# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj00125.fasta.nr -Q ../query/FLJ00172.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00172, 1125 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7827070 sequences
Expectation_n fit: rho(ln(x))= 5.5862+/-0.000185; mu= 12.4546+/- 0.010
mean_var=80.7167+/-15.814, 0's: 35 Z-trim: 38 B-trim: 10 in 1/66
Lambda= 0.142755
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 39, opt: 27, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|18676550|dbj|BAB84927.1| FLJ00172 protein [Homo (1125) 7257 1505.1 0
gi|119584555|gb|EAW64151.1| nucleoporin 210kDa, is (1886) 7257 1505.2 0
gi|119584556|gb|EAW64152.1| nucleoporin 210kDa, is (1887) 7257 1505.2 0
gi|116242720|sp|Q8TEM1.3|PO210_HUMAN RecName: Full (1887) 7249 1503.6 0
gi|168273116|dbj|BAG10397.1| nucleoporin 210kDa [s (1887) 7238 1501.3 0
gi|109034270|ref|XP_001083137.1| PREDICTED: simila (1887) 7137 1480.5 0
gi|30931086|gb|AAH52468.1| Nup210 protein [Mus mus (1842) 6196 1286.7 0
gi|97180293|sp|Q9QY81.2|PO210_MOUSE RecName: Full= (1886) 6196 1286.7 0
gi|148666876|gb|EDK99292.1| nucleoporin 210 [Mus m (1883) 6191 1285.7 0
gi|6650678|gb|AAF21969.1|AF113751_1 nuclear pore m (1886) 6139 1274.9 0
gi|121534|sp|P11654.1|PO210_RAT RecName: Full=Nucl (1886) 6106 1268.2 0
gi|126336534|ref|XP_001378689.1| PREDICTED: simila (1903) 5664 1177.1 0
gi|118096826|ref|XP_414320.2| PREDICTED: similar t (1883) 5239 1089.6 0
gi|73984954|ref|XP_541746.2| PREDICTED: similar to (3034) 4473 932.0 0
gi|194221037|ref|XP_001914906.1| PREDICTED: simila (1839) 4241 884.0 0
gi|47223214|emb|CAG11349.1| unnamed protein produc (1950) 3444 719.9 3.3e-204
gi|189540327|ref|XP_699573.3| PREDICTED: im:714133 ( 917) 3047 637.9 7.4e-180
gi|126307744|ref|XP_001372825.1| PREDICTED: simila (1901) 3015 631.6 1.3e-177
gi|149751306|ref|XP_001495971.1| PREDICTED: nucleo (1887) 2962 620.6 2.5e-174
gi|73961648|ref|XP_547570.2| PREDICTED: similar to (1888) 2960 620.2 3.3e-174
gi|109467041|ref|XP_001074975.1| PREDICTED: simila (1880) 2948 617.8 1.8e-173
gi|62643808|ref|XP_345235.2| PREDICTED: similar to (1881) 2948 617.8 1.8e-173
gi|94370127|ref|XP_622896.3| PREDICTED: similar to (1504) 2937 615.4 7.3e-173
gi|97180270|sp|Q9D2F7.2|P210L_MOUSE RecName: Full= (1881) 2937 615.5 8.7e-173
gi|194665312|ref|XP_001253717.2| PREDICTED: simila (1858) 2935 615.1 1.1e-172
gi|74747057|sp|Q5VU65.1|P210L_HUMAN RecName: Full= (1888) 2933 614.7 1.5e-172
gi|34535319|dbj|BAC87279.1| unnamed protein produc (1423) 2924 612.7 4.4e-172
gi|114559812|ref|XP_513837.2| PREDICTED: hypotheti (1888) 2919 611.8 1.1e-171
gi|34532201|dbj|BAC86345.1| unnamed protein produc (1591) 2893 606.4 4.1e-170
gi|50949320|emb|CAB55979.2| hypothetical protein [ ( 428) 2789 584.6 4e-164
gi|21739549|emb|CAD38812.1| hypothetical protein [ (1081) 2749 576.6 2.5e-161
gi|22761762|dbj|BAC11688.1| unnamed protein produc ( 418) 2700 566.2 1.3e-158
gi|119573623|gb|EAW53238.1| nucleoporin 210kDa-lik (1587) 2632 552.6 6.2e-154
gi|114559814|ref|XP_001144608.1| PREDICTED: hypoth (1736) 2618 549.8 4.9e-153
gi|118102172|ref|XP_001233384.1| PREDICTED: nucleo (1857) 2494 524.2 2.5e-145
gi|74178743|dbj|BAE34024.1| unnamed protein produc (1160) 2203 464.2 1.9e-127
gi|115653053|ref|XP_782857.2| PREDICTED: similar t (1872) 2011 424.8 2.2e-115
gi|210112018|gb|EEA59803.1| hypothetical protein B (1053) 1849 391.2 1.6e-105
gi|6599279|emb|CAB63757.1| hypothetical protein [H ( 684) 1809 382.9 3.3e-103
gi|55959264|emb|CAI14034.1| nucleoporin 210kDa-lik ( 669) 1798 380.6 1.6e-102
gi|210131363|gb|EEA79032.1| hypothetical protein B (1726) 1519 323.4 6.6e-85
gi|156218747|gb|EDO39640.1| predicted protein [Nem (1623) 1258 269.7 9.6e-69
gi|10438756|dbj|BAB15332.1| unnamed protein produc ( 465) 1183 253.8 1.6e-64
gi|119584558|gb|EAW64154.1| nucleoporin 210kDa, is ( 966) 1183 254.1 2.8e-64
gi|119584554|gb|EAW64150.1| nucleoporin 210kDa, is ( 967) 1183 254.1 2.8e-64
gi|45595564|gb|AAH67089.1| NUP210 protein [Homo sa ( 967) 1175 252.4 8.9e-64
gi|190588723|gb|EDV28745.1| hypothetical protein T (1883) 1147 246.8 8.2e-62
gi|198414653|ref|XP_002121532.1| PREDICTED: simila (1445) 992 214.8 2.7e-52
gi|215504456|gb|EEC13950.1| conserved hypothetical ( 530) 944 204.7 1.2e-49
gi|189535743|ref|XP_001919841.1| PREDICTED: simila ( 978) 926 201.1 2.5e-48
>>gi|18676550|dbj|BAB84927.1| FLJ00172 protein [Homo sap (1125 aa)
initn: 7257 init1: 7257 opt: 7257 Z-score: 8069.9 bits: 1505.1 E(): 0
Smith-Waterman score: 7257; 100.000% identity (100.000% similar) in 1125 aa overlap (1-1125:1-1125)
10 20 30 40 50 60
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAYDQEGRRFDNFSSLSIQWESTRPVLASIEPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAYDQEGRRFDNFSSLSIQWESTRPVLASIEPE
10 20 30 40 50 60
70 80 90 100 110 120
FLJ001 LPMQLVSQDDESGQKKLHGLQAILVHEASGTTAITATATGYQESHLSSARTKQPHDPLVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LPMQLVSQDDESGQKKLHGLQAILVHEASGTTAITATATGYQESHLSSARTKQPHDPLVP
70 80 90 100 110 120
130 140 150 160 170 180
FLJ001 LSASIELILVEDVRVSPEEVTIYNHPGIQAELRIREGSGYFFLNTSTADVVKVAYQEARG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LSASIELILVEDVRVSPEEVTIYNHPGIQAELRIREGSGYFFLNTSTADVVKVAYQEARG
130 140 150 160 170 180
190 200 210 220 230 240
FLJ001 VAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKTVKAYVRVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VAMVHPLLPGSSTIMIHDLCLVFPAPAKAVVYVSDIQELYIRVVDKVEIGKTVKAYVRVL
190 200 210 220 230 240
250 260 270 280 290 300
FLJ001 DLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQTSLTASVTN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 DLHKKPFLAKYFPFMDLKLRAASPIITLVALDEALDNYTITFLIRGVAIGQTSLTASVTN
250 260 270 280 290 300
310 320 330 340 350 360
FLJ001 KAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSISNESVALV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 KAGQRINSAPQQIEVFPPFRLMPRKVTLLIGATMQVTSEGGPQPQSNILFSISNESVALV
310 320 330 340 350 360
370 380 390 400 410 420
FLJ001 SAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRAPIMRMRTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SAAGLVQGLAIGNGTVSGLVQAVDAETGKVVIISQDLVQVEVLLLRAVRIRAPIMRMRTG
370 380 390 400 410 420
430 440 450 460 470 480
FLJ001 TQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLPSQYNFAMN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 TQMPIYVTGITNHQNPFSFGNAVPGLTFHWSVTKRDVLDLRGRHHEASIRLPSQYNFAMN
430 440 450 460 470 480
490 500 510 520 530 540
FLJ001 VLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIEAEQILMSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VLGRVKGRTGLRVVVKAVDPTSGQLYGLARELSDEIQVQVFEKLQLLNPEIEAEQILMSP
490 500 510 520 530 540
550 560 570 580 590 600
FLJ001 NSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVIAQEPFGAN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 NSYIKLQTNRDGAASLSYRVLDGPEKVPVVHVDEKGFLASGSMIGTSTIEVIAQEPFGAN
550 560 570 580 590 600
610 620 630 640 650 660
FLJ001 QTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGDVFHAHSSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 QTIIVAVKVSPVSYLRVSMSPVLHTQNKEALVAVPLGMTVTFTVHFHDNSGDVFHAHSSV
610 620 630 640 650 660
670 680 690 700 710 720
FLJ001 LNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPVLQAISPEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LNFATNRDDFVQIGKGPTNNTCVVRTVSVGLTLLRVWDAEHPGLSDFMPLPVLQAISPEL
670 680 690 700 710 720
730 740 750 760 770 780
FLJ001 SGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVTVYYEVAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SGAMVVGDVLCLATVLTSLEGLSGTWSSSANSILHIDPKTGVAVARAVGSVTVYYEVAGH
730 740 750 760 770 780
790 800 810 820 830 840
FLJ001 LRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTPTQREVIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LRTYKEVVVSVPQRIMARHLHPIQTSFQEATASKVIVAVGDRSSNLRGECTPTQREVIQA
790 800 810 820 830 840
850 860 870 880 890 900
FLJ001 LHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQRKHLSMKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LHPETLISCQSQFKPAVFDFPSQDVFTVEPQFDTALGQYFCSITMHRLTDKQRKHLSMKK
850 860 870 880 890 900
910 920 930 940 950 960
FLJ001 TALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGAPEVLENLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 TALVVSASLSSSHFSTEQVGAEVPFSPGLFADQAEILLSNHYTSSEIRVFGAPEVLENLE
910 920 930 940 950 960
970 980 990 1000 1010 1020
FLJ001 VKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTNQAIAIPVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VKSGSPAVLAFAKEKSFGWPSFITYTVGVLDPAAGSQGPLSTTLTFSSPVTNQAIAIPVT
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
FLJ001 VAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTPRDLAVPAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 VAFVVDRRGPGPYGASLFQHFLDSYQVMFFTLFALLAGTAVMIIAYHTVCTPRDLAVPAA
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120
FLJ001 LTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
:::::::::::::::::::::::::::::::::::::::::::::
gi|186 LTPRASPGHSPHYFAASSPTSPNALPPARKASPPSGLWSPAYASH
1090 1100 1110 1120
>>gi|119584555|gb|EAW64151.1| nucleoporin 210kDa, isofor (1886 aa)
initn: 7257 init1: 7257 opt: 7257 Z-score: 8066.7 bits: 1505.2 E(): 0
Smith-Waterman score: 7257; 100.000% identity (100.000% similar) in 1125 aa overlap (1-1125:762-1886)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::::::::::::::::::::::::::::::
gi|119 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|119 ASPPSGLWSPAYASH
1880
>>gi|119584556|gb|EAW64152.1| nucleoporin 210kDa, isofor (1887 aa)
initn: 7257 init1: 7257 opt: 7257 Z-score: 8066.7 bits: 1505.2 E(): 0
Smith-Waterman score: 7257; 100.000% identity (100.000% similar) in 1125 aa overlap (1-1125:763-1887)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::::::::::::::::::::::::::::::
gi|119 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|119 ASPPSGLWSPAYASH
1880
>>gi|116242720|sp|Q8TEM1.3|PO210_HUMAN RecName: Full=Nuc (1887 aa)
initn: 7249 init1: 7249 opt: 7249 Z-score: 8057.8 bits: 1503.6 E(): 0
Smith-Waterman score: 7249; 99.911% identity (99.911% similar) in 1125 aa overlap (1-1125:763-1887)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::::::::::::::::::::::: ::::::
gi|116 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPRLDLAAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|116 ASPPSGLWSPAYASH
1880
>>gi|168273116|dbj|BAG10397.1| nucleoporin 210kDa [synth (1887 aa)
initn: 7238 init1: 7238 opt: 7238 Z-score: 8045.6 bits: 1501.3 E(): 0
Smith-Waterman score: 7238; 99.822% identity (99.822% similar) in 1125 aa overlap (1-1125:763-1887)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::::::::::::::::::::::::::::::
gi|168 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
:::::::::::::::::::::::::::: :::::::::::::::::::::::::::::::
gi|168 DQEGRRFDNFSSLSIQWESTRPVLASIEAELPMQLVSQDDESGQKKLHGLQAILVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVS
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|168 ASPPSGLWSPAYASH
1880
>>gi|109034270|ref|XP_001083137.1| PREDICTED: similar to (1887 aa)
initn: 7137 init1: 7137 opt: 7137 Z-score: 7933.1 bits: 1480.5 E(): 0
Smith-Waterman score: 7137; 97.511% identity (99.822% similar) in 1125 aa overlap (1-1125:763-1887)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::.:::::::::::::::::::::::::::
gi|109 PFPAVEPAVVKFVCAPPSRLTLAPVYTSPQLDLSCPLLQQNKQVVPVSSHRNPLLDLAAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
:::::::::::::::::.::::::::::::.::::::::::::::::::::::::::.::
gi|109 TTAITATATGYQESHLSAARTKQPHDPLVPVSASIELILVEDVRVSPEEVTIYNHPGVQA
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ELRVREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
gi|109 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLQAASPIITLVA
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
:::.::::::::::.::.::::::::::::::::::::::::::::::::::::::::::
gi|109 LDEVLDNYTITFLIHGVTIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
::::::::::::::::::::::::::::::::::::.:::.:::::::::::::::::::
gi|109 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVRGLAVGNGTVSGLVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|109 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPVYVTGITNHQNPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
:::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::
gi|109 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKPVDPTSGQLYGLAR
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
gi|109 LVAVPLGMTVTFTVHFHDNSGDVFHAHNSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
:::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
gi|109 LTLLRVWDAEHPGLSDFVPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
gi|109 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVGVPQRIMARHLHPIQTSFQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|109 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPEALISCQSQFKPAVFDFPSQDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
:::.:::::::::::::::::::::::::::::::.::::::::::::::::::::::::
gi|109 QFDAALGQYFCSITMHRLTDKQRKHLSMKKTALVVTASLSSSHFSTEQVGAEVPFSPGLF
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
::::::::::::::::.:::::::::::::::::::::::::::::.:::::::::::.
gi|109 ADQAEILLSNHYTSSEVRVFGAPEVLENLEVKSGSPAVLAFAKEKSLGWPSFITYTVGIS
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::.::::::::::::::::.:::::.::::::::.:::::::::::::::::::::::::
gi|109 DPVAGSQGPLSTTLTFSSPATNQAITIPVTVAFVMDRRGPGPYGASLFQHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
gi|109 TLFALLAGTAVMIIAYHTVCTPRDLAVPTALTPRASPGHSPHYFAASSPTSPNALPPARK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|109 ASPPSGLWSPAYASH
1880
>>gi|30931086|gb|AAH52468.1| Nup210 protein [Mus musculu (1842 aa)
initn: 6163 init1: 6052 opt: 6196 Z-score: 6885.9 bits: 1286.7 E(): 0
Smith-Waterman score: 6196; 82.311% identity (95.644% similar) in 1125 aa overlap (1-1125:719-1842)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::.::::::::::::::::::::::::.::
gi|309 SISLSLLGPPASRNYQQHRVLMTCQALGEQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY
690 700 710 720 730 740
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::.::::::::::::::::.::.::::: . ::::::::: .:::::::::.. ::::::
gi|309 DQQGRRFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG
750 760 770 780 790 800
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:.
gi|309 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV
810 820 830 840 850 860
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
:: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.:::::::.
gi|309 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAI
870 880 890 900 910 920
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
..::::::::.::::::::::.:::::::::..::::::::: ::::::.::: :::::.
gi|309 IHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVT
930 940 950 960 970 980
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::: :::..:::::::::.::::.:.:::..:.::::::::::::.::::::.:
gi|309 LDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII
990 1000 1010 1020 1030 1040
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
:: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.:::::::::::
gi|309 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV
1050 1060 1070 1080 1090 1100
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
.:.:::::.:::: :.:::::::: :::::::::..:::::..:.:::::::::::::::
gi|309 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW
1110 1120 1130 1140 1150 1160
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::.::::: :::::::: :::::::::::::::.:::.:::.::..
gi|309 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGK
1170 1180 1190 1200 1210 1220
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
:::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.:
gi|309 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV
1230 1240 1250 1260 1270 1280
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
:.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.:::
gi|309 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA
1290 1300 1310 1320 1330 1340
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
:.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..::::::
gi|309 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG
1350 1360 1370 1380 1390 1400
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.::::::::
gi|309 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA
1410 1420 1430 1440 1450 1460
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
. .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.:::
gi|309 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA
1470 1480 1490 1500 1510 1520
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. :::::::
gi|309 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP
1530 1540 1550 1560 1570 1580
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::.
gi|309 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY
1590 1600 1610 1620 1630 1640
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
:.::::::::::::::..:::: : ::::::::::::::::.:::::: :::::::::::
gi|309 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL
1650 1660 1670 1680 1690 1700
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::.:::::::::.::::::.:::::.::::::::.::::::::::::..:::::::::::
gi|309 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF
1710 1720 1730 1740 1750 1760
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
:.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .::
gi|309 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK
1770 1780 1790 1800 1810 1820
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|309 ASPPSGLWSPAYASH
1830 1840
>>gi|97180293|sp|Q9QY81.2|PO210_MOUSE RecName: Full=Nucl (1886 aa)
initn: 6135 init1: 6052 opt: 6196 Z-score: 6885.8 bits: 1286.7 E(): 0
Smith-Waterman score: 6196; 82.311% identity (95.644% similar) in 1125 aa overlap (1-1125:763-1886)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::.::::::::::::::::::::::::.::
gi|971 PFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::.::::::::::::::::.::.::::: . ::::::::: .:::::::::.. ::::::
gi|971 DQQGRRFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:.
gi|971 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
:: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.:::::::.
gi|971 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAI
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
..::::::::.::::::::::.:::::::::..::::::::: ::::::.::: :::::.
gi|971 IHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVT
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::: :::..:::::::::.::::.:.:::..:.::::::::::::.::::::.:
gi|971 LDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
:: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.:::::::::::
gi|971 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
.:.:::::.:::: :.:::::::: :::::::::..:::::..:.:::::::::::::::
gi|971 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::.::::: :::::::: :::::::::::::::.:::.:::.::..
gi|971 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGK
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
:::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.:
gi|971 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
:.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.:::
gi|971 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
:.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..::::::
gi|971 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.::::::::
gi|971 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
. .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.:::
gi|971 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. :::::::
gi|971 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::.
gi|971 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
:.::::::::::::::..:::: : ::::::::::::::::.:::::: :::::::::::
gi|971 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::.:::::::::.::::::.:::::.::::::::.::::::::::::..:::::::::::
gi|971 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
:.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .::
gi|971 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|971 ASPPSGLWSPAYASH
1880
>>gi|148666876|gb|EDK99292.1| nucleoporin 210 [Mus muscu (1883 aa)
initn: 6130 init1: 6047 opt: 6191 Z-score: 6880.2 bits: 1285.7 E(): 0
Smith-Waterman score: 6191; 82.222% identity (95.644% similar) in 1125 aa overlap (1-1125:760-1883)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::.::::::::::::::::::::::::.::
gi|148 PFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY
730 740 750 760 770 780
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::.::::::::::::::::.::.::::: . ::::::::: .:::::::::.. ::::::
gi|148 DQQGRRFDNFSSLSIQWESSRPLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG
790 800 810 820 830 840
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:.
gi|148 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV
850 860 870 880 890 900
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
:: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.::::.::.
gi|148 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPTKAI
910 920 930 940 950 960
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
..::::::::.::::::::::.:::::::::..::::::::: ::::::.::: :::::.
gi|148 IHVSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLKLQAASQIITLVT
970 980 990 1000 1010 1020
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::: :::..:::::::::.::::.:.:::..:.::::::::::::.::::::.:
gi|148 LDEALDNYTATFLVHGVAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII
1030 1040 1050 1060 1070 1080
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
:: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.:::::::::::
gi|148 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV
1090 1100 1110 1120 1130 1140
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
.:.:::::.:::: :.:::::::: :::::::::..:::::..:.:::::::::::::::
gi|148 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW
1150 1160 1170 1180 1190 1200
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::.::::: :::::::: :::::::::::::::.:::.:::.::..
gi|148 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVVVKALDPTAGQLHGLGK
1210 1220 1230 1240 1250 1260
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
:::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.:
gi|148 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV
1270 1280 1290 1300 1310 1320
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
:.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.:::
gi|148 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA
1330 1340 1350 1360 1370 1380
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
:.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..::::::
gi|148 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG
1390 1400 1410 1420 1430 1440
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.::::::::
gi|148 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA
1450 1460 1470 1480 1490 1500
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
. .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.:::
gi|148 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA
1510 1520 1530 1540 1550 1560
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. :::::::
gi|148 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP
1570 1580 1590 1600 1610 1620
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::.
gi|148 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY
1630 1640 1650 1660 1670 1680
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
:.::::::::::::::..:::: : ::::::::::::::::.:::::: :::::::::::
gi|148 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL
1690 1700 1710 1720 1730 1740
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::.:::::::::.::::::.:::::.::::::::.::::::::::::..:::::::::::
gi|148 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF
1750 1760 1770 1780 1790 1800
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
:.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .::
gi|148 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK
1810 1820 1830 1840 1850 1860
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|148 ASPPSGLWSPAYASH
1870 1880
>>gi|6650678|gb|AAF21969.1|AF113751_1 nuclear pore membr (1886 aa)
initn: 6108 init1: 5995 opt: 6139 Z-score: 6822.3 bits: 1274.9 E(): 0
Smith-Waterman score: 6139; 81.689% identity (95.111% similar) in 1125 aa overlap (1-1125:763-1886)
10 20 30
FLJ001 LDMSCPLLQQNKQVVPVSSHRNPLLDLAAY
::.::::::::::::::::::::::::.::
gi|665 PFPAVEPTVVKSICAPPSRLTLMPVYALPQLDLSCPLLQQNKQVVPVSSHRNPLLDLGAY
740 750 760 770 780 790
40 50 60 70 80 90
FLJ001 DQEGRRFDNFSSLSIQWESTRPVLASIEPELPMQLVSQDDESGQKKLHGLQAILVHEASG
::.:::::::::::::::: .::::: . ::::::::: .:::::::::.. ::::::
gi|665 DQQGRRFDNFSSLSIQWESFPRLLASIELDQPMQLVSQDDGNGQKKLHGLQTVSVHEASG
800 810 820 830 840 850
100 110 120 130 140 150
FLJ001 TTAITATATGYQESHLSSARTKQPHDPLVPLSASIELILVEDVRVSPEEVTIYNHPGIQA
::::.:::::::.:::: ::.:::::::::.::::::::::::::::::.:::::::.:.
gi|665 TTAISATATGYQQSHLSEARVKQPHDPLVPVSASIELILVEDVRVSPEEMTIYNHPGVQV
860 870 880 890 900 910
160 170 180 190 200 210
FLJ001 ELRIREGSGYFFLNTSTADVVKVAYQEARGVAMVHPLLPGSSTIMIHDLCLVFPAPAKAV
:: : :::::::::::: :..:::::..::::.::::::::::.:.:::::.:::::::.
gi|665 ELYITEGSGYFFLNTSTQDIIKVAYQDTRGVALVHPLLPGSSTVMVHDLCLAFPAPAKAI
920 930 940 950 960 970
220 230 240 250 260 270
FLJ001 VYVSDIQELYIRVVDKVEIGKTVKAYVRVLDLHKKPFLAKYFPFMDLKLRAASPIITLVA
. .:::::::.::::::::::.:::::::::..::::::::: ::::. .::: :::::.
gi|665 IQLSDIQELYVRVVDKVEIGKAVKAYVRVLDFYKKPFLAKYFTFMDLNWQAASQIITLVT
980 990 1000 1010 1020 1030
280 290 300 310 320 330
FLJ001 LDEALDNYTITFLIRGVAIGQTSLTASVTNKAGQRINSAPQQIEVFPPFRLMPRKVTLLI
::::::::: :::..: :::::::.::::.:.:::..:.::::::::::::.::::::.:
gi|665 LDEALDNYTATFLVHGCAIGQTSLSASVTDKSGQRVSSTPQQIEVFPPFRLIPRKVTLII
1040 1050 1060 1070 1080 1090
340 350 360 370 380 390
FLJ001 GATMQVTSEGGPQPQSNILFSISNESVALVSAAGLVQGLAIGNGTVSGLVQAVDAETGKV
:: ::.::::::::::::::::.::::: ::..:::.:: .:::.: :.:::::::::::
gi|665 GAMMQITSEGGPQPQSNILFSINNESVAAVSSSGLVRGLMVGNGSVLGVVQAVDAETGKV
1100 1110 1120 1130 1140 1150
400 410 420 430 440 450
FLJ001 VIISQDLVQVEVLLLRAVRIRAPIMRMRTGTQMPIYVTGITNHQNPFSFGNAVPGLTFHW
.:.:::::.:::: :.:::::::: :::::::::..:::::..:.:::::::::::::::
gi|665 IIVSQDLVEVEVLQLQAVRIRAPITRMRTGTQMPVFVTGITSNQSPFSFGNAVPGLTFHW
1160 1170 1180 1190 1200 1210
460 470 480 490 500 510
FLJ001 SVTKRDVLDLRGRHHEASIRLPSQYNFAMNVLGRVKGRTGLRVVVKAVDPTSGQLYGLAR
::::::::::::::::.::::: :::::::: :::::::::::.:::.:::.:::.::..
gi|665 SVTKRDVLDLRGRHHEVSIRLPPQYNFAMNVYGRVKGRTGLRVLVKALDPTAGQLHGLGK
1220 1230 1240 1250 1260 1270
520 530 540 550 560 570
FLJ001 ELSDEIQVQVFEKLQLLNPEIEAEQILMSPNSYIKLQTNRDGAASLSYRVLDGPEKVPVV
:::::::.::::::.:::::::::::::::::.::::::::::: :::::::::::.:.:
gi|665 ELSDEIQIQVFEKLRLLNPEIEAEQILMSPNSFIKLQTNRDGAAILSYRVLDGPEKAPIV
1280 1290 1300 1310 1320 1330
580 590 600 610 620 630
FLJ001 HVDEKGFLASGSMIGTSTIEVIAQEPFGANQTIIVAVKVSPVSYLRVSMSPVLHTQNKEA
:.::::::.::: ::.::.:::::::::.::::.::::::::::::.:::::::::.:::
gi|665 HTDEKGFLVSGSGIGVSTLEVIAQEPFGTNQTILVAVKVSPVSYLRISMSPVLHTQHKEA
1340 1350 1360 1370 1380 1390
640 650 660 670 680 690
FLJ001 LVAVPLGMTVTFTVHFHDNSGDVFHAHSSVLNFATNRDDFVQIGKGPTNNTCVVRTVSVG
:.:.:::::::: :::::.:::.::::.:::::::::::::::::: :::::..::::::
gi|665 LTALPLGMTVTFIVHFHDSSGDIFHAHNSVLNFATNRDDFVQIGKGATNNTCIIRTVSVG
1400 1410 1420 1430 1440 1450
700 710 720 730 740 750
FLJ001 LTLLRVWDAEHPGLSDFMPLPVLQAISPELSGAMVVGDVLCLATVLTSLEGLSGTWSSSA
::::.:::.:: :::::.::::::::.::::::.::::.::::.::::: :.::::::::
gi|665 LTLLHVWDVEHLGLSDFVPLPVLQAITPELSGAVVVGDILCLASVLTSLGGVSGTWSSSA
1460 1470 1480 1490 1500 1510
760 770 780 790 800 810
FLJ001 NSILHIDPKTGVAVARAVGSVTVYYEVAGHLRTYKEVVVSVPQRIMARHLHPIQTSFQEA
. .:..:::::::.:: .::::::::.::.:.:.::.::..::.:.::.:: :::.:::
gi|665 SHVLYVDPKTGVAIARDAGSVTVYYEIAGQLKTFKEIVVGTPQKIVARRLHSAQTSIQEA
1520 1530 1540 1550 1560 1570
820 830 840 850 860 870
FLJ001 TASKVIVAVGDRSSNLRGECTPTQREVIQALHPETLISCQSQFKPAVFDFPSQDVFTVEP
::::: :.:::::::: :::.:.:::.:.:::::.::::: ::: :::::. :::::::
gi|665 TASKVTVSVGDRSSNLLGECSPAQREAIEALHPESLISCQLQFKQDVFDFPACDVFTVEP
1580 1590 1600 1610 1620 1630
880 890 900 910 920 930
FLJ001 QFDTALGQYFCSITMHRLTDKQRKHLSMKKTALVVSASLSSSHFSTEQVGAEVPFSPGLF
::.:::::.::.::.:::::: :::.::::.:.:.::. ::. :.:.:::::::::::.
gi|665 GFDAALGQYLCSVTMRRLTDKQLKHLNMKKTSLAVTASIPSSYTSVEKVGAEVPFSPGLY
1640 1650 1660 1670 1680 1690
940 950 960 970 980 990
FLJ001 ADQAEILLSNHYTSSEIRVFGAPEVLENLEVKSGSPAVLAFAKEKSFGWPSFITYTVGVL
:.::::::::::::::..:::: : ::::::::::::::::.:::::: :::::::::::
gi|665 ANQAEILLSNHYTSSEVKVFGAVESLENLEVKSGSPAVLAFVKEKSFGLPSFITYTVGVL
1700 1710 1720 1730 1740 1750
1000 1010 1020 1030 1040 1050
FLJ001 DPAAGSQGPLSTTLTFSSPVTNQAIAIPVTVAFVVDRRGPGPYGASLFQHFLDSYQVMFF
::.:::::::::.::::::.:::::.::::::::.::::::::::::..:::::::::::
gi|665 DPTAGSQGPLSTALTFSSPATNQAITIPVTVAFVLDRRGPGPYGASLLSHFLDSYQVMFF
1760 1770 1780 1790 1800 1810
1060 1070 1080 1090 1100 1110
FLJ001 TLFALLAGTAVMIIAYHTVCTPRDLAVPAALTPRASPGHSPHYFAASSPTSPNALPPARK
:.::::::::: ::::::::.::.:: : :::::::: :::::.: :::.. :.:: .::
gi|665 TFFALLAGTAVTIIAYHTVCAPRELASPLALTPRASPQHSPHYLA-SSPAAFNTLPSGRK
1820 1830 1840 1850 1860 1870
1120
FLJ001 ASPPSGLWSPAYASH
:::::::::::::::
gi|665 ASPPSGLWSPAYASH
1880
1125 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 15:57:41 2009 done: Fri Feb 27 16:06:59 2009
Total Scan time: 1210.230 Total Display time: 0.890
Function used was FASTA [version 34.26.5 April 26, 2007]