap (110-153:76-127)
80 90 100 110 120 130
FLJ002 QLRSLLQHSLSLLRAHVALLRIRQGDLLVVPQPGPGLT-----HLAQLSAELLPVFLSEA
:::: ::. : .. : :. . .
KIAA07 GTDFFCRIILWNDIFIMSQQGYVATPPYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKP
50 60 70 80 90 100
140 150 160 170 180 190
FLJ002 ---VGACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSS
.:: :.::.: :: ::
KIAA07 AGPLGATATRGMLPPGPPPPGPHQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSA
110 120 130 140 150 160
>>FLJ00183 ( 227 res) sj01602 (227 aa)
initn: 53 init1: 53 opt: 82 Z-score: 98.9 bits: 25.6 E(): 2.6
Smith-Waterman score: 82; 32.394% identity (57.746% similar) in 71 aa overlap (145-210:20-88)
120 130 140 150 160 170
FLJ002 GLTHLAQLSAELLPVFLSEAVGACAVRGLLAGRVPPQG--PWELQGILLLSQNELYRQIL
:. .: .: : ::.:. ..:: .:
FLJ001 KMAAAAAAAGAAGSAAPAAAAGAPGSGGAPSGSQGVLI--GDRLYSGVL
10 20 30 40
180 190 200 210 220
FLJ002 LLMH--LLPQDLLLLKPCQSSYCYCQEVLD-RLIQCGLLVAEEVGRAVGDKILAWSLASS
. .. :::.: : . : .:: . : :.. : :. :
FLJ001 ITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLF
50 60 70 80 90 100
230
FLJ002 SLPP
FLJ001 QRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQLRDKKKPVPLLLD
110 120 130 140 150 160
>>KIAA0198 ( 562 res) ha02521 (562 aa)
initn: 45 init1: 45 opt: 84 Z-score: 97.2 bits: 26.6 E(): 3.2
Smith-Waterman score: 84; 30.769% identity (51.282% similar) in 78 aa overlap (110-181:448-525)
80 90 100 110 120 130
FLJ002 QLRSLLQHSLSLLRAHVALLRIRQGDLLVVPQPGPGLTHLAQLSAELLPVFLSEAVGACA
:::. . . : . :. ::::. :
KIAA01 DKLPKVEVDSFLAELPGSLSLSSAEPQPASPQPAAAAALLDEALLAKSPANLSEALCAAN
420 430 440 450 460 470
140 150 160 170 180 190
FLJ002 VR-----GLLAGRVPPQGPWELQGILLLSQNELYRQILLL-MHLLPQDLLLLKPCQSSYC
: :.: .:: .: : :... .. : :: .. :::
KIAA01 VDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPLLTTLQAQPQDSPGAGGPLNFGP
480 490 500 510 520 530
200 210 220 230
FLJ002 YCQEVLDRLIQCGLLVAEEVGRAVGDKILAWSLASSSLPP
KIAA01 LHSLPPVFTSGLSSTTLPRFHQAFQ
540 550 560
>>KIAA1783 ( 1560 res) fg01285 (1560 aa)
initn: 92 init1: 59 opt: 87 Z-score: 96.2 bits: 27.8 E(): 3.7
Smith-Waterman score: 87; 23.664% identity (49.618% similar) in 131 aa overlap (65-185:798-928)
40 50 60 70 80 90
FLJ002 MSTAIMATLLLFKHQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQL-RSLLQHSLSLLR
: :. : :: :. . ... .:: :.
KIAA17 AIPLAPGIQAPSLPPGPPPGPAPTLPSRDHTGEVQRSGSLDGFLDQIFQPVISSGLSDLE
770 780 790 800 810 820
100 110 120 130 140
FLJ002 AHVALL-RIRQGDLLVVPQPG-----PGLTHLAQLSAELLPVFLSEAVGACAVRGLLAGR
:: :.. : . : : ::. .. . ..:. . . .: .. :
KIAA17 QSWALSSRMKGGGAIGPTQQGYPMVYPGMIQMPAYQPGMVPAPMPMMPAMGTVPAMPAMV
830 840 850 860 870 880
150 160 170 180 190 200
FLJ002 VPPQGPW---ELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQEVLDRLIQ
:::: : . . . .:: . .: :.: . . . . :
KIAA17 VPPQPPLPSLDAGQLAVQQQNFIQQQALILAQQMTAQAMSLSLEQQMQQRQQQARASEAA
890 900 910 920 930 940
210 220 230
FLJ002 CGLLVAEEVGRAVGDKILAWSLASSSLPP
KIAA17 SQASPSAVTSKPRKPPTPPEKPQRDLGSEGGCLRETSEEAEDRPYQPKSFQQKRNYFQRM
950 960 970 980 990 1000
>>FLJ00209 ( 358 res) sj05025 (358 aa)
initn: 96 init1: 49 opt: 79 Z-score: 93.5 bits: 25.2 E(): 5.2
Smith-Waterman score: 79; 37.500% identity (53.125% similar) in 64 aa overlap (104-157:268-331)
80 90 100 110 120 130
FLJ002 DVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLLVVPQ-PGPGLTHLAQLSAELLPVF--
: :. :. :::. .:: : : :
FLJ002 PARLSCLSKNLNYDTFGLAVPSTLPAGPEIGPRLLGPEAPGPSGIRLAISMATWLRVEPR
240 250 260 270 280 290
140 150 160 170 180
FLJ002 LSEAVGACAVRGLLAGRVPPQ-------GPWELQGILLLSQNELYRQILLLMHLLPQDLL
::.. .: ::::. :: :::.:.
FLJ002 TSEVLWRPLTRLSLAGRASPQEPGQPCCGPWRLHWSAGSLPWPRGWRGRERSSRLRRRRW
300 310 320 330 340 350
190 200 210 220 230
FLJ002 LLKPCQSSYCYCQEVLDRLIQCGLLVAEEVGRAVGDKILAWSLASSSLPP
FLJ002 S
>>FLJ00324 ( 376 res) sj01157 (376 aa)
initn: 91 init1: 69 opt: 79 Z-score: 93.3 bits: 25.3 E(): 5.3
Smith-Waterman score: 79; 33.333% identity (60.317% similar) in 63 aa overlap (97-159:144-204)
70 80 90 100 110 120
FLJ002 EILLRGFDVGFSGQLRSLLQHSLSLLRAHVALLRIRQGDLLVVPQPGPGLTHLAQLSAEL
:.:. .:. ::.. : :::: .: ..:..
FLJ003 ALRRMQQMAGHLGAFHPAPLPLGACGAYTTAILQ-HQAALLAAAQ-GPGLGPVAAVAAQM
120 130 140 150 160 170
130 140 150 160 170 180
FLJ002 LPVFLSEAVGACAVRGLLAGRVPPQGPWELQGILLLSQNELYRQILLLMHLLPQDLLLLK
: :.: . . :. : .:: : :.
FLJ003 QHVAAFSLVAAPLLPAAAANSPPGSGPGTLPGLPAPIGVNGFGPLTPQTNGQPGSDTLYN
180 190 200 210 220 230
190 200 210 220 230
FLJ002 PCQSSYCYCQEVLDRLIQCGLLVAEEVGRAVGDKILAWSLASSSLPP
FLJ003 NGLSPYPAQSPGVADPLQQAYAGMHHYAAAYPSAYAPVSTAFPQQPSALPQQQREGPEGC
240 250 260 270 280 290
>>FLJ00277 ( 357 res) sh01540 (357 aa)
initn: 70 init1: 46 opt: 77 Z-score: 91.3 bits: 24.8 E(): 6.9
Smith-Waterman score: 77; 31.111% identity (46.667% similar) in 90 aa overlap (77-153:159-241)
50 60 70 80 90
FLJ002 KHQKGVFLSQLLGEFSWLTEEILLRGFDVGFSGQLRSL--------LQHSLSLLRAH---
:.:: :: .:::. . :
FLJ002 AICCHTSTSKRHWLRFFYLYHFAFYAYHYRFNGQYSSLALVTSWLFIQHSMIYFFHHYEL
130 140 150 160 170 180
100 110 120 130 140 150
FLJ002 -VALLRIR-QGDLLVVPQPGPGLTHLAQLSAELLPVFLSEAVGACAVRGLLAGRVPPQGP
. : ..: : :: .: ::: . :: ... :: :. ::. : ::
FLJ002 PAILQQVRIQEMLLQAPPLGPG-------TPTALPDDMNNNSGAPATAPDSAGQPPALGP
190 200 210 220 230 240
160 170 180 190 200 210
FLJ002 WELQGILLLSQNELYRQILLLMHLLPQDLLLLKPCQSSYCYCQEVLDRLIQCGLLVAEEV
FLJ002 VSPGASGSPGPVAAAPSSLVAAAASVAAAAGGDLGWMAETAAIITDASFLSGLSASLLER
250 260 270 280 290 300
233 residues in 1 query sequences
2210761 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:44:33 2009 done: Fri Feb 27 10:44:33 2009
Total Scan time: 0.410 Total Display time: 0.030
Function used was FASTA [version 34.26.5 April 26, 2007]