# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sh06511.fasta.nr -Q ../query/FLJ00369.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00369, 700 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7814213 sequences Expectation_n fit: rho(ln(x))= 6.0773+/-0.000198; mu= 10.1919+/- 0.011 mean_var=114.3446+/-21.836, 0's: 35 Z-trim: 77 B-trim: 268 in 2/64 Lambda= 0.119941 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|21748584|dbj|BAC03429.1| FLJ00369 protein [Homo ( 700) 4970 871.1 0 gi|119577484|gb|EAW57080.1| Rho guanine nucleotide ( 389) 2539 450.2 6.4e-124 gi|54035184|gb|AAH34013.2| Rho guanine nucleotide ( 927) 2544 451.4 6.6e-124 gi|34395524|sp|Q92888.2|ARHG1_HUMAN RecName: Full= ( 912) 2493 442.6 3e-121 gi|1654344|gb|AAB17896.1| guanine nucleotide excha ( 912) 2483 440.8 9.8e-121 gi|38114846|gb|AAH05155.2| ARHGEF1 protein [Homo s ( 861) 2159 384.8 7.1e-104 gi|148692356|gb|EDL24303.1| Rho guanine nucleotide (1017) 2151 383.4 2.1e-103 gi|148692358|gb|EDL24305.1| Rho guanine nucleotide ( 957) 2141 381.7 6.7e-103 gi|194306549|ref|NP_001123623.1| Rho guanine nucle ( 976) 2108 376.0 3.5e-101 gi|30583681|gb|AAP36089.1| Rho guanine nucleotide ( 853) 2104 375.2 5.2e-101 gi|32880111|gb|AAP88886.1| Rho guanine nucleotide ( 854) 2104 375.2 5.2e-101 gi|148692357|gb|EDL24304.1| Rho guanine nucleotide ( 956) 2104 375.3 5.6e-101 gi|34395521|sp|Q61210.2|ARHG1_MOUSE RecName: Full= ( 920) 2098 374.2 1.1e-100 gi|194675259|ref|XP_591046.4| PREDICTED: similar t ( 932) 2096 373.9 1.4e-100 gi|47847518|dbj|BAD21431.1| mFLJ00369 protein [Mus ( 939) 2096 373.9 1.4e-100 gi|74152406|dbj|BAE33947.1| unnamed protein produc ( 979) 2086 372.2 5e-100 gi|11276027|gb|AAG33860.1|AF314539_1 LSC [Rattus n ( 919) 2081 371.3 8.6e-100 gi|60552426|gb|AAH91218.1| Rho guanine nucleotide ( 919) 2074 370.1 2e-99 gi|34395515|sp|Q9Z1I6.1|ARHG1_RAT RecName: Full=Rh ( 919) 2074 370.1 2e-99 gi|2196872|emb|CAA70356.1| sub1.5 [Homo sapiens] ( 869) 2011 359.1 3.7e-96 gi|15079852|gb|AAH11726.1| Rho guanine nucleotide ( 879) 1768 317.1 1.7e-83 gi|45595654|gb|AAH67262.1| ARHGEF1 protein [Homo s ( 948) 1768 317.1 1.8e-83 gi|194235939|ref|XP_001499586.2| PREDICTED: Rho gu ( 301) 1754 314.3 4.1e-83 gi|74009559|ref|XP_541596.2| PREDICTED: similar to ( 850) 1675 301.0 1.1e-78 gi|60593483|pdb|1SHZ|C Chain C, Crystal Structure ( 233) 1534 276.1 9.9e-72 gi|119577486|gb|EAW57082.1| Rho guanine nucleotide ( 750) 1424 257.5 1.2e-65 gi|15826509|pdb|1IAP|A Chain A, Crystal Structure ( 211) 1394 251.8 1.8e-64 gi|134025364|gb|AAI35245.1| LOC100037905 protein [ (1054) 1026 188.8 8.6e-45 gi|166796267|gb|AAI59121.1| LOC100037905 protein [ (1049) 963 177.9 1.6e-41 gi|109126748|ref|XP_001118386.1| PREDICTED: simila ( 122) 795 148.0 1.9e-33 gi|108742147|gb|AAI17616.1| Zgc:136551 [Danio reri ( 433) 725 136.3 2.1e-29 gi|118101911|ref|XP_417890.2| PREDICTED: similar t (1614) 659 125.4 1.5e-25 gi|112418516|gb|AAI21928.1| Rho guanine nucleotide (1417) 649 123.7 4.6e-25 gi|34391897|gb|AAP43996.1| guanine nucleotide exch (1450) 643 122.6 9.7e-25 gi|194378346|dbj|BAG57923.1| unnamed protein produ (1078) 636 121.3 1.8e-24 gi|194385582|dbj|BAG65168.1| unnamed protein produ (1278) 636 121.4 2e-24 gi|77362757|dbj|BAD89994.2| guanine nucleotide exc (1544) 637 121.6 2.1e-24 gi|47218512|emb|CAF98044.1| unnamed protein produc ( 190) 624 118.5 2.1e-24 gi|119587913|gb|EAW67509.1| Rho guanine nucleotide (1428) 636 121.4 2.2e-24 gi|34395525|sp|Q9NZN5.1|ARHGC_HUMAN RecName: Full= (1544) 636 121.4 2.3e-24 gi|119587912|gb|EAW67508.1| Rho guanine nucleotide (1557) 636 121.4 2.4e-24 gi|213626350|gb|AAI70436.1| Unknown (protein for M (1431) 635 121.2 2.5e-24 gi|126326889|ref|XP_001380299.1| PREDICTED: simila (1545) 634 121.1 3e-24 gi|114640825|ref|XP_508820.2| PREDICTED: Rho guani (1441) 633 120.9 3.2e-24 gi|114640823|ref|XP_001166795.1| PREDICTED: Rho gu (1525) 633 120.9 3.3e-24 gi|114640821|ref|XP_001166830.1| PREDICTED: Rho gu (1544) 633 120.9 3.4e-24 gi|73955010|ref|XP_536546.2| PREDICTED: similar to (1708) 619 118.5 1.9e-23 gi|38649079|gb|AAH63117.1| ARHGEF12 protein [Homo ( 573) 612 116.9 2e-23 gi|162319632|gb|AAI56559.1| Rho guanine nucleotide (1544) 617 118.2 2.3e-23 gi|148693599|gb|EDL25546.1| Rho guanine nucleotide (1553) 617 118.2 2.3e-23 >>gi|21748584|dbj|BAC03429.1| FLJ00369 protein [Homo sap (700 aa) initn: 4970 init1: 4970 opt: 4970 Z-score: 4651.0 bits: 871.1 E(): 0 Smith-Waterman score: 4970; 100.000% identity (100.000% similar) in 700 aa overlap (1-700:1-700) 10 20 30 40 50 60 FLJ003 GGAEARRKDTLSSSFSRVIGMDVTEPGSGSRDPGPGIAEPDLGRPAGHLRADTSPAEPRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GGAEARRKDTLSSSFSRVIGMDVTEPGSGSRDPGPGIAEPDLGRPAGHLRADTSPAEPRE 10 20 30 40 50 60 70 80 90 100 110 120 FLJ003 MEDFARGAASPGPSRPGLVPVSIIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 MEDFARGAASPGPSRPGLVPVSIIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLM 70 80 90 100 110 120 130 140 150 160 170 180 FLJ003 ALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 ALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAF 130 140 150 160 170 180 190 200 210 220 230 240 FLJ003 ELDRTRADLISEDVQRRFVQEVVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 ELDRTRADLISEDVQRRFVQEVVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVG 190 200 210 220 230 240 250 260 270 280 290 300 FLJ003 RDRASYEARERHVAERLLMHLEEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RDRASYEARERHVAERLLMHLEEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKS 250 260 270 280 290 300 310 320 330 340 350 360 FLJ003 GRNFFRKKVMGNRRSDEPAKTKKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GRNFFRKKVMGNRRSDEPAKTKKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATD 310 320 330 340 350 360 370 380 390 400 410 420 FLJ003 RKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 RKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESL 370 380 390 400 410 420 430 440 450 460 470 480 FLJ003 APPESTDEGAETERCPGWGAGAGGVAYWALVGGCRVTAAICACLSQALAPHAPLLLSGSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 APPESTDEGAETERCPGWGAGAGGVAYWALVGGCRVTAAICACLSQALAPHAPLLLSGSG 430 440 450 460 470 480 490 500 510 520 530 540 FLJ003 HSSPFFFPFLISLLLPHCPPFLLSFLFPLLLPLLPFFTNPSPPPFLSTTPSIFLYFPPSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 HSSPFFFPFLISLLLPHCPPFLLSFLFPLLLPLLPFFTNPSPPPFLSTTPSIFLYFPPSL 490 500 510 520 530 540 550 560 570 580 590 600 FLJ003 SHLPPPLFPPHSSLTWVFFPHLPSPSDLPATFHFFSPSSPFSFKPPCPLPPTPRLAPASW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SHLPPPLFPPHSSLTWVFFPHLPSPSDLPATFHFFSPSSPFSFKPPCPLPPTPRLAPASW 550 560 570 580 590 600 610 620 630 640 650 660 FLJ003 CPSLNPPPLCSVPWGPCPPYSWGAGSASCPSLCRCFGDPLVGAGRWVRFHLGPPLTLCPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 CPSLNPPPLCSVPWGPCPPYSWGAGSASCPSLCRCFGDPLVGAGRWVRFHLGPPLTLCPS 610 620 630 640 650 660 670 680 690 700 FLJ003 LPRRWKRWVPGPWVGEGLAPPPFLPAPPLSPWPLPPLHSL :::::::::::::::::::::::::::::::::::::::: gi|217 LPRRWKRWVPGPWVGEGLAPPPFLPAPPLSPWPLPPLHSL 670 680 690 700 >>gi|119577484|gb|EAW57080.1| Rho guanine nucleotide exc (389 aa) initn: 2531 init1: 2531 opt: 2539 Z-score: 2381.0 bits: 450.2 E(): 6.4e-124 Smith-Waterman score: 2539; 98.958% identity (98.958% similar) in 384 aa overlap (61-440:1-384) 40 50 60 70 80 90 FLJ003 RDPGPGIAEPDLGRPAGHLRADTSPAEPREMEDFARGAASPGPSRPGLVPVSIIGAEDED :::::::::::::::::::::::::::::: gi|119 MEDFARGAASPGPSRPGLVPVSIIGAEDED 10 20 30 100 110 120 130 140 150 FLJ003 FENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPK 40 50 60 70 80 90 160 170 180 190 200 210 FLJ003 EAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAV 100 110 120 130 140 150 220 230 240 250 260 270 FLJ003 GRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIST 160 170 180 190 200 210 280 290 300 310 320 330 FLJ003 DEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILD 220 230 240 250 260 270 340 350 360 370 380 390 FLJ003 AARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLS 280 290 300 310 320 330 400 410 420 430 440 FLJ003 LDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETERCPG----WGAGAGGVA ::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|119 LDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETERCPGYQGVWGAQRACG 340 350 360 370 380 450 460 470 480 490 500 FLJ003 YWALVGGCRVTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPFLLSFL >>gi|54035184|gb|AAH34013.2| Rho guanine nucleotide exch (927 aa) initn: 2567 init1: 2542 opt: 2544 Z-score: 2380.7 bits: 451.4 E(): 6.6e-124 Smith-Waterman score: 2544; 98.964% identity (99.223% similar) in 386 aa overlap (53-437:8-393) 30 40 50 60 70 80 FLJ003 VTEPGSGSRDPGPGIAEPDLGRPAGHLRADTSPAEPREMEDFARGAASPGPSRPGLVPVS .::::::::::::::::::::::::::::: gi|540 MASLSTWSSPAEPREMEDFARGAASPGPSRPGLVPVS 10 20 30 90 100 110 120 130 140 FLJ003 IIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 IIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHAD 40 50 60 70 80 90 150 160 170 180 190 200 FLJ003 MLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 MLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEV 100 110 120 130 140 150 210 220 230 240 250 260 FLJ003 VQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 VQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLE 160 170 180 190 200 210 270 280 290 300 310 320 FLJ003 EMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 EMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTK 220 230 240 250 260 270 330 340 350 360 370 380 FLJ003 KGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|540 KGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTP 280 290 300 310 320 330 390 400 410 420 430 440 FLJ003 GVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETER-CPGWGAG ::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|540 GVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGE 340 350 360 370 380 390 450 460 470 480 490 500 FLJ003 AGGVAYWALVGGCRVTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPF gi|540 PGRSGLELEPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLF 400 410 420 430 440 450 >>gi|34395524|sp|Q92888.2|ARHG1_HUMAN RecName: Full=Rho (912 aa) initn: 2516 init1: 2491 opt: 2493 Z-score: 2333.1 bits: 442.6 E(): 3e-121 Smith-Waterman score: 2493; 99.206% identity (99.206% similar) in 378 aa overlap (61-437:1-378) 40 50 60 70 80 90 FLJ003 RDPGPGIAEPDLGRPAGHLRADTSPAEPREMEDFARGAASPGPSRPGLVPVSIIGAEDED :::::::::::::::::::::::::::::: gi|343 MEDFARGAASPGPSRPGLVPVSIIGAEDED 10 20 30 100 110 120 130 140 150 FLJ003 FENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 FENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPK 40 50 60 70 80 90 160 170 180 190 200 210 FLJ003 EAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 EAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAV 100 110 120 130 140 150 220 230 240 250 260 270 FLJ003 GRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 GRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIST 160 170 180 190 200 210 280 290 300 310 320 330 FLJ003 DEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 DEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILD 220 230 240 250 260 270 340 350 360 370 380 390 FLJ003 AARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|343 AARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLS 280 290 300 310 320 330 400 410 420 430 440 FLJ003 LDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETER-CPGWGAGAGGVAYWA ::::::::::::::::::::::::::::::::::::::::::: :: gi|343 LDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGLEL 340 350 360 370 380 390 450 460 470 480 490 500 FLJ003 LVGGCRVTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPFLLSFLFPL gi|343 EPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECL 400 410 420 430 440 450 >>gi|1654344|gb|AAB17896.1| guanine nucleotide exchange (912 aa) initn: 2506 init1: 2481 opt: 2483 Z-score: 2323.8 bits: 440.8 E(): 9.8e-121 Smith-Waterman score: 2483; 98.677% identity (98.942% similar) in 378 aa overlap (61-437:1-378) 40 50 60 70 80 90 FLJ003 RDPGPGIAEPDLGRPAGHLRADTSPAEPREMEDFARGAASPGPSRPGLVPVSIIGAEDED :::::::::::::::::::::::::::::: gi|165 MEDFARGAASPGPSRPGLVPVSIIGAEDED 10 20 30 100 110 120 130 140 150 FLJ003 FENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 FENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPK 40 50 60 70 80 90 160 170 180 190 200 210 FLJ003 EAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 EAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAV 100 110 120 130 140 150 220 230 240 250 260 270 FLJ003 GRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 GRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIST 160 170 180 190 200 210 280 290 300 310 320 330 FLJ003 DEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILD ::::::::::::::::::::::::::::::::::::::::::::::.: ::::::::::: gi|165 DEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDDPPKTKKGLSSILD 220 230 240 250 260 270 340 350 360 370 380 390 FLJ003 AARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|165 AARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLS 280 290 300 310 320 330 400 410 420 430 440 FLJ003 LDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETER-CPGWGAGAGGVAYWA ::::::::::::::::::::::::::::::::::::::::::: :: gi|165 LDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGLEL 340 350 360 370 380 390 450 460 470 480 490 500 FLJ003 LVGGCRVTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPFLLSFLFPL gi|165 EPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAECL 400 410 420 430 440 450 >>gi|38114846|gb|AAH05155.2| ARHGEF1 protein [Homo sapie (861 aa) initn: 2182 init1: 2157 opt: 2159 Z-score: 2021.1 bits: 384.8 E(): 7.1e-104 Smith-Waterman score: 2159; 99.083% identity (99.083% similar) in 327 aa overlap (112-437:1-327) 90 100 110 120 130 140 FLJ003 SIIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHA :::::::::::::::::::::::::::::: gi|381 VKRRPAHLMALLQHVALQFEPGPLLCCLHA 10 20 30 150 160 170 180 190 200 FLJ003 DMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|381 DMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQE 40 50 60 70 80 90 210 220 230 240 250 260 FLJ003 VVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|381 VVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHL 100 110 120 130 140 150 270 280 290 300 310 320 FLJ003 EEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|381 EEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKT 160 170 180 190 200 210 330 340 350 360 370 380 FLJ003 KKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|381 KKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDT 220 230 240 250 260 270 390 400 410 420 430 440 FLJ003 PGVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETER-CPGWGA :::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|381 PGVSLHPLSLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEG 280 290 300 310 320 330 450 460 470 480 490 500 FLJ003 GAGGVAYWALVGGCRVTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPP gi|381 EPGRSGLELEPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDL 340 350 360 370 380 390 >>gi|148692356|gb|EDL24303.1| Rho guanine nucleotide exc (1017 aa) initn: 2097 init1: 1870 opt: 2151 Z-score: 2012.7 bits: 383.4 E(): 2.1e-103 Smith-Waterman score: 2152; 79.567% identity (88.462% similar) in 416 aa overlap (23-437:11-417) 10 20 30 40 50 60 FLJ003 GGAEARRKDTLSSSFSRVIGMDVTEPGSGSRDPGPGIAEPDLGRPAGHLRADTSPAEPRE : :: :: .: : : : . : :: .:. : gi|148 LPARQSQEAGVGTPGPGSPSPTSG-ASP-VTSPRGH-----QPGGVLE 10 20 30 40 70 80 90 100 110 120 FLJ003 MEDFARGAASPGPSRPGLVPVSIIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLM : . : ::: ::: : ::: . ::::::::::::::.:::.::::::::::::::::::: gi|148 MGEVAGGAA-PGPPRSGLVSI-IIGAEDEDFENELEANSEDQNSQFQSLEQVKRRPAHLM 50 60 70 80 90 130 140 150 160 170 180 FLJ003 ALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAF ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::.::: gi|148 ALLQHVALQFEPGPLLCCLHADMLSSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPSVAF 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 ELDRTRADLISEDVQRRFVQEVVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVG :::::: :::::::::::.::::::::.::.:::::::::::::::::::::. :: :.: gi|148 ELDRTRPDLISEDVQRRFIQEVVQSQQAAVSRQLEDFRSKRLMGMTPWEQELSLLEPWIG 160 170 180 190 200 210 250 260 270 280 290 300 FLJ003 RDRASYEARERHVAERLLMHLEEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKS .::..::::::::::::: :::: :::::::::::::::.::.::::::::::::::::: gi|148 KDRGNYEARERHVAERLLSHLEETQHTISTDEEKSAAVVTAISLYMRHLGVRTKSGDKKS 220 230 240 250 260 270 310 320 330 340 350 360 FLJ003 GRNFFRKKVMGNRRSDEPAKTKKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATD :::::::::::::::::: ::::::::::: ::::::::..:: ::::.:.:::::: .: gi|148 GRNFFRKKVMGNRRSDEPPKTKKGLSSILDPARWNRGEPSAPDCRHLKVEADAEKPGPAD 280 290 300 310 320 330 370 380 390 400 410 FLJ003 RKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPD-REPGADAPLELGDSSPQGPMSLES ::::.:: ::::..:.::::.::::::::: :: : ::::.:.: : ::. :::: ::: gi|148 RKGGLGMSSRDRTVGTPGQDNPGVSLHPLSTDSVDSREPGVDTPQEPGDTPPQGPTSLEP 340 350 360 370 380 390 420 430 440 450 460 470 FLJ003 LAPPESTDEGAETERCPGWGAGAGGVAYWALVGGCRVTAAICACLSQALAPHAPLLLSGS :::::::....:::: : gi|148 LAPPESTEDNGETERLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPGSA 400 410 420 430 440 450 >>gi|148692358|gb|EDL24305.1| Rho guanine nucleotide exc (957 aa) initn: 2087 init1: 1870 opt: 2141 Z-score: 2003.7 bits: 381.7 E(): 6.7e-103 Smith-Waterman score: 2142; 79.376% identity (88.249% similar) in 417 aa overlap (23-437:7-414) 10 20 30 40 50 60 FLJ003 GGAEARRKDTLSSSFSRVIGMDVTEPGSGSRDPGPGIAEPDLGRPAGHLRADTSPAEPRE : :: :: .: : : : . : :: .:. : gi|148 QSQEAGVGTPGPGSPSPTSG-ASP-VTSPRGH-----QPGGVLE 10 20 30 70 80 90 100 110 120 FLJ003 MEDFARGAASPGPSRPGLVPVSIIGAEDEDFENELETNSEEQNSQFQSLEQVKRRPAHLM : . : ::: ::: : ::: . ::::::::::::::.:::.::::::::::::::::::: gi|148 MGEVAGGAA-PGPPRSGLVSI-IIGAEDEDFENELEANSEDQNSQFQSLEQVKRRPAHLM 40 50 60 70 80 90 130 140 150 160 170 180 FLJ003 ALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPNVAF ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::.::: gi|148 ALLQHVALQFEPGPLLCCLHADMLSSLGPKEAKKAFLDFYHSFLEKTAVLRVPVPPSVAF 100 110 120 130 140 150 190 200 210 220 230 240 FLJ003 ELDRTRADLISEDVQRRFVQEVVQSQQVAVGRQLEDFRSKRLMGMTPWEQELAQLEAWVG :::::: :::::::::::.::::::::.::.:::::::::::::::::::::. :: :.: gi|148 ELDRTRPDLISEDVQRRFIQEVVQSQQAAVSRQLEDFRSKRLMGMTPWEQELSLLEPWIG 160 170 180 190 200 210 250 260 270 280 290 300 FLJ003 RDRASYEARERHVAERLLMHLEEMQHTISTDEEKSAAVVNAIGLYMRHLGVRTKSGDKKS .::..::::::::::::: :::: :::::::::::::::.::.::::::::::::::::: gi|148 KDRGNYEARERHVAERLLSHLEETQHTISTDEEKSAAVVTAISLYMRHLGVRTKSGDKKS 220 230 240 250 260 270 310 320 330 340 350 360 FLJ003 GRNFFRKKVMGNRRSDEPAKTKKGLSSILDAARWNRGEPQVPDFRHLKAEVDAEKPGATD :::::::::::::::::: ::::::::::: ::::::::..:: ::::.:.:::::: .: gi|148 GRNFFRKKVMGNRRSDEPPKTKKGLSSILDPARWNRGEPSAPDCRHLKVEADAEKPGPAD 280 290 300 310 320 330 370 380 390 400 410 FLJ003 RKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPD-REPGADAPLELGDSSPQGPMSLES ::::.:: ::::..:.::::.::::::::: :: : ::::.:.: : ::. :::: ::: gi|148 RKGGLGMSSRDRTVGTPGQDNPGVSLHPLSTDSVDSREPGVDTPQEPGDTPPQGPTSLEP 340 350 360 370 380 390 420 430 440 450 460 470 FLJ003 LAPPESTDEGAETER-CPGWGAGAGGVAYWALVGGCRVTAAICACLSQALAPHAPLLLSG :::::::....::: :: gi|148 LAPPESTEDNGETESPEPGDDGEPGRSGLELEPEEPPGWRELVPPDTLLSLPKSQVKRQE 400 410 420 430 440 450 >>gi|194306549|ref|NP_001123623.1| Rho guanine nucleotid (976 aa) initn: 2050 init1: 1870 opt: 2108 Z-score: 1972.7 bits: 376.0 E(): 3.5e-101 Smith-Waterman score: 2108; 84.409% identity (93.548% similar) in 372 aa overlap (67-437:6-376) 40 50 60 70 80 90 FLJ003 IAEPDLGRPAGHLRADTSPAEPREMEDFARGAASPGPSRPGLVPVSIIGAEDEDFENELE :.:.::: : ::: . :::::::::::::: gi|194 MGEVAGGAAPGPPRSGLVSI-IIGAEDEDFENELE 10 20 30 100 110 120 130 140 150 FLJ003 TNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGPKEAKKAF .:::.:::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|194 ANSEDQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLSSLGPKEAKKAF 40 50 60 70 80 90 160 170 180 190 200 210 FLJ003 LDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVAVGRQLED ::::::::::::::::::::.::::::::: :::::::::::.::::::::.::.::::: gi|194 LDFYHSFLEKTAVLRVPVPPSVAFELDRTRPDLISEDVQRRFIQEVVQSQQAAVSRQLED 100 110 120 130 140 150 220 230 240 250 260 270 FLJ003 FRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTISTDEEKSA ::::::::::::::::. :: :.:.::..::::::::::::: :::: :::::::::::: gi|194 FRSKRLMGMTPWEQELSLLEPWIGKDRGNYEARERHVAERLLSHLEETQHTISTDEEKSA 160 170 180 190 200 210 280 290 300 310 320 330 FLJ003 AVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSILDAARWNR :::.::.::::::::::::::::::::::::::::::::::: ::::::::::: ::::: gi|194 AVVTAISLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPPKTKKGLSSILDPARWNR 220 230 240 250 260 270 340 350 360 370 380 390 FLJ003 GEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPLSLDSPD- :::..:: ::::.:.:::::: .:::::.:: ::::..:.::::.::::::::: :: : gi|194 GEPSAPDCRHLKVEADAEKPGPADRKGGLGMSSRDRTVGTPGQDNPGVSLHPLSTDSVDS 280 290 300 310 320 330 400 410 420 430 440 450 FLJ003 REPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETERCPGWGAGAGGVAYWALVGGCR ::::.:.: : ::. :::: ::: :::::::....:::: : gi|194 REPGVDTPQEPGDTPPQGPTSLEPLAPPESTEDNGETERLSGRLGRSESLRVSDRRRPSR 340 350 360 370 380 390 460 470 480 490 500 510 FLJ003 VTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPFLLSFLFPLLLPLLP gi|194 GSLGAKGRGGGRSRSDVDMDPGSATAVLGPTRRATPEPGDDGEPGRSGLELEPEEPPGWR 400 410 420 430 440 450 >>gi|30583681|gb|AAP36089.1| Rho guanine nucleotide exch (853 aa) initn: 2127 init1: 2102 opt: 2104 Z-score: 1969.7 bits: 375.2 E(): 5.2e-101 Smith-Waterman score: 2104; 99.060% identity (99.060% similar) in 319 aa overlap (120-437:1-319) 90 100 110 120 130 140 FLJ003 DFENELETNSEEQNSQFQSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLGSLGP :::::::::::::::::::::::::::::: gi|305 MALLQHVALQFEPGPLLCCLHADMLGSLGP 10 20 30 150 160 170 180 190 200 FLJ003 KEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KEAKKAFLDFYHSFLEKTAVLRVPVPPNVAFELDRTRADLISEDVQRRFVQEVVQSQQVA 40 50 60 70 80 90 210 220 230 240 250 260 FLJ003 VGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 VGRQLEDFRSKRLMGMTPWEQELAQLEAWVGRDRASYEARERHVAERLLMHLEEMQHTIS 100 110 120 130 140 150 270 280 290 300 310 320 FLJ003 TDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 TDEEKSAAVVNAIGLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSDEPAKTKKGLSSIL 160 170 180 190 200 210 330 340 350 360 370 380 FLJ003 DAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 DAARWNRGEPQVPDFRHLKAEVDAEKPGATDRKGGVGMPSRDRNIGAPGQDTPGVSLHPL 220 230 240 250 260 270 390 400 410 420 430 440 FLJ003 SLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETER-CPGWGAGAGGVAYW :::::::::::::::::::::::::::::::::::::::::::: :: gi|305 SLDSPDREPGADAPLELGDSSPQGPMSLESLAPPESTDEGAETESPEPGDEGEPGRSGLE 280 290 300 310 320 330 450 460 470 480 490 500 FLJ003 ALVGGCRVTAAICACLSQALAPHAPLLLSGSGHSSPFFFPFLISLLLPHCPPFLLSFLFP gi|305 LEPEEPPGWRELVPPDTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLHDLFFQPMAEC 340 350 360 370 380 390 700 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 22:07:23 2009 done: Fri Feb 27 22:15:12 2009 Total Scan time: 1034.620 Total Display time: 0.190 Function used was FASTA [version 34.26.5 April 26, 2007]