# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj03670.fasta.huge -Q ../query/FLJ00200.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00200, 122 aa vs ./tmplib.10216 library 2210872 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.0312+/-0.0044; mu= 16.3461+/- 0.298 mean_var=107.0979+/-22.489, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.123932 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0705 ( 1483 res) hg03359s1 (1483) 105 28.9 0.9 KIAA0978 ( 1368 res) fg02182 (1368) 92 26.5 4.3 FLJ00296 ( 187 res) sh03944 ( 187) 81 23.1 6.2 KIAA0227 ( 336 res) ha02748 ( 336) 82 23.7 7.4 KIAA1567 ( 924 res) fh22119 ( 924) 85 25.0 8.4 FLJ00053 ( 443 res) as00053 ( 443) 82 23.9 8.5 FLJ00283 ( 500 res) sh02088 ( 500) 82 24.0 9 KIAA0552 ( 709 res) hh00869 ( 709) 83 24.4 9.5 KIAA0236 ( 1696 res) ha04654 (1696) 86 25.6 10 KIAA1038 ( 496 res) fh02273 ( 496) 81 23.8 10 FLJ00169 ( 432 res) sh07709 ( 432) 80 23.5 11 KIAA1781 ( 974 res) fg06971(revised) ( 974) 83 24.6 11 FLJ00201 ( 705 res) sj04110 ( 705) 80 23.9 14 FLJ00094 ( 376 res) as00094 ( 376) 77 22.9 15 KIAA0954 ( 1183 res) hj05543s1 (1183) 81 24.4 16 KIAA0357 ( 2992 res) hh00016y2 (2992) 84 25.6 17 KIAA0488 ( 523 res) af14633 ( 523) 76 22.9 19 FLJ00381 ( 343 res) sj01456 ( 343) 74 22.3 20 FLJ00008 ( 217 res) as00008 ( 217) 72 21.6 20 FLJ00099 ( 217 res) as00099 ( 217) 72 21.6 20 FLJ00358 ( 217 res) sh03894 ( 217) 72 21.6 20 KIAA1311 ( 889 res) fh11512 ( 889) 77 23.5 22 KIAA1685 ( 1505 res) pf04287 (1505) 79 24.2 23 KIAA1787 ( 1564 res) fh19054 (1564) 79 24.3 23 KIAA1995 ( 1011 res) bh00088 (1011) 77 23.6 24 FLJ00158 ( 308 res) sh06588 ( 308) 72 21.9 24 KIAA1400 ( 1093 res) hk08136 (1093) 77 23.7 25 KIAA0296 ( 1838 res) hf00260 (1838) 79 24.4 25 KIAA0271 ( 202 res) ha06752 ( 202) 70 21.2 25 KIAA0229 ( 1180 res) ha02570 (1180) 77 23.7 26 KIAA1576 ( 448 res) fj02237 ( 448) 73 22.3 26 KIAA1642 ( 1997 res) hh02864(revised) (1997) 79 24.5 26 FLJ00072 ( 204 res) as00072 ( 204) 69 21.0 29 KIAA2010 ( 920 res) fj14762 ( 920) 75 23.2 29 KIAA0473 ( 937 res) hh00220 ( 937) 75 23.2 29 KIAA0192 ( 2124 res) ha02370 (2124) 78 24.3 30 KIAA1184 ( 380 res) hg01696a ( 380) 71 21.8 30 KIAA0201 ( 949 res) ha03256 ( 949) 74 23.0 33 KIAA1639 ( 2584 res) af14886 (2584) 78 24.5 33 KIAA1214 ( 462 res) fh01431 ( 462) 71 22.0 34 KIAA1135 ( 789 res) hj05037 ( 789) 73 22.7 34 KIAA0855 ( 632 res) hk06219 ( 632) 72 22.4 35 KIAA0302 ( 2414 res) hf00409s2 (2414) 77 24.2 36 KIAA0857 ( 733 res) hk06227 ( 733) 72 22.5 37 KIAA0945 ( 797 res) hj04760 ( 797) 72 22.5 39 KIAA1494 ( 638 res) fj08673 ( 638) 71 22.2 39 KIAA1499 ( 660 res) hh04716 ( 660) 71 22.2 40 KIAA0508 ( 253 res) hh00207 ( 253) 67 20.8 41 KIAA0365 ( 1181 res) hh00120s1 (1181) 73 23.0 42 KIAA1878 ( 453 res) pj01649 ( 453) 69 21.6 43 >>KIAA0705 ( 1483 res) hg03359s1 (1483 aa) initn: 129 init1: 63 opt: 105 Z-score: 107.2 bits: 28.9 E(): 0.9 Smith-Waterman score: 106; 30.579% identity (52.066% similar) in 121 aa overlap (6-121:1350-1460) 10 20 30 FLJ002 CSEWGRRARRGVEVAAGASSGGETRQPGNGTRAGG : :: .: : :... :. .:.. .:: : KIAA07 HDVRKPKELSACGQKKQRLGEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPG 1320 1330 1340 1350 1360 1370 40 50 60 70 80 90 FLJ002 PEETAAQYAVIAI---VPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGEAQ . : :. : .: . : .: .:.: . . :::::::: . KIAA07 LAAADAADAARAGGKEAP----RAAAGSELC---RREG---PGAAPAFAGPGGGGSGALE 1380 1390 1400 1410 1420 100 110 120 FLJ002 LGSRWEGR-GHEPSPSSTWGLPA-ESCLASGV .: .: : .:.: : :: .. .: : KIAA07 AEGRAGARAGPRPGPRPPGGAPARKAAVAPGPWKVPGSDKLPSVLKPGASAASR 1430 1440 1450 1460 1470 1480 >>KIAA0978 ( 1368 res) fg02182 (1368 aa) initn: 152 init1: 62 opt: 92 Z-score: 95.0 bits: 26.5 E(): 4.3 Smith-Waterman score: 95; 37.500% identity (57.143% similar) in 56 aa overlap (69-117:455-499) 40 50 60 70 80 90 FLJ002 TAAQYAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEV-------GPGPGGGGSGEA .:.:: :.:. : ::::::.: . KIAA09 IPTTESSCRGWTGARTLADIKARALQVRGARGHHC--HREAATTAIGGGGGPGGGGGGAT 430 440 450 460 470 480 100 110 120 FLJ002 QLGSRWEGRGHEPSPSSTWGLPAESCLASGV . :. ::: :. : .:.: KIAA09 DEGG---GRG------SSSGDGGEACGHPEPRGGPSTPGKCTSDLQRTQLLPPYPLNGEH 490 500 510 520 530 >>FLJ00296 ( 187 res) sh03944 (187 aa) initn: 75 init1: 52 opt: 81 Z-score: 92.1 bits: 23.1 E(): 6.2 Smith-Waterman score: 81; 45.000% identity (67.500% similar) in 40 aa overlap (81-118:81-116) 60 70 80 90 100 FLJ002 VFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGE-AQLGSRWEGRGHEPSPS-S ::::.:: :..:: : :.: :.:: . FLJ002 DADTFAFCCASGRLGLVDTRQKWAPLENRSPGPGSGGERWCAEVGS-W-GQG--PGPSIA 60 70 80 90 100 110 120 FLJ002 TWGLPAESCLASGV . : .. :: FLJ002 SLGSDGRLCLLDPRDLCHPVSSVQCPVSVPSPDPELLRVTWAPGLKNCLAISGTAEQDFV 110 120 130 140 150 160 >>KIAA0227 ( 336 res) ha02748 (336 aa) initn: 139 init1: 68 opt: 82 Z-score: 90.8 bits: 23.7 E(): 7.4 Smith-Waterman score: 82; 28.125% identity (46.875% similar) in 96 aa overlap (10-101:19-111) 10 20 30 40 50 FLJ002 CSEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPEETAAQYAVIAIVPV : .:: : ::. : . . :: :: :. : KIAA02 SGPRSPRSASPGPASTGPRHPQVAEG---GGRERAARSREAGEGPASEAAAAAAGAASGS 10 20 30 40 50 60 70 80 90 100 FLJ002 FCLMGLLGILVCNLLKRKGYHCTAH----KEVGPGPGGGGSGEAQLGSRWEGRGHEPSPS : : . . . : :. . ..:: :::.: .:...: . :: KIAA02 SGENGSAGRQTAAGCHGRHEACEARGRRPRLLNPGRRGGGGGGGQIAARTRRRGGGRMER 60 70 80 90 100 110 110 120 FLJ002 STWGLPAESCLASGV KIAA02 KGSAAGAKGNPSPPAAGEGQRPPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQ 120 130 140 150 160 170 >>KIAA1567 ( 924 res) fh22119 (924 aa) initn: 111 init1: 53 opt: 85 Z-score: 89.7 bits: 25.0 E(): 8.4 Smith-Waterman score: 85; 34.483% identity (58.621% similar) in 58 aa overlap (64-120:30-86) 40 50 60 70 80 90 FLJ002 GGPEETAAQYAVIAIVPVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGS-GEAQ :. . : : .: .::: ::.:. ::: KIAA15 SRSRVPVPGPGAAAAPCPAPASPRRHPSANIPEIKRYAAAAAAAAGPGAGGAGDRGEAA 10 20 30 40 50 100 110 120 FLJ002 LGSRWEGRGHEPSPSSTWGLPAESCLASGV .. :. : : :.: . : . :.. KIAA15 PAAAMEALGPGP-PASLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDVDIKPEK 60 70 80 90 100 110 >>FLJ00053 ( 443 res) as00053 (443 aa) initn: 80 init1: 80 opt: 82 Z-score: 89.7 bits: 23.9 E(): 8.5 Smith-Waterman score: 82; 39.535% identity (58.140% similar) in 43 aa overlap (70-111:54-93) 40 50 60 70 80 90 FLJ002 AAQYAVIAIVPVFCLMGLLGILVCNLLKRKGYHCT-AHKEVGPGPGGGGSGEAQLGSRWE :.. . :: : : : .:.: .::: FLJ000 RELLCSEQGGPADALRSAALPPVPHRSFGWGFRSSPAHTPCGWGAWGRCNGRAWGQDRWE 30 40 50 60 70 80 100 110 120 FLJ002 GRGHEPSPSSTWGLPAESCLASGV ::: :.:. : FLJ000 GRGW---PASVPGGLTIGVEVTSGPAAHRAQGYHEGPALSSGVSECLGESRPGEDGGTGP 90 100 110 120 130 140 >>FLJ00283 ( 500 res) sh02088 (500 aa) initn: 111 init1: 80 opt: 82 Z-score: 89.2 bits: 24.0 E(): 9 Smith-Waterman score: 82; 39.535% identity (58.140% similar) in 43 aa overlap (70-111:54-93) 40 50 60 70 80 90 FLJ002 AAQYAVIAIVPVFCLMGLLGILVCNLLKRKGYHCT-AHKEVGPGPGGGGSGEAQLGSRWE :.. . :: : : : .:.: .::: FLJ002 RELLCLEQGGPADALRSAALPPVPHRSFGWGFRSSPAHTPCGWGAWGRCNGRAWGQDRWE 30 40 50 60 70 80 100 110 120 FLJ002 GRGHEPSPSSTWGLPAESCLASGV ::: :.:. : FLJ002 GRGW---PASVPGGLTLGVEVTSGPAAHRAQGYHEGPALSSGVSECLGESRPGEDGGTGP 90 100 110 120 130 140 >>KIAA0552 ( 709 res) hh00869 (709 aa) initn: 150 init1: 69 opt: 83 Z-score: 88.8 bits: 24.4 E(): 9.5 Smith-Waterman score: 83; 43.902% identity (63.415% similar) in 41 aa overlap (82-121:298-336) 60 70 80 90 100 110 FLJ002 FCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGEAQLGSRWEGRGHEPS-PSSTW : .::::: .::. ::. : ::. KIAA05 SSYSQHLAPLSASTSHINRIGTASYGSGSGGSSGGGSGYQDLGTSDSGRASSKSGSSSSM 270 280 290 300 310 320 120 FLJ002 GLPAESCLASGV : :.. :.:: KIAA05 GRPGH--LGSGEGGGGGLPFAACSPPSPSALIQELEERLWEKEQEVAALRRSLEQSEAAV 330 340 350 360 370 380 >>KIAA0236 ( 1696 res) ha04654 (1696 aa) initn: 77 init1: 77 opt: 86 Z-score: 88.3 bits: 25.6 E(): 10 Smith-Waterman score: 86; 41.463% identity (53.659% similar) in 41 aa overlap (80-116:629-669) 50 60 70 80 90 100 FLJ002 PVFCLMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGEAQLGSRWEGRGHEPS---- :: : . ::..: :: ::::. KIAA02 FHKRKAHGYVPGDQAWQLRYASQEPEGAMQGPTPPPDSEPSNQLSARPEGPGHEPGTVVD 600 610 620 630 640 650 110 120 FLJ002 PSSTWGLPAESCLASGV :: .:: : KIAA02 PSLDQALPEMSEEVNTGRQEGSEAPHGGDLGGSPSPAEVEEGSCTLHLEALGVELESVTE 660 670 680 690 700 710 >>KIAA1038 ( 496 res) fh02273 (496 aa) initn: 73 init1: 49 opt: 81 Z-score: 88.3 bits: 23.8 E(): 10 Smith-Waterman score: 81; 32.955% identity (53.409% similar) in 88 aa overlap (8-90:183-262) 10 20 30 FLJ002 CSEWGRRARRGVEVAAGASSGGETRQPGNGTRAGGPE : :: : :: .::.::. : .:. : KIAA10 TLMDAPGHKDFIPNMITGAAQADVAVLVVDASRG-EFEAGFETGGQTREHGLLVRSLGVT 160 170 180 190 200 210 40 50 60 70 80 90 FLJ002 ETAAQYAVIAIV----PVFC-LMGLLGILVCNLLKRKGYHCTAHKEVGPGPGGGGSGEAQ . :. . : : . : :: ..::. :.. ...:: : .: ::: KIAA10 QLAVAVNKMDQVNWQQERFQEITGKLG----HFLKQAGFK---ESDVGFIPTSGLSGENL 220 230 240 250 260 100 110 120 FLJ002 LGSRWEGRGHEPSPSSTWGLPAESCLASGV KIAA10 ITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAG 270 280 290 300 310 320 122 residues in 1 query sequences 2210872 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:31 2009 done: Fri Feb 27 10:44:31 2009 Total Scan time: 0.310 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]