# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj04110.fasta.nr -Q ../query/FLJ00201.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00201, 705 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7771726 sequences Expectation_n fit: rho(ln(x))= 7.4305+/-0.000223; mu= 1.8388+/- 0.012 mean_var=197.4223+/-38.104, 0's: 35 Z-trim: 217 B-trim: 419 in 1/66 Lambda= 0.091280 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676606|dbj|BAB84955.1| FLJ00201 protein [Homo ( 705) 5240 703.1 8.3e-200 gi|45644957|sp|P25067.2|CO8A2_HUMAN RecName: Full= ( 703) 5227 701.4 2.7e-199 gi|114555733|ref|XP_001158595.1| PREDICTED: simila ( 921) 5195 697.3 6.1e-198 gi|109002024|ref|XP_001102808.1| PREDICTED: simila ( 732) 5175 694.6 3.2e-197 gi|194207696|ref|XP_001499169.2| PREDICTED: simila ( 706) 5055 678.8 1.8e-192 gi|73620951|sp|P25318.2|CO8A2_MOUSE RecName: Full= ( 699) 4999 671.4 3e-190 gi|119890491|ref|XP_587009.3| PREDICTED: collagen, ( 928) 4988 670.1 9.8e-190 gi|109475482|ref|XP_233542.4| PREDICTED: similar t ( 699) 4983 669.3 1.3e-189 gi|66365802|gb|AAH96297.1| COL8A2 protein [Homo sa ( 657) 4795 644.5 3.5e-182 gi|177179|gb|AAA62822.1| alpha-2 type VIII collage ( 635) 4668 627.8 3.7e-177 gi|47847462|dbj|BAD21403.1| mFLJ00201 protein [Mus ( 640) 4640 624.1 4.8e-176 gi|126330372|ref|XP_001380691.1| PREDICTED: simila ( 701) 4378 589.6 1.2e-165 gi|118101638|ref|XP_425780.2| PREDICTED: similar t ( 639) 3967 535.5 2.3e-149 gi|51327195|gb|AAH80317.1| Col8a2 protein [Mus mus ( 643) 3751 507.0 8.4e-141 gi|1083016|pir||A24450 collagen alpha 2(VIII) chai ( 469) 3433 465.0 2.7e-128 gi|94733770|emb|CAK04362.1| novel protein similar ( 686) 3178 431.6 4.5e-118 gi|148698346|gb|EDL30293.1| procollagen, type VIII ( 387) 2770 377.6 4.6e-102 gi|194222913|ref|XP_001503585.2| PREDICTED: simila ( 735) 2695 368.0 6.7e-99 gi|115317|sp|P14282.1|CO8A1_RABIT RecName: Full=Co ( 744) 2680 366.0 2.6e-98 gi|194040932|ref|XP_001926478.1| PREDICTED: collag ( 744) 2678 365.8 3.2e-98 gi|82207857|sp|Q7LZR2.1|CO8A1_CHICK RecName: Full= ( 744) 2671 364.9 6e-98 gi|148665760|gb|EDK98176.1| procollagen, type VIII ( 743) 2670 364.7 6.6e-98 gi|15029694|gb|AAH11061.1| Collagen, type VIII, al ( 744) 2670 364.7 6.6e-98 gi|125987814|sp|Q00780.3|CO8A1_MOUSE RecName: Full ( 744) 2670 364.7 6.6e-98 gi|148665761|gb|EDK98177.1| procollagen, type VIII ( 774) 2670 364.8 6.8e-98 gi|12858613|dbj|BAB31383.1| unnamed protein produc ( 744) 2669 364.6 7.2e-98 gi|95768840|gb|ABF57386.1| alpha 1 type VIII colla ( 745) 2665 364.1 1e-97 gi|154757532|gb|AAI51645.1| COL8A1 protein [Bos ta ( 745) 2665 364.1 1e-97 gi|74197971|dbj|BAE35169.1| unnamed protein produc ( 744) 2663 363.8 1.2e-97 gi|149445082|ref|XP_001519044.1| PREDICTED: simila ( 826) 2659 363.3 1.9e-97 gi|74002546|ref|XP_545072.2| PREDICTED: similar to ( 810) 2655 362.8 2.7e-97 gi|114588160|ref|XP_001141952.1| PREDICTED: simila ( 744) 2654 362.6 2.8e-97 gi|50729642|ref|XP_416597.1| PREDICTED: hypothetic ( 739) 2651 362.2 3.7e-97 gi|49176531|gb|AAT52220.1| cell proliferation-indu ( 745) 2647 361.7 5.4e-97 gi|149060311|gb|EDM11025.1| procollagen, type VIII ( 743) 2644 361.3 7.1e-97 gi|21903375|sp|P27658.2|CO8A1_HUMAN RecName: Full= ( 744) 2644 361.3 7.1e-97 gi|30584331|gb|AAP36414.1| Homo sapiens collagen, ( 745) 2644 361.3 7.1e-97 gi|126325668|ref|XP_001371063.1| PREDICTED: simila ( 740) 2628 359.2 3e-96 gi|1359953|emb|CAA47387.1| collagen [Mus musculus] ( 743) 2619 358.0 6.9e-96 gi|30082|emb|CAA40748.1| alpha 1(VIII) collagen [H ( 744) 2615 357.5 1e-95 gi|94734336|emb|CAK05034.1| novel protein similar ( 731) 2560 350.2 1.5e-93 gi|189535461|ref|XP_690914.3| PREDICTED: similar t ( 733) 2560 350.2 1.5e-93 gi|115326|sp|P08125.4|COAA1_CHICK RecName: Full=Co ( 674) 2540 347.6 8.8e-93 gi|169154444|emb|CAQ14993.1| novel protein similar ( 711) 2506 343.1 2e-91 gi|30095|emb|CAA42933.1| collagen subunit (alpha-1 ( 680) 2504 342.8 2.4e-91 gi|560151|emb|CAA46236.1| alpha1(X)collagen [Homo ( 629) 2503 342.7 2.4e-91 gi|2506306|sp|Q03692.2|COAA1_HUMAN RecName: Full=C ( 680) 2503 342.7 2.6e-91 gi|114608999|ref|XP_001161548.1| PREDICTED: simila ( 680) 2502 342.6 2.8e-91 gi|209484159|gb|ACI47556.1| collagen type VIII alp ( 711) 2491 341.1 8e-91 gi|47214403|emb|CAG00884.1| unnamed protein produc ( 977) 2486 340.6 1.6e-90 >>gi|18676606|dbj|BAB84955.1| FLJ00201 protein [Homo sap (705 aa) initn: 5240 init1: 5240 opt: 5240 Z-score: 3743.4 bits: 703.1 E(): 8.3e-200 Smith-Waterman score: 5240; 100.000% identity (100.000% similar) in 705 aa overlap (1-705:1-705) 10 20 30 40 50 60 FLJ002 DAMLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 DAMLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFRE 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQ 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 GVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK 250 260 270 280 290 300 310 320 330 340 350 360 FLJ002 GEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG 310 320 330 340 350 360 370 380 390 400 410 420 FLJ002 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG 370 380 390 400 410 420 430 440 450 460 470 480 FLJ002 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG 430 440 450 460 470 480 490 500 510 520 530 540 FLJ002 LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE 490 500 510 520 530 540 550 560 570 580 590 600 FLJ002 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL 550 560 570 580 590 600 610 620 630 640 650 660 FLJ002 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ 610 620 630 640 650 660 670 680 690 700 FLJ002 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT ::::::::::::::::::::::::::::::::::::::::::::: gi|186 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 670 680 690 700 >>gi|45644957|sp|P25067.2|CO8A2_HUMAN RecName: Full=Coll (703 aa) initn: 5227 init1: 5227 opt: 5227 Z-score: 3734.1 bits: 701.4 E(): 2.7e-199 Smith-Waterman score: 5227; 100.000% identity (100.000% similar) in 703 aa overlap (3-705:1-703) 10 20 30 40 50 60 FLJ002 DAMLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 MLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFRE 10 20 30 40 50 70 80 90 100 110 120 FLJ002 GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG 60 70 80 90 100 110 130 140 150 160 170 180 FLJ002 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQ 120 130 140 150 160 170 190 200 210 220 230 240 FLJ002 GVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 GVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK 180 190 200 210 220 230 250 260 270 280 290 300 FLJ002 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK 240 250 260 270 280 290 310 320 330 340 350 360 FLJ002 GEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 GEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG 300 310 320 330 340 350 370 380 390 400 410 420 FLJ002 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG 360 370 380 390 400 410 430 440 450 460 470 480 FLJ002 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG 420 430 440 450 460 470 490 500 510 520 530 540 FLJ002 LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE 480 490 500 510 520 530 550 560 570 580 590 600 FLJ002 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL 540 550 560 570 580 590 610 620 630 640 650 660 FLJ002 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|456 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ 600 610 620 630 640 650 670 680 690 700 FLJ002 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT ::::::::::::::::::::::::::::::::::::::::::::: gi|456 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 660 670 680 690 700 >>gi|114555733|ref|XP_001158595.1| PREDICTED: similar to (921 aa) initn: 5195 init1: 5195 opt: 5195 Z-score: 3709.9 bits: 697.3 E(): 6.1e-198 Smith-Waterman score: 5195; 99.007% identity (99.149% similar) in 705 aa overlap (1-705:217-921) 10 20 30 FLJ002 DAMLGTLTPLSSLLLLLLVLVLGCGPRASS ::: ::::: :::::::::::::::::::: gi|114 ELSSWALDPPPSPFPDLAELLRHCPGSTSTDAMRGTLTPPSSLLLLLLVLVLGCGPRASS 190 200 210 220 230 240 40 50 60 70 80 90 FLJ002 GGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPR 250 260 270 280 290 300 100 110 120 130 140 150 FLJ002 GPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGI ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|114 GPPGPPGFPGKPGTGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGI 310 320 330 340 350 360 160 170 180 190 200 210 FLJ002 RGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDN 370 380 390 400 410 420 220 230 240 250 260 270 FLJ002 GVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGA ::::::::::::::::::::::::: : : :::::::::::::::::::::::::::::: gi|114 GVGQPGLPGAPGQGGAPGPPGLPGPXGXGXPGLDGLPGAPGDKGESGPPGVPGPRGEPGA 430 440 450 460 470 480 280 290 300 310 320 330 FLJ002 VGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRG :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|114 VGPKGPPGVDGVGIPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRG 490 500 510 520 530 540 340 350 360 370 380 390 FLJ002 PAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPG 550 560 570 580 590 600 400 410 420 430 440 450 FLJ002 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKG 610 620 630 640 650 660 460 470 480 490 500 510 FLJ002 DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGP 670 680 690 700 710 720 520 530 540 550 560 570 FLJ002 PGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGE 730 740 750 760 770 780 580 590 600 610 620 630 FLJ002 LSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHV 790 800 810 820 830 840 640 650 660 670 680 690 FLJ002 KGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYST 850 860 870 880 890 900 700 FLJ002 EYIHSSFSGFLLCPT ::::::::::::::: gi|114 EYIHSSFSGFLLCPT 910 920 >>gi|109002024|ref|XP_001102808.1| PREDICTED: similar to (732 aa) initn: 5120 init1: 5120 opt: 5175 Z-score: 3696.9 bits: 694.6 E(): 3.2e-197 Smith-Waterman score: 5175; 98.865% identity (99.291% similar) in 705 aa overlap (1-705:30-732) 10 20 30 FLJ002 DAMLGTLTPLSSLLLLLLVLVLGCGPRASSG ::: :::::::::::::::: ::::::::: gi|109 MTGTFGYRQASKEASSQFPKCREGRITSADAMRGTLTPLSSLLLLLLVL--GCGPRASSG 10 20 30 40 50 40 50 60 70 80 90 FLJ002 GGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRG 60 70 80 90 100 110 100 110 120 130 140 150 FLJ002 PPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIR :::::::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPGPPGFPGKPGTGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIR 120 130 140 150 160 170 160 170 180 190 200 210 FLJ002 GDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 GDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDHG 180 190 200 210 220 230 220 230 240 250 260 270 FLJ002 VGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAV ::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::: gi|109 VGQPGLPGAPGQGGAPGPPGLPGAAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAV 240 250 260 270 280 290 280 290 300 310 320 330 FLJ002 GPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGP 300 310 320 330 340 350 340 350 360 370 380 390 FLJ002 AGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGV 360 370 380 390 400 410 400 410 420 430 440 450 FLJ002 PGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGD :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|109 PGIRGDQGPSGLAGKPGLPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGD 420 430 440 450 460 470 460 470 480 490 500 510 FLJ002 LGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPP ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|109 LGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGKAGEPGTAGPTGPP 480 490 500 510 520 530 520 530 540 550 560 570 FLJ002 GVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGEL 540 550 560 570 580 590 580 590 600 610 620 630 FLJ002 SAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVK 600 610 620 630 640 650 640 650 660 670 680 690 FLJ002 GTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTE 660 670 680 690 700 710 700 FLJ002 YIHSSFSGFLLCPT :::::::::::::: gi|109 YIHSSFSGFLLCPT 720 730 >>gi|194207696|ref|XP_001499169.2| PREDICTED: similar to (706 aa) initn: 5023 init1: 5023 opt: 5055 Z-score: 3611.7 bits: 678.8 E(): 1.8e-192 Smith-Waterman score: 5055; 95.892% identity (98.442% similar) in 706 aa overlap (3-705:1-706) 10 20 30 40 50 FLJ002 DAMLGTLTPLSSLLL---LLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPP : :.::::::: : :::.:::::: .:..:::.::::::::::: ::::::::::: gi|194 MRGALTPLSSLPLPPLLLLLLVLGCGLQAATGGGTGGAAGYAPVKYAQPMQKGPVGPP 10 20 30 40 50 60 70 80 90 100 110 FLJ002 FREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAG :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|194 FREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGLHGQPGPAG 60 70 80 90 100 110 120 130 140 150 160 170 FLJ002 PPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKP ::::::::::::::::::::::::::::::::::::::::::::::::::::::..:::: gi|194 PPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGIAVPGKP 120 130 140 150 160 170 180 190 200 210 220 230 FLJ002 GAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAG : ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GPQGVPGPPGFGGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAG 180 190 200 210 220 230 240 250 260 270 280 290 FLJ002 LGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPS :::::::::::.:::::::::::::::::::::.::::::::::::::::::.::::::. gi|194 LGKPGLDGLPGVPGDKGESGPPGVPGPRGEPGALGPKGPPGVDGVGVPGAAGVPGPQGPA 240 250 260 270 280 290 300 310 320 330 340 350 FLJ002 GAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQG :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GAKGEPGTRGLPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQG 300 310 320 330 340 350 360 370 380 390 400 410 FLJ002 LGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPG 360 370 380 390 400 410 420 430 440 450 460 470 FLJ002 AHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 AHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIG 420 430 440 450 460 470 480 490 500 510 520 530 FLJ002 PQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGA ::::::::::::::::::::..::::.::::::::::::::.:::::::::::::::::: gi|194 PQGLPGLKGEPGLPGPPGEGKVGEPGVAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGA 480 490 500 510 520 530 540 550 560 570 580 590 FLJ002 FDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFD :.:::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FEETGIAGLQLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFD 540 550 560 570 580 590 600 610 620 630 640 650 FLJ002 RTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGY 600 610 620 630 640 650 660 670 680 690 700 FLJ002 LDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT :::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 660 670 680 690 700 >>gi|73620951|sp|P25318.2|CO8A2_MOUSE RecName: Full=Coll (699 aa) initn: 4973 init1: 4973 opt: 4999 Z-score: 3571.9 bits: 671.4 E(): 3e-190 Smith-Waterman score: 4999; 94.310% identity (98.009% similar) in 703 aa overlap (3-705:1-699) 10 20 30 40 50 60 FLJ002 DAMLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFRE : :.: :: ::::::: :::::.:::::::::::::::::.:::::::::::::: gi|736 MQGALMPLPSLLLLLL----GCGPRVSSGGGAGGAAGYAPVKYVQPMQKGPVGPPFRE 10 20 30 40 50 70 80 90 100 110 120 FLJ002 GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG :::::::::::.::::::::::::::::::::::::::::::: ::::.::::::::::: gi|736 GKGQYLEMPLPMLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGVHGQPGPAGPPG 60 70 80 90 100 110 130 140 150 160 170 180 FLJ002 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQ ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|736 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITVPGKPGAQ 120 130 140 150 160 170 190 200 210 220 230 240 FLJ002 GVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK :.::::::.::::::::::: ::::::::::::::::::::::.:::::::::::::::: gi|736 GAPGPPGFRGEPGPQGEPGPRGDRGLKGDNGVGQPGLPGAPGQAGAPGPPGLPGPAGLGK 180 190 200 210 220 230 250 260 270 280 290 300 FLJ002 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK :::::.::::::::.:::::::: :::::::::::::::::::.:::::.:::::: ::: gi|736 PGLDGIPGAPGDKGDSGPPGVPGSRGEPGAVGPKGPPGVDGVGIPGAAGVPGPQGPVGAK 240 250 260 270 280 290 310 320 330 340 350 360 FLJ002 GEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG :::: :::::::::.:::::: :::::::::.:.::::::::::::::.::::::::::: gi|736 GEPGLRGPPGLIGPVGYGMPGKPGPKGDRGPVGAPGLLGDRGEPGEDGKPGEQGPQGLGG 300 310 320 330 340 350 370 380 390 400 410 420 FLJ002 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG :::::::::::::::::: :::.:::::::::::::::::.:::::::.::::::::::: gi|736 PPGLPGSAGLPGRRGPPGSKGEVGPGGPPGVPGIRGDQGPNGLAGKPGLPGERGLPGAHG 360 370 380 390 400 410 430 440 450 460 470 480 FLJ002 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG 420 430 440 450 460 470 490 500 510 520 530 540 FLJ002 LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE :::::::::::::::::..::::.::::::::::::::.::::::::::::::::::.:: gi|736 LPGLKGEPGLPGPPGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDE 480 490 500 510 520 530 550 560 570 580 590 600 FLJ002 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|736 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVRFDRTL 540 550 560 570 580 590 610 620 630 640 650 660 FLJ002 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ 600 610 620 630 640 650 670 680 690 700 FLJ002 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT ::::::::::::::::::::::::::::::::::::::::::::: gi|736 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 660 670 680 690 >>gi|119890491|ref|XP_587009.3| PREDICTED: collagen, typ (928 aa) initn: 4942 init1: 4942 opt: 4988 Z-score: 3562.6 bits: 670.1 E(): 9.8e-190 Smith-Waterman score: 4988; 94.193% identity (98.159% similar) in 706 aa overlap (1-705:223-928) 10 20 FLJ002 DAMLGTLTPLSSLLL-LLLVLVLGCGPRAS ::: :.::::::: :::.:.:::: ::. gi|119 ILAGVRRQRAAGGAPEKAANVNQKAVGTPADAMQGALTPLSSLPPPLLLLLLLGCGQRAA 200 210 220 230 240 250 30 40 50 60 70 80 FLJ002 SGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGP ..:::.::::: :..:.:::.::::::::::::::::::::::::::::::::::::::: gi|119 ASGGAAGAAGYPPAQYVQPMHKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGP 260 270 280 290 300 310 90 100 110 120 130 140 FLJ002 RGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPG :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGPPGPPGFPGKPGTGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPG 320 330 340 350 360 370 150 160 170 180 190 200 FLJ002 IRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGD ::::::::::::::::::::::..::::: ::::::::: :::::::::::::::::::. gi|119 IRGDQGLRGPPGPPGLPGPSGIAVPGKPGPQGVPGPPGFGGEPGPQGEPGPPGDRGLKGE 380 390 400 410 420 430 210 220 230 240 250 260 FLJ002 NGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPG :::::::::::::::::::::::::::::::::::::::::::::..::::::::::::: gi|119 NGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGDTGPPGVPGPRGEPG 440 450 460 470 480 490 270 280 290 300 310 320 FLJ002 AVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDR :.::::::::::::.::.::::::::: :::::::::::::::::::::::::::::::: gi|119 ALGPKGPPGVDGVGAPGSAGLPGPQGPPGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDR 500 510 520 530 540 550 330 340 350 360 370 380 FLJ002 GPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPP :::::::::::::::::::::::::::::::::::::::::::::: ::::::.:: ::: gi|119 GPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGVPGPKGETGPIGPP 560 570 580 590 600 610 390 400 410 420 430 440 FLJ002 GVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQK :::::::::::::::::::.::::::::::::::::::::::::::::::::.::::::: gi|119 GVPGIRGDQGPSGLAGKPGLPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGAAGALGQK 620 630 640 650 660 670 450 460 470 480 490 500 FLJ002 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTG ::::::::::::::::::::::::::::::::::::::::::::::::..::::.::::: gi|119 GDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGKVGEPGVAGPTG 680 690 700 710 720 730 510 520 530 540 550 560 FLJ002 PPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLG :::::::::.:::::::::::::::::::::::::::.:::::::::::::: :::.::: gi|119 PPGVPGSPGLTGPPGPPGPPGPPGAPGAFDETGIAGLQLPNGGVEGAVLGKGVKPQLGLG 740 750 760 770 780 790 570 580 590 600 610 620 FLJ002 ELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELSAHATPAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVH 800 810 820 830 840 850 630 640 650 660 670 680 FLJ002 VKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYS 860 870 880 890 900 910 690 700 FLJ002 TEYIHSSFSGFLLCPT :::::::::::::::: gi|119 TEYIHSSFSGFLLCPT 920 >>gi|109475482|ref|XP_233542.4| PREDICTED: similar to pr (699 aa) initn: 4957 init1: 4957 opt: 4983 Z-score: 3560.5 bits: 669.3 E(): 1.3e-189 Smith-Waterman score: 4983; 94.026% identity (98.009% similar) in 703 aa overlap (3-705:1-699) 10 20 30 40 50 60 FLJ002 DAMLGTLTPLSSLLLLLLVLVLGCGPRASSGGGAGGAAGYAPVKYIQPMQKGPVGPPFRE : :.: :: ::::::: :::::.:::::::::::::::::.:::::::::::::: gi|109 MQGALMPLPSLLLLLL----GCGPRVSSGGGAGGAAGYAPVKYVQPMQKGPVGPPFRE 10 20 30 40 50 70 80 90 100 110 120 FLJ002 GKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPG :::::::::::.::::::::::::::::::::::::::::::: ::::.::::::::::: gi|109 GKGQYLEMPLPILPMDLKGEPGPPGKPGPRGPPGPPGFPGKPGTGKPGVHGQPGPAGPPG 60 70 80 90 100 110 130 140 150 160 170 180 FLJ002 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQ :::::::::::::::::::::::::::::::::::.::::::::::::::::.::::::: gi|109 FSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGVRGPPGPPGLPGPSGITVPGKPGAQ 120 130 140 150 160 170 190 200 210 220 230 240 FLJ002 GVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGK :.::::::.::::::::::: ::::::::::::::::::::::.:::::::::::::::: gi|109 GAPGPPGFRGEPGPQGEPGPRGDRGLKGDNGVGQPGLPGAPGQAGAPGPPGLPGPAGLGK 180 190 200 210 220 230 250 260 270 280 290 300 FLJ002 PGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAK ::::::::::::::. ::::::: :::::::::::::::::::.:::::.::::::.::: gi|109 PGLDGLPGAPGDKGDLGPPGVPGSRGEPGAVGPKGPPGVDGVGIPGAAGVPGPQGPAGAK 240 250 260 270 280 290 310 320 330 340 350 360 FLJ002 GEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGG :::: :::::::::.:::::: :::::::::.:.:::::::::::::::::::::::::: gi|109 GEPGLRGPPGLIGPVGYGMPGKPGPKGDRGPVGAPGLLGDRGEPGEDGEPGEQGPQGLGG 300 310 320 330 340 350 370 380 390 400 410 420 FLJ002 PPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHG :::::::::::::::::: :::.:::::::::::::::::.:::::::.::::::::..: gi|109 PPGLPGSAGLPGRRGPPGSKGEVGPGGPPGVPGIRGDQGPNGLAGKPGLPGERGLPGTQG 360 370 380 390 400 410 430 440 450 460 470 480 FLJ002 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQG 420 430 440 450 460 470 490 500 510 520 530 540 FLJ002 LPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDE :::::::::::::::::..::::.::::::::::::::.::::::::::::::::::.:: gi|109 LPGLKGEPGLPGPPGEGKVGEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDE 480 490 500 510 520 530 550 560 570 580 590 600 FLJ002 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVKFDRTL ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 TGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATPAFTAVLTSPFPASGMPVRFDRTL 540 550 560 570 580 590 610 620 630 640 650 660 FLJ002 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQ 600 610 620 630 640 650 670 680 690 700 FLJ002 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT ::::::::::::::::::::::::::::::::::::::::::::: gi|109 ASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT 660 670 680 690 >>gi|66365802|gb|AAH96297.1| COL8A2 protein [Homo sapien (657 aa) initn: 4795 init1: 4795 opt: 4795 Z-score: 3427.0 bits: 644.5 E(): 3.5e-182 Smith-Waterman score: 4795; 100.000% identity (100.000% similar) in 639 aa overlap (67-705:19-657) 40 50 60 70 80 90 FLJ002 AAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPP :::::::::::::::::::::::::::::: gi|663 GRHAGDSDTPVFAAAAATEMPLPLLPMDLKGEPGPPGKPGPRGPPGPP 10 20 30 40 100 110 120 130 140 150 FLJ002 GFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 GFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGL 50 60 70 80 90 100 160 170 180 190 200 210 FLJ002 RGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 RGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPG 110 120 130 140 150 160 220 230 240 250 260 270 FLJ002 LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 LPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGP 170 180 190 200 210 220 280 290 300 310 320 330 FLJ002 PGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 PGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPG 230 240 250 260 270 280 340 350 360 370 380 390 FLJ002 LLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 LLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRG 290 300 310 320 330 340 400 410 420 430 440 450 FLJ002 DQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 DQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPG 350 360 370 380 390 400 460 470 480 490 500 510 FLJ002 QPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 QPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGS 410 420 430 440 450 460 520 530 540 550 560 570 FLJ002 PGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 PGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHAT 470 480 490 500 510 520 580 590 600 610 620 630 FLJ002 PAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 PAFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVW 530 540 550 560 570 580 640 650 660 670 680 690 FLJ002 VALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|663 VALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSS 590 600 610 620 630 640 700 FLJ002 FSGFLLCPT ::::::::: gi|663 FSGFLLCPT 650 >>gi|177179|gb|AAA62822.1| alpha-2 type VIII collagen (635 aa) initn: 3529 init1: 3529 opt: 4668 Z-score: 3336.8 bits: 627.8 E(): 3.7e-177 Smith-Waterman score: 4668; 97.962% identity (98.746% similar) in 638 aa overlap (68-705:1-635) 40 50 60 70 80 90 FLJ002 AGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPG :::::::::::::::::::::: ::::::: gi|177 MPLPLLPMDLKGEPGPPGKPGPWGPPGPPG 10 20 30 100 110 120 130 140 150 FLJ002 FPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLR :::::: ::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|177 FPGKPGHGKPGLHGQPGPAGPPGFSRMGKAGPPGLPGNVGPPGQPGLRGEPGIRGDQGLR 40 50 60 70 80 90 160 170 180 190 200 210 FLJ002 GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|177 GPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGL 100 110 120 130 140 150 220 230 240 250 260 270 FLJ002 PGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|177 PGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP 160 170 180 190 200 210 280 290 300 310 320 330 FLJ002 GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|177 GVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGL 220 230 240 250 260 270 340 350 360 370 380 390 FLJ002 LGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGD :::::::::::.::::::::::::::::::::::::::::: .::::::::::::::::: gi|177 LGDRGEPGEDGDPGEQGPQGLGGPPGLPGSAGLPGRRGPPGLRGEAGPGGPPGVPGIRGD 280 290 300 310 320 330 400 410 420 430 440 450 FLJ002 QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|177 QGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQ 340 350 360 370 380 390 460 470 480 490 500 510 FLJ002 PGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSP :::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|177 PGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGRAGEPGTAGPRGPPGVPGSP 400 410 420 430 440 450 520 530 540 550 560 570 FLJ002 GITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATP ::::::: ::::: :::::::::::::::::::::::::::::::::::::::::::: gi|177 GITGPPGLPGPPG---APGAFDETGIAGLHLPNGGVEGAVLGKGGKPQFGLGELSAHATP 460 470 480 490 500 580 590 600 610 620 630 FLJ002 AFTAVLTSPFPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWV :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|177 AFTAVLTSPLPASGMPVKFDRTLYNGHSGYNPATGIFTCPVGGVYYFAYHVHVKGTNVWV 510 520 530 540 550 560 640 650 660 670 680 690 FLJ002 ALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQMPSDQANGLYSTEYIHSSF :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|177 ALYKNNVPATYTYDEYKKGYLDQASGGAVLQLRPNDQVWVQIPSDQANGLYSTEYIHSSF 570 580 590 600 610 620 700 FLJ002 SGFLLCPT :::::::: gi|177 SGFLLCPT 630 705 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 19:38:54 2009 done: Fri Feb 27 19:46:52 2009 Total Scan time: 1053.730 Total Display time: 0.290 Function used was FASTA [version 34.26.5 April 26, 2007]