# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh06750.fasta.huge -Q ../query/FLJ00162.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00162, 449 aa vs ./tmplib.10216 library 2210545 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.0329+/-0.00328; mu= 17.0824+/- 0.222 mean_var=63.9164+/-14.002, 0's: 0 Z-trim: 3 B-trim: 0 in 0/40 Lambda= 0.160423 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0681 ( 538 res) hk02748 ( 538) 685 167.4 2.4e-42 KIAA1798 ( 781 res) fj20547 ( 781) 659 161.6 1.9e-40 KIAA1617 ( 904 res) fj13890 ( 904) 413 104.7 2.9e-23 KIAA1777 ( 954 res) fh19201x1 ( 954) 85 28.9 2.2 KIAA0132 ( 637 res) ha01449s1 ( 637) 81 27.7 3.2 KIAA0463 ( 1963 res) hg00942 (1963) 83 28.8 4.8 KIAA0208 ( 748 res) ha02713 ( 748) 78 27.1 5.7 FLJ00133 ( 1282 res) sh02303 (1282) 80 27.8 5.8 KIAA0983 ( 687 res) hj07256 ( 687) 77 26.8 6.3 KIAA1563 ( 1658 res) fh20460s1 (1658) 80 28.0 6.9 FLJ00383 ( 380 res) sj02824 ( 380) 74 25.8 7 KIAA1010 ( 1315 res) hj05262(revised) (1315) 79 27.6 7 KIAA1970 ( 519 res) fk07936 ( 519) 74 26.0 8.5 KIAA0140 ( 439 res) ha00520 ( 439) 73 25.7 9 KIAA1291 ( 1254 res) fh18869 (1254) 77 27.1 9.3 KIAA1363 ( 430 res) fj02385 ( 430) 72 25.4 10 KIAA0900 ( 503 res) hk09606s1 ( 503) 72 25.5 12 KIAA1310 ( 794 res) fh10589 ( 794) 72 25.8 15 KIAA0462 ( 2276 res) hg00891 (2276) 76 27.2 16 KIAA1596 ( 1151 res) fj09605 (1151) 73 26.2 17 KIAA1489 ( 511 res) fj07905 ( 511) 69 24.8 19 KIAA1175 ( 641 res) hg02720a ( 641) 69 25.0 22 KIAA1921 ( 545 res) fg00938 ( 545) 68 24.6 23 KIAA1900 ( 582 res) fk07650 ( 582) 68 24.7 24 KIAA0833 ( 1734 res) hg01719s1 (1734) 72 26.2 26 KIAA0229 ( 1180 res) ha02570 (1180) 70 25.5 27 KIAA1528 ( 740 res) hh03104(revised) ( 740) 68 24.8 28 FLJ00166 ( 454 res) sh07301 ( 454) 66 24.1 28 FLJ00029 ( 240 res) as00029 ( 240) 63 23.1 30 KIAA0112 ( 399 res) ha00609 ( 399) 65 23.8 30 KIAA0456 ( 1095 res) hg00633 (1095) 69 25.2 31 KIAA1669 ( 1405 res) fh18133 (1405) 70 25.6 31 KIAA1680 ( 902 res) fh23414 ( 902) 68 24.9 32 KIAA0860 ( 551 res) hk06518 ( 551) 66 24.2 32 KIAA0602 ( 962 res) hg01082b ( 962) 68 24.9 33 KIAA0181 ( 2079 res) ha02522s1 (2079) 71 26.0 34 KIAA0395 ( 1003 res) fg04028s1 (1003) 68 24.9 34 KIAA0923 ( 626 res) hh02882 ( 626) 66 24.2 34 KIAA1978 ( 384 res) fj03313 ( 384) 64 23.5 35 KIAA1967 ( 818 res) fj04244 ( 818) 67 24.6 35 FLJ00180 ( 499 res) sj01466 ( 499) 65 23.9 35 KIAA1393 ( 500 res) hj06562 ( 500) 65 23.9 35 KIAA0721 ( 433 res) hk01908 ( 433) 64 23.6 37 FLJ00016 ( 349 res) as00016 ( 349) 63 23.3 38 KIAA1709 ( 1028 res) fj18302 (1028) 67 24.7 40 KIAA0094 ( 394 res) ha01451 ( 394) 63 23.3 41 KIAA1740 ( 1119 res) pj00674 (1119) 67 24.8 43 KIAA1605 ( 922 res) fj10791 ( 922) 66 24.4 44 KIAA0366 ( 1201 res) hh00124 (1201) 67 24.8 45 KIAA1754 ( 594 res) pj02616 ( 594) 64 23.8 46 >>KIAA0681 ( 538 res) hk02748 (538 aa) initn: 622 init1: 330 opt: 685 Z-score: 853.7 bits: 167.4 E(): 2.4e-42 Smith-Waterman score: 685; 39.557% identity (63.291% similar) in 316 aa overlap (138-446:5-309) 110 120 130 140 150 160 FLJ001 NSKILVPPRTIHAKFTDWKGYLMKRLVGSRTLPVDFHI--KMVESMKYPFRQGMRLEVVD : ::.. . : : :. ::.:: .: KIAA06 QKAITAPVSLFQDSQAVTHNKNGFKLGMKLEGID 10 20 30 170 180 190 200 210 220 FLJ001 KSQVSRTRMAVVDTVIGGRLRLLYEDGDSD-DDFWCHMWSPLIHPVGWSRRVGHGIKMSE .. : . .: : : :::: . :: :. ::: . :: :::.:: ...:: .. . KIAA06 PQHPSMYFILTVAEVCGYRLRLHF-DGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPK 40 50 60 70 80 90 230 240 250 260 270 280 FLJ001 --RRSDMAHHPTFRKIYCDAVP-YLFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVAT .. ... .:. .:.: .:: . : :. ::::::.: .: . .:::. KIAA06 GYKEEEFSWSQYLRSTRAQAAPKHLFVSQSHSPPPLG-FQVGMKLEAVDRMNPSLVCVAS 100 110 120 130 140 150 290 300 310 320 330 340 FLJ001 VCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGY-EAQTF : :. :. ... :. : :..: :: : :. .:::. ::::. : . ..: KIAA06 VTDVV-DSRFLVHFDNW--DDTYDYWC-DPSSPYIHPVGWCQKQGKPLTPPQDYPDPDNF 160 170 180 190 200 350 360 370 380 390 400 FLJ001 NWENYLEKTKSKAAPSRLFNMDCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSI ::.:::.: ..:.:. :.. : :.: :.::::::: .: :: ::.:. : . ..: KIAA06 CWEKYLEETGASAVPTWAFKVR-PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKI 210 220 230 240 250 260 410 420 430 440 FLJ001 HFDGWDSEYDQWVDCESPDIYPVGWCELTGYQLQPPVAAGVGSRGPKRL :::::. :: :.: . :::.:.::: ::. ::::. : : : KIAA06 HFDGWSHGYDFWIDADHPDIHPAGWCSKTGHPLQPPL----GPREPSSASPGGCPPLSYR 270 280 290 300 310 320 KIAA06 SLPHTRTSKYSFHHRKCPTPGCDGSGHVTGKFTAHHCLSGCPLAERNQSRLKAELSDSEA 330 340 350 360 370 380 >>KIAA1798 ( 781 res) fj20547 (781 aa) initn: 823 init1: 318 opt: 659 Z-score: 819.3 bits: 161.6 E(): 1.9e-40 Smith-Waterman score: 659; 36.826% identity (64.072% similar) in 334 aa overlap (113-438:225-546) 90 100 110 120 130 140 FLJ001 ENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIHAKFTDWKGYLMKRLVGSRTLPVD .::. .: : .:: .. . ..:. KIAA17 MENKQDVRILRGSQRARRKRRGDSAVLKQGLPPKGKKAWC--WASYLEEE--KAVAVPAK 200 210 220 230 240 250 150 160 170 180 190 FLJ001 FHIKMVESMKYP---FRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYEDGDSD-DDF . .: .:. : :. ::.:: :: . : . .: : : :..: . :: :: :: KIAA17 L-FKEHQSFPYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHF-DGYSDCYDF 260 270 280 290 300 200 210 220 230 240 250 FLJ001 WCHMWSPLIHPVGWSRRVGHGIKMSE--RRSDMAHHPTFRKIYCDAVPY-LFKKVRAVYT : . . :::::: ...:: .. . .. .. . .. .:.: ::.. . KIAA17 WVNADALDIHPVGWCEKTGHKLHPPKGYKEEEFNWQTYLKTCKAQAAPKSLFENQNITVI 310 320 330 340 350 360 260 270 280 290 300 310 FLJ001 EGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHA .: :. ::::::.: : . :::::: ..:. ... :. .. :..: .::: KIAA17 PSG-FRVGMKLEAVDKKNPSFICVATVTD-MVDNRFLVHFDNW--DESYDYWC-EASSPH 370 380 390 400 410 420 320 330 340 350 360 370 FLJ001 IFPATFCQKNDIELTPPKGY-EAQTFNWENYLEKTKSKAAPSRLFNMDCPNHGFKVGMKL : :. .:... : : :: ... :.:..:::.:.: ::.: :.. : :::. ::: KIAA17 IHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFKVK-PPHGFQKKMKL 430 440 450 460 470 480 380 390 400 410 420 430 FLJ001 EAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDCESPDIYPVGWCELTGYQLQ :.:: .: .: :::: . . ...:::::.. :: :.: .::::.::::: ::. :: KIAA17 EVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQ 490 500 510 520 530 540 440 FLJ001 PPVAAGVGSRGPKRL ::.. KIAA17 PPLSPLELMEASEHGGCSTPGCKGIGHFKRARHLGPHSAANCPYSEINLNKDRIFPDRLS 550 560 570 580 590 600 >>KIAA1617 ( 904 res) fj13890 (904 aa) initn: 711 init1: 326 opt: 413 Z-score: 510.9 bits: 104.7 E(): 2.9e-23 Smith-Waterman score: 802; 35.452% identity (61.858% similar) in 409 aa overlap (45-436:87-487) 20 30 40 50 60 70 FLJ001 SPVSTVSSLSRYTLIATQVPLYDQWEDVMKGMKVEVLNSDAVLPSRVYWIASVIQTAGYR :::.:: :.. :. .::.:..: : : KIAA16 GEYLEETGASAAPHTSFKHVEISIQSNFQPGMKLEVANKNN--PD-TYWVATIITTCGQL 60 70 80 90 100 110 80 90 100 110 120 130 FLJ001 VLLRYEGFENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIHAKFTDWKGYLMKRLV .:::: :. .: ::::.. .:.::.:::. :.:.:.:: .:. :.::: .:.. :. KIAA16 LLLRYCGYGEDRRADFWCDVVIADLHPVGWCTQNNKVLMPPDAIKEKYTDWTEFLIRDLT 120 130 140 150 160 170 140 150 160 170 180 FLJ001 GSRTLPVDFHIKMVESMKYPFRQ---GMRLEVVDKSQVSRTRMAVVDTVIGGRLRLLY-- :::: :... .. : :. : .:. :... . .. : .:::::: : KIAA16 GSRTAPANL-LEGPLRGKGPIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVG 180 190 200 210 220 230 190 200 210 220 230 240 FLJ001 -EDGDSDDDFWCHMWSPLIHPVGWSR----RVGHGIKMSERRSDMAHHPTFRKIYCDAVP :: .: :. : . . ..:::: . :. .. . . :..: ::. KIAA16 LEDTESYDQ-WLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKMASEWKCTLEKSLIDAAK 240 250 260 270 280 290 250 260 270 280 290 FLJ001 Y-----LFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDG-G . .:: . .. .: :::::... . : :.: ::. . .... .: KIAA16 FPLPMEVFKDHADLRSH--FFTVGMKLETVNMCEPFYISPASVTKVFNNHFFQVTIDDLR 300 310 320 330 340 300 310 320 330 340 350 FLJ001 PSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYEAQTFNWENYLEKTKSKAAPSRL : . :. .: ::.: .:.:. .: :: . ::::::: .: :.: .: .. .. :: KIAA16 PEPSKLSMLC-HADSLGILPVQWCLKNGVSLTPPKGYSGQDFDWADYHKQHGAQEAPPFC 350 360 370 380 390 400 360 370 380 390 400 410 FLJ001 FNMDCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEYDQW-VDCES : ..:: .::::::. .: .:::.: : ::. .:..: .. . :: :: KIAA16 FRNTSFSRGFTKNMKLEAVNPRNPGELCVASVVSVKGRLMWLHLEGLQTPVPEVIVDVES 410 420 430 440 450 460 420 430 440 FLJ001 PDIYPVGWCELTGYQLQPPVAAGVGSRGPKRL ::.:::::: ..: : : KIAA16 MDIFPVGWCEANSYPLTAPHKTVSQKKRKIAVVQPEKQLPPTVPVKKIPHDLCLFPHLDT 470 480 490 500 510 520 >>KIAA1777 ( 954 res) fh19201x1 (954 aa) initn: 141 init1: 51 opt: 85 Z-score: 100.3 bits: 28.9 E(): 2.2 Smith-Waterman score: 85; 22.785% identity (56.962% similar) in 79 aa overlap (162-238:102-171) 140 150 160 170 180 190 FLJ001 RLVGSRTLPVDFHIKMVESMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYED :..:.:. ..: . .... : :: KIAA17 IALRCKARPAMQIFFKCNGEWVHQNEHVSEETLDESSGLKVREVFINVT-----RQQVED 80 90 100 110 120 200 210 220 230 240 FLJ001 GDSDDDFWCH--MWSPLIHPVGWSRRVGHGIKMSERRSDMAHHPTFRKIYCDAVPYLFKK . .:.::. :: : : :. ..... :... . : :.. KIAA17 FHGPEDYWCQCVAWSHL----GTSKSRKASVRIAYLRKNFEQDPQGREVPIEGMIVLHCR 130 140 150 160 170 180 250 260 270 280 290 300 FLJ001 VRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCY KIAA17 PPEGVPAAEVEWLKNEEPIDSEQDENIDTRADHNLIIRQARLSDSGNYTCMAANIVAKRR 190 200 210 220 230 240 >>KIAA0132 ( 637 res) ha01449s1 (637 aa) initn: 43 init1: 43 opt: 81 Z-score: 97.4 bits: 27.7 E(): 3.2 Smith-Waterman score: 81; 36.232% identity (60.870% similar) in 69 aa overlap (231-298:324-385) 210 220 230 240 250 260 FLJ001 HMWSPLIHPVGWSRRVGHGIKMSERRSDMAHHPTFRKIYCDAVPYLFKKVRAVYTEGGWF :.:: . . : : : : : .:: ::.: KIAA01 LQMQLQKCEILQSDSRCKDYLVKIFEELTLHKPT-QVMPCRA-P---KVGRLIYTAGGYF 300 310 320 330 340 270 280 290 300 310 FLJ001 EEGMK-LEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHAIFPA ..... ::: .: . . .: . .: .: : :: :: KIAA01 RQSLSYLEAYNPSDGTWLRLADL-QVPRSG-LAGCVVGGLLYAVGGRNNSPDGNTDSSAL 350 360 370 380 390 400 320 330 340 350 360 370 FLJ001 TFCQKNDIELTPPKGYEAQTFNWENYLEKTKSKAAPSRLFNMDCPNHGFKVGMKLEAVDL KIAA01 DCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLV 410 420 430 440 450 460 >>KIAA0463 ( 1963 res) hg00942 (1963 aa) initn: 99 init1: 51 opt: 83 Z-score: 94.2 bits: 28.8 E(): 4.8 Smith-Waterman score: 83; 26.000% identity (54.000% similar) in 50 aa overlap (209-258:939-988) 180 190 200 210 220 230 FLJ001 TVIGGRLRLLYEDGDSDDDFWCHMWSPLIHPVGWSRRVGHGIKMSERRSDMAHHPTFRKI : : .: . ::.... :..::: . KIAA04 SPSSPWLDWSSHNVKCSNPQITEILTVSGPPEGGTRVTIHGVNLGLDFSEIAHHVQVAGV 910 920 930 940 950 960 240 250 260 270 280 290 FLJ001 YCDAVPYLFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGG : .: . .. . : : KIAA04 PCTPLPGEYIIAEQIVCEMGHALVGTTSGPVRLCIGECKPEFMTKSHQQYTFVNPSVLSL 970 980 990 1000 1010 1020 >>KIAA0208 ( 748 res) ha02713 (748 aa) initn: 98 init1: 66 opt: 78 Z-score: 92.8 bits: 27.1 E(): 5.7 Smith-Waterman score: 78; 38.889% identity (52.778% similar) in 36 aa overlap (299-332:100-134) 270 280 290 300 310 320 FLJ001 IDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDG--LDWFCYHASSHAIFPATFCQKND : .: ..:. .:: :: :: : KIAA02 QRPSYKFFFKSMDDDFGVVKEEISDDNAKLPCFNGRVVSWLVSAEGSHPD-PAPFCADNP 70 80 90 100 110 120 330 340 350 360 370 380 FLJ001 IELTPPKGYEAQTFNWENYLEKTKSKAAPSRLFNMDCPNHGFKVGMKLEAVDLMEPRLIC :: :: KIAA02 SELPPPMERTGGIGDSRPPSFHPHAGGGSQENLDNDTETDSLVSAQRERPRRRDGPEHAT 130 140 150 160 170 180 >>FLJ00133 ( 1282 res) sh02303 (1282 aa) initn: 83 init1: 54 opt: 80 Z-score: 92.6 bits: 27.8 E(): 5.8 Smith-Waterman score: 82; 26.190% identity (48.810% similar) in 84 aa overlap (294-367:535-612) 270 280 290 300 310 320 FLJ001 MKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTD-GLDWFCYHASSHAIFPATFC ::.:: : :.::. .: . . : FLJ001 HYIGKYKCDCPPGFSGRHCEIAPSPCFRSPCVNGGTCEDRDTDFFCH---CQAGYMGRRC 510 520 530 540 550 560 330 340 350 360 370 FLJ001 QKNDIELTPPKGYEAQTFNWENY---------LEKTKSKAAPSRLFNMDCPNHGFKVGMK : ... ::. . :. ... .. : .::::. : :: FLJ001 QA-EVDCGPPEEVKHATLRFNGTRLGAVALYACDRGYSLSAPSRIRV--CQPHGVWSEPP 570 580 590 600 610 380 390 400 410 420 430 FLJ001 LEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEYDQWVDCESPDIYPVGWCELTGYQL FLJ001 QCLEIDECRSQPCLHGGSCQDRVAGYLCLCSTGYEGAHCELERDECRAHPCRNGGSCRNL 620 630 640 650 660 670 >>KIAA0983 ( 687 res) hj07256 (687 aa) initn: 50 init1: 50 opt: 77 Z-score: 92.0 bits: 26.8 E(): 6.3 Smith-Waterman score: 77; 23.077% identity (50.549% similar) in 91 aa overlap (324-410:179-263) 300 310 320 330 340 350 FLJ001 CVDGGPSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYEAQTFNWENYLEKTKSKA : .. . :. ..:: ::. : : KIAA09 TKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWE--LEQRKRLA 150 160 170 180 190 200 360 370 380 390 400 FLJ001 APSRLFNMDCPNHGFKV----GMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDSEY : .: .. :. .: : .. ..::: . .. :.. : . :: ..: KIAA09 EKYR----ECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQY 210 220 230 240 250 260 410 420 430 440 FLJ001 DQWVDCESPDIYPVGWCELTGYQLQPPVAAGVGSRGPKRL . KIAA09 ETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKALFKPPEDSQDDESDSDAEE 270 280 290 300 310 320 >>KIAA1563 ( 1658 res) fh20460s1 (1658 aa) initn: 72 init1: 44 opt: 80 Z-score: 91.3 bits: 28.0 E(): 6.9 Smith-Waterman score: 80; 27.907% identity (52.326% similar) in 86 aa overlap (178-263:1229-1306) 150 160 170 180 190 200 FLJ001 VESMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYEDGDSDDDFWCHMWSPLI : ...:. : . .:: . .. :. : KIAA15 YEGNFHLNKMMGNGVLLSEDDTIYEGEFSDDWTLSGKGTLTMPNGDYIEGYFSGEWGSGI 1200 1210 1220 1230 1240 1250 210 220 230 240 250 260 FLJ001 HPVGWSRRVGHGIKMSERRSDMAHHPTFRKIYCDAVPYLFKKVRAVYTEGGWFEEGMKLE . .: .: : .:: . .:::. ::: .: .::. : : . : KIAA15 ------KITGTYFKPSLYESDKDRPKVFRKLGNLAVPAD-EKWKAVFDEC-WRQLGCEGP 1260 1270 1280 1290 1300 1310 270 280 290 300 310 320 FLJ001 AIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFCYHASSHAIFPATFCQKNDI KIAA15 GQGEVWKAWDNIAVALTTSRRQHRDSPEILSRSQTQTLESLEFIPQHVGAFSVEKYDDIR 1320 1330 1340 1350 1360 1370 449 residues in 1 query sequences 2210545 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:42:34 2009 done: Fri Feb 27 10:42:35 2009 Total Scan time: 0.530 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]