# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh07210.fasta.nr -Q ../query/FLJ00165.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00165, 146 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826539 sequences Expectation_n fit: rho(ln(x))= 4.7566+/-0.000181; mu= 9.3311+/- 0.010 mean_var=70.0461+/-13.544, 0's: 40 Z-trim: 42 B-trim: 0 in 0/66 Lambda= 0.153244 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676536|dbj|BAB84920.1| FLJ00165 protein [Homo ( 146) 1001 229.2 1.7e-58 gi|34222694|sp|Q8NET5.1|NFAM1_HUMAN RecName: Full= ( 270) 1001 229.5 2.6e-58 gi|114686698|ref|XP_001170811.1| PREDICTED: simila ( 270) 981 225.0 5.6e-57 gi|109094408|ref|XP_001107378.1| PREDICTED: simila ( 271) 870 200.5 1.4e-49 gi|149743374|ref|XP_001503055.1| PREDICTED: simila ( 255) 658 153.6 1.7e-35 gi|194667543|ref|XP_589601.3| PREDICTED: similar t ( 356) 650 152.0 7.3e-35 gi|149065770|gb|EDM15643.1| NFAT activating protei ( 190) 525 124.1 9.7e-27 gi|73969381|ref|XP_851965.1| PREDICTED: similar to ( 294) 481 114.5 1.1e-23 gi|109481077|ref|XP_343298.3| PREDICTED: similar t ( 362) 472 112.6 5.2e-23 gi|26339670|dbj|BAC33506.1| unnamed protein produc ( 213) 458 109.3 3e-22 gi|12852860|dbj|BAB29558.1| unnamed protein produc ( 224) 458 109.3 3.1e-22 gi|74215309|dbj|BAE41870.1| unnamed protein produc ( 228) 458 109.3 3.2e-22 gi|74221195|dbj|BAE42092.1| unnamed protein produc ( 251) 458 109.4 3.4e-22 gi|34222695|sp|Q8R4V1.1|NFAM1_MOUSE RecName: Full= ( 264) 458 109.4 3.5e-22 gi|74215136|dbj|BAE41800.1| unnamed protein produc ( 264) 457 109.2 4.1e-22 gi|74213216|dbj|BAE41741.1| unnamed protein produc ( 264) 455 108.7 5.6e-22 gi|74222738|dbj|BAE42235.1| unnamed protein produc ( 264) 452 108.1 8.9e-22 gi|152012867|gb|AAI50489.1| Nfam1 protein [Mus mus ( 213) 450 107.5 1e-21 gi|126339063|ref|XP_001371164.1| PREDICTED: simila ( 296) 323 79.6 3.7e-13 gi|149609702|ref|XP_001521294.1| PREDICTED: simila ( 248) 297 73.8 1.8e-11 gi|50728644|ref|XP_416217.1| PREDICTED: similar to ( 249) 263 66.3 3.2e-09 gi|148669301|gb|EDL01248.1| mCG129203 [Mus musculu ( 176) 250 63.3 1.8e-08 gi|149274524|ref|XP_001479416.1| PREDICTED: hypoth ( 199) 250 63.3 2e-08 gi|149065769|gb|EDM15642.1| NFAT activating protei ( 121) 236 60.0 1.2e-07 gi|119580908|gb|EAW60504.1| NFAT activating protei ( 195) 212 54.9 6.7e-06 gi|110645484|gb|AAI18746.1| LOC733570 protein [Xen ( 276) 186 49.3 0.00046 gi|89266912|emb|CAJ82229.1| novel protein [Xenopus ( 277) 186 49.3 0.00046 >>gi|18676536|dbj|BAB84920.1| FLJ00165 protein [Homo sap (146 aa) initn: 1001 init1: 1001 opt: 1001 Z-score: 1206.6 bits: 229.2 E(): 1.7e-58 Smith-Waterman score: 1001; 100.000% identity (100.000% similar) in 146 aa overlap (1-146:1-146) 10 20 30 40 50 60 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVGTALL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 ATGTYYCSVHWPHSTVRGSGTFILVRDAGYREPPQSPQKLLLFGFTGLLSVLSVVGTALL 10 20 30 40 50 60 70 80 90 100 110 120 FLJ001 LWNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGSSPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LWNKKRMRGPGKDPTRKCPDPRSASSPKQHPSESVYTALQRRETEVYACIENEDGSSPTA 70 80 90 100 110 120 130 140 FLJ001 KQSPLSQERPHRFEDDGELNLVYENL :::::::::::::::::::::::::: gi|186 KQSPLSQERPHRFEDDGELNLVYENL 130 140 >>gi|34222694|sp|Q8NET5.1|NFAM1_HUMAN RecName: Full=NFAT (270 aa) initn: 1001 init1: 1001 opt: 1001 Z-score: 1203.1 bits: 229.5 E(): 2.6e-58 Smith-Waterman score: 1001; 100.000% identity (100.000% similar) in 146 aa overlap (1-146:125-270) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY :::::::::::::::::::::::::::::: gi|342 KPTNCHPGLGTENQSHTLDCQVTLVLPGASATGTYYCSVHWPHSTVRGSGTFILVRDAGY 100 110 120 130 140 150 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|342 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH 160 170 180 190 200 210 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|342 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL 220 230 240 250 260 270 >>gi|114686698|ref|XP_001170811.1| PREDICTED: similar to (270 aa) initn: 981 init1: 981 opt: 981 Z-score: 1179.2 bits: 225.0 E(): 5.6e-57 Smith-Waterman score: 981; 97.945% identity (99.315% similar) in 146 aa overlap (1-146:125-270) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::::::::::::::::: :::::::::::: gi|114 KPTNCHPGLGTENQSHTLDCQVTLVLPGASATGTYYCSVHWPHSTVRDSGTFILVRDAGY 100 110 120 130 140 150 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|114 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWKKKRMRGPGKDPTRKCPDPRSASSPKQH 160 170 180 190 200 210 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL ::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|114 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNVVYENL 220 230 240 250 260 270 >>gi|109094408|ref|XP_001107378.1| PREDICTED: similar to (271 aa) initn: 870 init1: 870 opt: 870 Z-score: 1046.5 bits: 200.5 E(): 1.4e-49 Smith-Waterman score: 870; 86.986% identity (95.205% similar) in 146 aa overlap (1-146:126-271) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY :::::::::.:::.:: ::::::::::.:: gi|109 KPTICHPVLGTENQTRTLDCQVILVLPGASATGTYYCSVRWPHATVSGSGTFILVRDVGY 100 110 120 130 140 150 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH .::::::.::::::::::::::::::::::::.::.::::: :::::: :::::::::: gi|109 QEPPQSPRKLLLFGFTGLLSVLSVVGTALLLWKKKQMRGPGTDPTRKCLDPRSASSPKQP 160 170 180 190 200 210 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL ::::.::::::::::::::::.::: :::::::.:::: :::.::::.::::::: gi|109 PSESIYTALQRRETEVYACIESEDGCPPTAKQSPVSQERLHRFKDDGEFNLVYENL 220 230 240 250 260 270 >>gi|149743374|ref|XP_001503055.1| PREDICTED: similar to (255 aa) initn: 682 init1: 555 opt: 658 Z-score: 793.6 bits: 153.6 E(): 1.7e-35 Smith-Waterman score: 658; 66.438% identity (86.301% similar) in 146 aa overlap (1-146:111-255) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::::::::. : : :.:.:::::::: :: gi|149 KRTGCQLNPGKENQTSTQECRVTLKLPNASATGTYYCSISWAGSRVKGNGTFILVRDMGY 90 100 110 120 130 140 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH .::::.:::::: :::::.:::.: ::::::.::....: : :..::: : .::. .: gi|149 QEPPQDPQKLLLCCFTGLLTVLSIVVTALLLWKKKQIQAPRKPPAQKCPAPSTASGQEQP 150 160 170 180 190 200 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL :.::.::::::::::::.::.:: .: : . :. ::::. :::.::.:.:.::::: gi|149 PAESIYTALQRRETEVYSCIQNEANSLPFT-QGHLSQEKLHRFKDDSEFNMVYENL 210 220 230 240 250 >>gi|194667543|ref|XP_589601.3| PREDICTED: similar to NF (356 aa) initn: 625 init1: 544 opt: 650 Z-score: 782.1 bits: 152.0 E(): 7.3e-35 Smith-Waterman score: 650; 66.438% identity (84.247% similar) in 146 aa overlap (1-146:212-356) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::::::::::: : . : ::::::::.:: gi|194 KKISCQPGPGSENQTHTTACPIFLKLPNSSATGTYYCSVHWQDSRMIGEGTFILVRDTGY 190 200 210 220 230 240 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH .:::::::::::: :.:.:.:::...::::::.:... . : ...:: : ..::: : gi|194 QEPPQSPQKLLLFCFVGILAVLSILATALLLWKKRQIWALWKHAAKRCPGPSATSSPGQP 250 260 270 280 290 300 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL ::::::: ::::::::: ::..: :: ::. :. ::::. :.:: :::.::::::: gi|194 PSESVYTDLQRRETEVYDCIQSEAGSPPTS-QGLLSQEKQHKFEGDGEFNLVYENL 310 320 330 340 350 >>gi|149065770|gb|EDM15643.1| NFAT activating protein wi (190 aa) initn: 404 init1: 362 opt: 525 Z-score: 636.3 bits: 124.1 E(): 9.7e-27 Smith-Waterman score: 525; 56.849% identity (80.822% similar) in 146 aa overlap (1-146:47-190) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::::::: :. : : ...: ::::::.:: gi|149 SEKPIACQPRPGMENQTMDCMVQLSLPNASATGTYYCRVK-GHVTSQSDGIFILVRDTGY 20 30 40 50 60 70 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH . : . :. ::..::::::::.:.:::::.:.::.. :: .. ::.:. . . . gi|149 QPPSFKVQEALLLSFTGLLSVLGVLGTALLFWKKKQIAVLGKHTAKTCPSPKPTIGTTKP 80 90 100 110 120 130 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL :.::.::.:::::::::::::.: :: :...::: ..:. .: ::: :.::::::: gi|149 PAESIYTSLQRRETEVYACIEGETGS-PVSSQSPDTKEKMNRVEDDREFNLVYENL 140 150 160 170 180 190 >>gi|73969381|ref|XP_851965.1| PREDICTED: similar to NFA (294 aa) initn: 491 init1: 460 opt: 481 Z-score: 581.3 bits: 114.5 E(): 1.1e-23 Smith-Waterman score: 481; 57.692% identity (79.231% similar) in 130 aa overlap (1-130:118-246) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::::::: :.::. ..:.::::::.:: gi|739 KQVNCPPTQGKENQTYTLQCQVTLKLPNASATGTYYCCVNWPKVHRISDGVFILVRDTGY 90 100 110 120 130 140 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH : :::. :::::. :::::..::.. ::::::.:..:..: . :. : : : .:. .: gi|739 RGPPQNSQKLLLLCFTGLLTALSILVTALLLWKKRQMQAPREHPALKDPAPSAAARQEQP 150 160 170 180 190 200 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL : :::::.::::.::::.::.:: : : . :. ::: : gi|739 PEESVYTVLQRRDTEVYSCIQNEARSLPPT-QNLLSQTPPGEHFTETMVPPPIKAPAQQL 210 220 230 240 250 260 gi|739 VFMSRKKGKMLILSEVTAEKPAPVPHPL 270 280 290 >>gi|109481077|ref|XP_343298.3| PREDICTED: similar to NF (362 aa) initn: 404 init1: 362 opt: 472 Z-score: 569.3 bits: 112.6 E(): 5.2e-23 Smith-Waterman score: 472; 55.725% identity (80.916% similar) in 131 aa overlap (1-131:191-319) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::::::: :. : : ...: ::::::.:: gi|109 SEKPIACQPRPGMENQTMDCMVQLSLPNASATGTYYCRVK-GHVTSQSDGIFILVRDTGY 170 180 190 200 210 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH . : . :. ::..::::::::.:.:::::.:.::.. :: .. ::.:. . . . gi|109 QPPSFKVQEALLLSFTGLLSVLGVLGTALLFWKKKQIAVLGKHTAKTCPSPKPTIGTTKP 220 230 240 250 260 270 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL :.::.::.:::::::::::::.: :: :...::: ...::: gi|109 PAESIYTSLQRRETEVYACIEGETGS-PVSSQSPDTKDRPHCCEGYLGPSVHSRSVVIIF 280 290 300 310 320 330 gi|109 NAGEHRAVAYTGQSGESIRLPDVC 340 350 360 >>gi|26339670|dbj|BAC33506.1| unnamed protein product [M (213 aa) initn: 328 init1: 328 opt: 458 Z-score: 555.6 bits: 109.3 E(): 3e-22 Smith-Waterman score: 458; 52.055% identity (78.082% similar) in 146 aa overlap (1-146:70-213) 10 20 30 FLJ001 ATGTYYCSVHWPHSTVRGSGTFILVRDAGY ::: :: :. . : ...:. :::::. : gi|263 WEKQINCQHRPGMENHTRDCMVKLSQANTSATGIYYFIVE-GEETYQSDGVVILVRDTVY 40 50 60 70 80 90 40 50 60 70 80 90 FLJ001 REPPQSPQKLLLFGFTGLLSVLSVVGTALLLWNKKRMRGPGKDPTRKCPDPRSASSPKQH . : . :. :..:::.:.:::.:.:::::::.::.. :: .. : .:. . . gi|263 QPPAFKVQEALMLGFTSLMSVLGVLGTALLLWKKKQISVLGKHTAKTCSGLKSTVGTTKP 100 110 120 130 140 150 100 110 120 130 140 FLJ001 PSESVYTALQRRETEVYACIENEDGSSPTAKQSPLSQERPHRFEDDGELNLVYENL :.:::::.:::::::::::...: :: :. .::: ..:. .:::::.:.::::::: gi|263 PAESVYTSLQRRETEVYACMKEETGS-PVFSQSPATKEKLNRFEDDNEFNLVYENL 160 170 180 190 200 210 146 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 15:04:55 2009 done: Fri Feb 27 15:09:02 2009 Total Scan time: 590.340 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]