# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj02368.fasta.nr -Q ../query/FLJ00190.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00190, 521 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824904 sequences Expectation_n fit: rho(ln(x))= 5.5563+/-0.000188; mu= 10.7651+/- 0.011 mean_var=87.6123+/-16.750, 0's: 36 Z-trim: 40 B-trim: 0 in 0/64 Lambda= 0.137022 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|47077653|dbj|BAD18707.1| FLJ00190 protein [Homo ( 521) 3636 728.7 9.6e-208 gi|55976528|sp|Q8IU57.1|I28RA_HUMAN RecName: Full= ( 520) 3631 727.7 1.9e-207 gi|108999239|ref|XP_001105189.1| PREDICTED: simila ( 526) 3140 630.6 3.2e-178 gi|119615519|gb|EAW95113.1| interleukin 28 recepto ( 437) 3043 611.4 1.6e-172 gi|119888805|ref|XP_874034.2| PREDICTED: similar t ( 524) 2352 474.8 2.5e-131 gi|73950610|ref|XP_855110.1| PREDICTED: similar to ( 540) 2308 466.1 1e-128 gi|144853663|gb|AAI39723.1| IL28RA protein [Homo s ( 322) 2235 451.5 1.6e-124 gi|75516482|gb|AAI01976.1| IL28RA protein [Homo sa ( 322) 2225 449.6 6.1e-124 gi|55976520|sp|Q8CGK5.1|I28RA_MOUSE RecName: Full= ( 535) 1968 398.9 1.8e-108 gi|109475659|ref|XP_342947.2| PREDICTED: similar t ( 530) 1965 398.3 2.7e-108 gi|37046715|gb|AAH57856.1| Interleukin 28 receptor ( 535) 1962 397.7 4e-108 gi|25527129|gb|AAN28267.1| interleukin 28 receptor ( 491) 1872 379.9 8.6e-103 gi|114554681|ref|XP_513203.2| PREDICTED: interleuk ( 492) 1858 377.2 5.8e-102 gi|73487338|gb|AAI01409.1| IL28RA protein [Homo sa ( 283) 1804 366.3 6.3e-99 gi|26986040|emb|CAD58830.1| soluble isoform of Lik ( 244) 1555 317.0 3.7e-84 gi|108999242|ref|XP_001105109.1| PREDICTED: simila ( 497) 1533 312.9 1.3e-82 gi|194207897|ref|XP_001917953.1| PREDICTED: simila ( 489) 1358 278.3 3.3e-72 gi|119615522|gb|EAW95116.1| interleukin 28 recepto ( 184) 1258 258.2 1.4e-66 gi|55665893|emb|CAH70117.1| interleukin 28 recepto ( 185) 1258 258.2 1.4e-66 gi|25527136|gb|AAN28268.1| interleukin 28 receptor ( 211) 1190 244.8 1.7e-62 gi|148698024|gb|EDL29971.1| interleukin 28 recepto ( 254) 1049 217.0 4.9e-54 gi|149024266|gb|EDL80763.1| similar to class II cy ( 230) 1001 207.5 3.3e-51 gi|126328589|ref|XP_001365104.1| PREDICTED: simila ( 266) 814 170.6 4.9e-40 gi|149634890|ref|XP_001509052.1| PREDICTED: simila (1058) 586 126.0 5.2e-26 gi|149024267|gb|EDL80764.1| similar to class II cy ( 204) 533 114.9 2.1e-23 gi|50759912|ref|XP_417841.1| PREDICTED: similar to ( 246) 468 102.1 1.8e-19 gi|209734216|gb|ACI67977.1| Interleukin-20 recepto ( 269) 245 58.1 3.6e-06 gi|109072731|ref|XP_001099782.1| PREDICTED: simila ( 286) 237 56.5 1.1e-05 gi|114609477|ref|XP_527512.2| PREDICTED: interleuk ( 231) 231 55.3 2.2e-05 gi|15212826|gb|AAK85714.1| interleukin 22-binding ( 231) 227 54.5 3.8e-05 gi|194669943|ref|XP_612334.4| PREDICTED: similar t ( 230) 220 53.1 9.8e-05 gi|73946038|ref|XP_854233.1| PREDICTED: similar to ( 231) 213 51.7 0.00026 gi|74001402|ref|XP_535581.2| PREDICTED: similar to ( 374) 215 52.3 0.00028 gi|92098250|gb|AAI15201.1| Cytokine receptor famil ( 578) 217 52.8 0.0003 gi|68534769|gb|AAH98871.1| Crfb12 protein [Danio r ( 579) 217 52.8 0.0003 gi|149059840|gb|EDM10723.1| interferon (alpha and ( 439) 215 52.3 0.00032 gi|74193109|dbj|BAE20584.1| unnamed protein produc ( 230) 210 51.1 0.00038 gi|149059838|gb|EDM10721.1| interferon (alpha and ( 593) 215 52.4 0.0004 gi|218456203|gb|ACK77495.1| interleukin-10 recepto ( 323) 210 51.2 0.0005 gi|74223983|dbj|BAE23866.1| unnamed protein produc ( 230) 206 50.3 0.00067 gi|115528962|gb|AAI24999.1| Interleukin 22 recepto ( 230) 206 50.3 0.00067 gi|33386571|emb|CAD88474.1| putative cytokine rece ( 230) 206 50.3 0.00067 gi|148671504|gb|EDL03451.1| interleukin 22 recepto ( 234) 206 50.3 0.00067 gi|114683920|ref|XP_531433.2| PREDICTED: interleuk ( 325) 207 50.6 0.00075 gi|61213139|sp|Q7TNI4.1|I22R2_RAT RecName: Full=In ( 229) 205 50.1 0.00076 gi|61213699|sp|Q80XF5.1|I22R2_MOUSE RecName: Full= ( 230) 205 50.1 0.00076 gi|149059833|gb|EDM10716.1| similar to class II cy ( 351) 206 50.5 0.00092 gi|117558495|gb|AAI26873.1| Interleukin 22 recepto ( 232) 203 49.7 0.001 gi|118088508|ref|XP_001233762.1| PREDICTED: simila ( 244) 203 49.8 0.001 gi|114683922|ref|XP_001165068.1| PREDICTED: hypoth ( 327) 204 50.1 0.0011 >>gi|47077653|dbj|BAD18707.1| FLJ00190 protein [Homo sap (521 aa) initn: 3636 init1: 3636 opt: 3636 Z-score: 3885.9 bits: 728.7 E(): 9.6e-208 Smith-Waterman score: 3636; 100.000% identity (100.000% similar) in 521 aa overlap (1-521:1-521) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY 70 80 90 100 110 120 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG 130 140 150 160 170 180 190 200 210 220 230 240 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL 190 200 210 220 230 240 250 260 270 280 290 300 FLJ001 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT 250 260 270 280 290 300 310 320 330 340 350 360 FLJ001 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH 310 320 330 340 350 360 370 380 390 400 410 420 FLJ001 SEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGPGGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 SEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGPGGD 370 380 390 400 410 420 430 440 450 460 470 480 FLJ001 GHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCWESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|470 GHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCWESS 430 440 450 460 470 480 490 500 510 520 FLJ001 PEEEEEARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR ::::::::::::::::::::::::::::::::::::::::: gi|470 PEEEEEARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR 490 500 510 520 >>gi|55976528|sp|Q8IU57.1|I28RA_HUMAN RecName: Full=Inte (520 aa) initn: 3631 init1: 3631 opt: 3631 Z-score: 3880.6 bits: 727.7 E(): 1.9e-207 Smith-Waterman score: 3631; 100.000% identity (100.000% similar) in 520 aa overlap (2-521:1-520) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY 60 70 80 90 100 110 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG 120 130 140 150 160 170 190 200 210 220 230 240 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL 180 190 200 210 220 230 250 260 270 280 290 300 FLJ001 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT 240 250 260 270 280 290 310 320 330 340 350 360 FLJ001 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH 300 310 320 330 340 350 370 380 390 400 410 420 FLJ001 SEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGPGGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 SEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGPGGD 360 370 380 390 400 410 430 440 450 460 470 480 FLJ001 GHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCWESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|559 GHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCWESS 420 430 440 450 460 470 490 500 510 520 FLJ001 PEEEEEARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR ::::::::::::::::::::::::::::::::::::::::: gi|559 PEEEEEARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR 480 490 500 510 520 >>gi|108999239|ref|XP_001105189.1| PREDICTED: similar to (526 aa) initn: 3008 init1: 1937 opt: 3140 Z-score: 3356.0 bits: 630.6 E(): 3.2e-178 Smith-Waterman score: 3140; 86.502% identity (93.726% similar) in 526 aa overlap (2-521:1-526) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY ::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|108 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSRNFSVYLTWLPGLGNPQDVTYFVAY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY ::::: ::::.::::::::::::::::::::::::::::::.:::::::::::::::.:: gi|108 QSSPTPRRWRKVEECAGTKELLCSMMCLKKQDLYNKFKGRVQTVSPSSKSPWVESEYVDY 60 70 80 90 100 110 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG ::: :. : ::...: .: . . : : .::: . .:. ::::.. .::::::::: gi|108 LFEDSPSHPGAVLSEVEVAVSQDQATVLQPGFPPLLIDWETPRWKEGGSLETLFPVTPHG 120 130 140 150 160 170 190 200 210 220 230 240 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL :::.:::::::::.:::::::::::::::::.::::: :.::::::.::::::::::::: gi|108 QPVRITLQPAASERHCLSARTIYTFSVPKYSEFSKPTWFVLEVPEASWAFLVLPSLLILL 180 190 200 210 220 230 250 260 270 280 290 300 FLJ001 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT :::::::::::.::::::::::::::::::::::.::::::::::::.:::.:::::::: gi|108 LVIAAGGVIWKSLMGNPWFQRAKMPRALDFSGHTYPVATFQPSRPESLNDLLLCPQKELT 240 250 260 270 280 290 310 320 330 340 350 FLJ001 RGVRPTPRVRAPATQQTRWKKDLAEDE---EEEDEEDTEDGVSFQPYIEPPSFLGQEHQA :::: :::::::::::. ::::::::: :::.:::::::::::::::::::::::::. gi|108 RGVRLTPRVRAPATQQAGWKKDLAEDEDEEEEEEEEDTEDGVSFQPYIEPPSFLGQEHQV 300 310 320 330 340 350 360 370 380 390 400 410 FLJ001 PGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGP :::::.::::::::::::.:.::::::::::::::::::::::::::::::::::::::: gi|108 PGHSEVGGVDSGRPRAPLLPGEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPGQGP 360 370 380 390 400 410 420 430 440 450 460 470 FLJ001 GGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCW ::::::: ::::::: :::::::::.:.::::::::::::: :::::::::::.:::::: gi|108 GGDGHQEPLPPPEFSTDSGFLEELPKDDLSSWATWGTLPPESNLVPGGPPVSLRTLTFCW 420 430 440 450 460 470 480 490 500 510 520 FLJ001 ESSPEEEEE---ARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR ::::::::: ::::: :::::::::::::::::.:::: :.:::: gi|108 ESSPEEEEEEEEARESETEDSDAGSWGAESTQRTEERGRTRGYYMAR 480 490 500 510 520 >>gi|119615519|gb|EAW95113.1| interleukin 28 receptor, a (437 aa) initn: 3043 init1: 3043 opt: 3043 Z-score: 3253.4 bits: 611.4 E(): 1.6e-172 Smith-Waterman score: 3043; 100.000% identity (100.000% similar) in 437 aa overlap (85-521:1-437) 60 70 80 90 100 110 FLJ001 TYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVE :::::::::::::::::::::::::::::: gi|119 MMCLKKQDLYNKFKGRVRTVSPSSKSPWVE 10 20 30 120 130 140 150 160 170 FLJ001 SEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLF 40 50 60 70 80 90 180 190 200 210 220 230 FLJ001 PVTPHGQPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PVTPHGQPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLP 100 110 120 130 140 150 240 250 260 270 280 290 FLJ001 SLLILLLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SLLILLLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLC 160 170 180 190 200 210 300 310 320 330 340 350 FLJ001 PQKELTRGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PQKELTRGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQE 220 230 240 250 260 270 360 370 380 390 400 410 FLJ001 HQAPGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HQAPGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSWDRAGSSGYLAEKGPG 280 290 300 310 320 330 420 430 440 450 460 470 FLJ001 QGPGGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QGPGGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLT 340 350 360 370 380 390 480 490 500 510 520 FLJ001 FCWESSPEEEEEARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FCWESSPEEEEEARESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR 400 410 420 430 >>gi|119888805|ref|XP_874034.2| PREDICTED: similar to in (524 aa) initn: 1783 init1: 1244 opt: 2352 Z-score: 2514.1 bits: 474.8 E(): 2.5e-131 Smith-Waterman score: 2352; 67.041% identity (81.835% similar) in 534 aa overlap (2-521:1-524) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY :.: .::.::::::::.::::: :::::::::::..:::::::::: ::::.::::::: gi|119 MTGARRWAPLLLCLLQSAPGRPLLAPPQNVTLLSRDFSVYLTWLPGPGNPQNVTYFVAY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY :: ::::.:..:::::::.::.:::.:::: :::::::..::::..::::::...:: gi|119 QSFAPPRRWRRVKKCAGTKELVCSLMCLEKQDLCNKFKGRVQAVSPSARSPWVESKFMDY 60 70 80 90 100 110 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG .:::::::::::..:::::: .::::::: :.: :..::: :::::. ::: :: : :: gi|119 FFEVEPAPPVLVFNQTEEILIVNATYQLPHCLPQPDMNYEVNFWKEGTKNKTRFPDTRHG 120 130 140 150 160 170 190 200 210 220 230 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVL-PSLLIL ::::: ::: .: :::::::::: :. ::::.::.::::.::.: .:::.:.: : :: : gi|119 QPVQIPLQPDTSGHHCLSARTIYFFGNPKYSEFSEPTCFFLEAPGSNWALLLLLPFLLPL 180 190 200 210 220 230 240 250 260 270 280 290 FLJ001 LLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKEL ::..: : :.:::. :::::..:::.::.:::: :::::. :: ..::..:::::. gi|119 LLAVAIGPVMWKTFRENPWFQQTKMPQALSFSGHRLCGATFQPGGPECLHDLIVCPQKEV 240 250 260 270 280 290 300 310 320 330 340 350 FLJ001 TRGVRPTPRVRAPATQQTRWKKDLAED---EEEEDEEDTEDGVSFQPYIEPPSFLGQEHQ :: :: : :::::: :.: .:: .:. :: :::: . :::::::.::: ::::: : gi|119 TRRVRLTSRVRAPAPVQARPEKDSTEEKDGEESTDEEDLDPGVSFQPYVEPPPFLGQEPQ 300 310 320 330 340 350 360 370 380 390 400 410 FLJ001 APGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSS--WDRAGSSGYLAEKGPG .:: ..:: .: .::: .::::: .:: :::.::. :: ::.::::::::.:::: gi|119 SPGPTKAG-----EPWTPLVQGEGSSACSSSGRSWVSTAGSSSPWDEAGSSGYLAKKGPG 360 370 380 390 400 410 420 430 440 450 460 470 FLJ001 QGPGGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLT :: : . ::. :::: :::. : : .::::::..:: : ::::: :::::.::: gi|119 QGMGREEHQKPLPPP---KDSSSLGEPSKDNLSSWTSWGLSSPGLNLVPGEPPVSLRTLT 420 430 440 450 460 470 480 490 500 510 520 FLJ001 FCWESSPE-------EEEEA-RESEIEDSDAGSWGAESTQRTEDRGRTLGHYMAR :::.:::: ::::. :::: ::: ::::::.: :::: : ::::.:: gi|119 FCWDSSPEDDEGEEEEEEEGWRESESEDSGAGSWGAKSLQRTEV--RPLGHYLAR 480 490 500 510 520 >>gi|73950610|ref|XP_855110.1| PREDICTED: similar to int (540 aa) initn: 1742 init1: 1270 opt: 2308 Z-score: 2466.9 bits: 466.1 E(): 1e-128 Smith-Waterman score: 2308; 68.605% identity (82.171% similar) in 516 aa overlap (18-521:31-540) 10 20 30 40 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPG : :.: :::::::::::.::::::::::: gi|739 MAKCHLQKARPSWRNFKHRRDVCQRVNRSLARGGKPCLAPPQNVTLLSRNFSVYLTWLPG 10 20 30 40 50 60 50 60 70 80 90 100 FLJ001 LGNPQDVTYFVAYQSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPS : :.:::::::::.:: ::::.:..::::::: ::.:::.:::::::::::: .:::: gi|739 PGYSQNVTYFVAYQSAPTPRRWRKVKKCAGTKELACSLMCLEKQDLYNKFKGRVWAVSPS 70 80 90 100 110 120 110 120 130 140 150 160 FLJ001 SKSPWVESEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEG ..:: :::.:::::::::::::.::.:.:::::: ::::::: :::: :::::: ::::: gi|739 ARSPSVESKYLDYLFEVEPAPPTLVVTRTEEILSINATYQLPHCMPPPDLKYEVDFWKEG 130 140 150 160 170 180 170 180 190 200 210 220 FLJ001 AGNKTLFPVTPHGQPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEAN ::: ::.::.:::::: :::: : :.:: :::::::. ::::.:::::::.: .: .. gi|739 IKNKTQFPATPRGQPVQIPLQPAISGHYCLRARTIYTFGDPKYSEFSKPTCFFLGAPGTS 190 200 210 220 230 240 230 240 250 260 270 280 FLJ001 WAFL-VLPSLLILLLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPE :::: .:: :: :::::: : :.::.: .:::::::::: ::::::. ::::::::: :: gi|739 WAFLGLLPLLLPLLLVIAIGHVFWKSLTANPWFQRAKMPLALDFSGYRHPVATFQPSGPE 250 260 270 280 290 300 290 300 310 320 330 340 FLJ001 SVNDLFLCPQKELTRGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIE .. : ::::::::: : :.: ::.:. :. ..:. .: ::.::::::.: ::::::.: gi|739 YLDILVLCPQKELTRRVWPSPGVRTPVIFQAGYEKNSTE-EEKEDEEDTDDCVSFQPYLE 310 320 330 340 350 350 360 370 380 390 400 FLJ001 PPSFLGQEHQAPGHSEAGGVDSGRPRAPLVPSEGSSAWDSSDRSWASTV-DSSWDRAGSS :: ::::::: : :::::.. : :: : : ::: :.:::::::: .::::. ::: gi|739 PPPFLGQEHQIPRHSEAGSTWS----AP-VQVEDSSATDASDRSWASTGGSSSWDEPGSS 360 370 380 390 400 410 410 420 430 440 450 460 FLJ001 GYLAEKGPGQGPGGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGG :::.: :::::.::: :: : :::.: .:::. .:.:: ::.:: : :.::: gi|739 CYLAKKTPGQGPSGDGCQEPLSLLEFSNDMSFLEDPLKDDLSFWANWGFSSPGLNIVPGE 420 430 440 450 460 470 470 480 490 500 510 FLJ001 PPVSLQTLTFCWESSPEEEEEARE----------SEIEDSDAGSWGAESTQRTEDRGRTL :::::.::::::.: :::::: .: :..::...:.:::.: :..: ::.:: gi|739 PPVSLHTLTFCWDSCPEEEEEEEEEEEIEGGREQSKVEDDSTGNWGARSLQKSEVRGETL 480 490 500 510 520 530 520 FLJ001 GHYMAR :::::: gi|739 GHYMAR 540 >>gi|144853663|gb|AAI39723.1| IL28RA protein [Homo sapie (322 aa) initn: 2235 init1: 2235 opt: 2235 Z-score: 2392.0 bits: 451.5 E(): 1.6e-124 Smith-Waterman score: 2235; 100.000% identity (100.000% similar) in 322 aa overlap (2-323:1-322) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY 60 70 80 90 100 110 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG 120 130 140 150 160 170 190 200 210 220 230 240 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL 180 190 200 210 220 230 250 260 270 280 290 300 FLJ001 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|144 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT 240 250 260 270 280 290 310 320 330 340 350 360 FLJ001 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH ::::::::::::::::::::::: gi|144 RGVRPTPRVRAPATQQTRWKKDL 300 310 320 >>gi|75516482|gb|AAI01976.1| IL28RA protein [Homo sapien (322 aa) initn: 2225 init1: 2225 opt: 2225 Z-score: 2381.3 bits: 449.6 E(): 6.1e-124 Smith-Waterman score: 2225; 99.689% identity (99.689% similar) in 322 aa overlap (2-323:1-322) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY ::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|755 MAGPEGWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|755 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY 60 70 80 90 100 110 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|755 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG 120 130 140 150 160 170 190 200 210 220 230 240 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|755 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL 180 190 200 210 220 230 250 260 270 280 290 300 FLJ001 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|755 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT 240 250 260 270 280 290 310 320 330 340 350 360 FLJ001 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH ::::::::::::::::::::::: gi|755 RGVRPTPRVRAPATQQTRWKKDL 300 310 320 >>gi|55976520|sp|Q8CGK5.1|I28RA_MOUSE RecName: Full=Inte (535 aa) initn: 1886 init1: 1152 opt: 1968 Z-score: 2103.7 bits: 398.9 E(): 1.8e-108 Smith-Waterman score: 2047; 59.662% identity (78.612% similar) in 533 aa overlap (6-521:5-535) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY .::.:::: :::.: ::::::::.::::.::::.::::::::::.: .:::::.: gi|559 MWRADRWAPLLLFLLQSALGRPRLAPPRNVTLFSQNFTVYLTWLPGLGSPPNVTYFVTY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY :: . :: ::.::: : :.: .::::: .::.::::::...: ..:: :::.::.: gi|559 QSY-IKTGWRPVEHCAGIKALVCPLMCLKKLNLYSKFKGRVQAASAHGRSPRVESRYLEY 60 70 80 90 100 110 130 140 150 160 170 180 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYEVAFWKEGAGNKTLFPVTPHG ::.:: :::.::::: :.:: .::::::::::: :.:::.: ::::: :.::::: ::.: gi|559 LFDVELAPPTLVLTQMEKILRVNATYQLPPCMPSLELKYQVEFWKEGLGSKTLFPDTPYG 120 130 140 150 160 170 190 200 210 220 230 240 FLJ001 QPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLILL ::::: :: .::..:::::::.::. :::.::.:.:..::.: . : :..::::.:: gi|559 QPVQIPLQQGASRRHCLSARTVYTLIDIKYSQFSEPSCIFLEAPGDKRAVLAMPSLLLLL 180 190 200 210 220 230 250 260 270 280 290 300 FLJ001 LVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKELT .. .:.:: :: . :::::: .: ::::::: . .:::::::: :: .::.:::::::: gi|559 IAAVAAGVAWKIMKGNPWFQGVKTPRALDFSEYRYPVATFQPSGPEFSDDLILCPQKELT 240 250 260 270 280 290 310 320 330 340 350 360 FLJ001 RGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGH ::.:.:: ::: :. ..: .:::.:. . : .:: : :::.: : :.... .. : gi|559 IRNRPAPQVRNPATLQAGPERDSTEDEDEDTDYD-DDGDSVQPYLERPLFISEKPRVMEH 300 310 320 330 340 350 370 380 390 400 410 FLJ001 SEA--GGVDSGRPRAPLVPSEGSSAWDSSDRSWASTVDSSW-DRAGSSGYLAEKGPGQGP ::. .::::: : . : :.::::::::::::.:: :::. :..:::. : .: : :.: gi|559 SETDESGVDSGGPWTSPVGSDGSSAWDSSDRSWSSTGDSSYKDEVGSSSCLDRKEPDQAP 360 370 380 390 400 410 420 430 440 450 460 470 FLJ001 GGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQTLTFCW :: ::.:: :::.: : .:: .:.::.: :.: . .:.: :::::::::::: gi|559 CGDWLQEALPCLEFSEDLGTVEEPLKDGLSGWRISGSLSSKRDLAPVEPPVSLQTLTFCW 420 430 440 450 460 470 480 490 500 510 520 FLJ001 ESSPE-------EEEEARESEIED-------SDAGSWGAESTQRTEDRGRTLGHYMAR ..:: :::: .: : :: :.:: ::. :.:::: ::: :: :..: gi|559 VNNPEGEEEQEDEEEEEEEEEEEDWESEPKGSNAGCWGTSSVQRTEVRGRMLGDYLVR 480 490 500 510 520 530 >>gi|109475659|ref|XP_342947.2| PREDICTED: similar to In (530 aa) initn: 1694 init1: 725 opt: 1965 Z-score: 2100.6 bits: 398.3 E(): 2.7e-108 Smith-Waterman score: 2025; 59.404% identity (76.909% similar) in 537 aa overlap (7-521:6-530) 10 20 30 40 50 60 FLJ001 AMAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGLGNPQDVTYFVAY ::.:::: :.:.: ::::::::.:::::::::.::::::::::.: .:::::.: gi|109 MWRAGRWAPLLLFLMQSALGRPRLAPPRNVTLLSQNFTVYLTWLPGLGSPPNVTYFVTY 10 20 30 40 50 70 80 90 100 110 120 FLJ001 QSSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNKFKGRVRTVSPSSKSPWVESEYLDY .: .. ::.::.::: . :.: :::::::::: ::::::...: :::::::.::.: gi|109 KSYNNH--WRRVEHCAGISTLVCPMMCLKKQDLYIKFKGRVQAASAHVKSPWVESRYLEY 60 70 80 90 100 110 130 140 150 160 170 FLJ001 LFEVEPAPPVLVLTQTEEILSANATYQLPPCMP-PLDLKYEVAFWKEGAGNKTLFPVTPH .:.:: :::.:::.: :.::..::::::::::: :.:::.: :::: .::::: ::. gi|109 IFDVELAPPTLVLSQKEKILNVNATYQLPPCMPRSLELKYQVEFWKEDLRSKTLFPDTPY 120 130 140 150 160 170 180 190 200 210 220 230 FLJ001 GQPVQITLQPAASEHHCLSARTIYTFSVPKYSKFSKPTCFLLEVPEANWAFLVLPSLLIL ::::.: :: : .::.::::.::.. ::: ::.:.:..: .: :: : :..: ::.: gi|109 GQPVKIPLQQDARGRHCFSARTVYTLTHTKYSLFSEPSCIFLAAPGANRAVLAVPLLLLL 180 190 200 210 220 230 240 250 260 270 280 290 FLJ001 LLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPVATFQPSRPESVNDLFLCPQKEL :.. ::.:. :: . :::::: .:::.::::: . ::::::::: :: .::.::::::: gi|109 LIAAAAAGTAWKKMDGNPWFQWVKMPQALDFSENRHPVATFQPSGPEFSGDLILCPQKEL 240 250 260 270 280 290 300 310 320 330 340 350 FLJ001 TRGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPG : .::.::::.::: :. .:: .::: ::. .:: :.:::.: : :. .. :. gi|109 TIRTRPVPRVRGPATLQAGSEKDSTEDE---DEDTDDDGDSIQPYLERPLFVREKLQVTE 300 310 320 330 340 350 360 370 380 390 400 410 FLJ001 HSEA--GGVDSGRPRAPLVPSEGSSAWDSSDRSWASTV----DSSW-DRAGSSGYLAEKG :::: .:::: : :::::::::: ::.:: :::. :.::::. : .: gi|109 HSEADESGVDS-------VGSEGSSAWDSSGGSWSSTGVSSGDSSYKDEAGSSSCLDQKK 360 370 380 390 400 420 430 440 450 460 470 FLJ001 PGQGPGGDGHQESLPPPEFSKDSGFLEELPEDNLSSWATWGTLPPEPNLVPGGPPVSLQT : : : ::::: :: :::.: : .::: .:.::.: :::: :. .:.: ::::::: gi|109 PDQEPHGDGHQGPLPCLEFSEDLGTVEELLKDDLSGWRIWGTLSPKRDLAPVEPPVSLQT 410 420 430 440 450 460 480 490 500 510 FLJ001 LTFCWESSPEEEEEARE--------------SEIEDSDAGSWGAESTQRTEDRGRTLGHY :::::.:.:::::: .: :...::... : : : :::. :: :: : gi|109 LTFCWDSNPEEEEEEEEEEEEEEEEEEEDWESDLKDSNTSCWDASSPQRTDVRGGMLGDY 470 480 490 500 510 520 520 FLJ001 MAR :.: gi|109 MVR 530 521 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 18:18:48 2009 done: Fri Feb 27 18:25:52 2009 Total Scan time: 947.740 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]