# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh06256.fasta.huge -Q ../query/FLJ00367.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00367, 75 aa vs ./tmplib.10216 library 2210919 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.6395+/-0.00346; mu= 5.2672+/- 0.234 mean_var=64.9028+/-13.981, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.159200 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1377 ( 988 res) fj04709 ( 988) 95 30.3 0.14 KIAA1537 ( 619 res) fj02581s1 ( 619) 76 25.7 2 KIAA1050 ( 829 res) hh03308 ( 829) 76 25.8 2.5 KIAA0131 ( 942 res) ha01235 ( 942) 76 25.9 2.8 KIAA0835 ( 1167 res) hj05861 (1167) 76 26.0 3.3 FLJ00074 ( 191 res) as00074 ( 191) 66 23.0 4.2 KIAA1742 ( 1301 res) pj01304s1 (1301) 72 25.1 6.7 KIAA0785 ( 706 res) hk05482 ( 706) 69 24.2 6.9 KIAA1498 ( 1731 res) hh01611 (1731) 73 25.4 7.1 KIAA1904 ( 821 res) af00058 ( 821) 69 24.2 7.7 KIAA0445 ( 1919 res) hg00102s1 (1919) 72 25.2 8.9 KIAA0634 ( 1321 res) hj03064 (1321) 70 24.6 9.3 KIAA1194 ( 575 res) fg00908 ( 575) 66 23.4 9.5 FLJ00240 ( 383 res) sj07454 ( 383) 64 22.8 9.7 KIAA1731 ( 2056 res) bf02656 (2056) 71 25.0 11 KIAA0871 ( 471 res) hk06991 ( 471) 64 22.9 11 KIAA0264 ( 415 res) ha07040 ( 415) 62 22.4 14 FLJ00264 ( 644 res) sj01648 ( 644) 63 22.8 17 KIAA0925 ( 479 res) hh02949 ( 479) 61 22.2 18 KIAA1108 ( 763 res) hh03387s1 ( 763) 63 22.8 19 KIAA1785 ( 617 res) fh12727 ( 617) 62 22.5 19 KIAA1835 ( 623 res) fh08795s1 ( 623) 62 22.5 19 KIAA0478 ( 1253 res) hh05955 (1253) 65 23.5 20 FLJ00123 ( 255 res) sh00869 ( 255) 57 21.0 22 KIAA0764 ( 419 res) hk04750 ( 419) 59 21.7 23 KIAA1100 ( 444 res) hk07907 ( 444) 59 21.7 24 KIAA0841 ( 641 res) hk04975 ( 641) 60 22.1 27 KIAA0390 ( 1312 res) hj00075 (1312) 63 23.0 28 KIAA1878 ( 453 res) pj01649 ( 453) 58 21.5 28 KIAA0631 ( 729 res) hh01881s1 ( 729) 60 22.1 29 KIAA0678 ( 2257 res) ef02254 (2257) 65 23.7 30 KIAA1503 ( 4464 res) hk03643y1 (4464) 68 24.6 31 KIAA1702 ( 530 res) fj15966 ( 530) 58 21.5 32 KIAA1481 ( 1380 res) fj05724 (1380) 62 22.8 34 KIAA1697 ( 2182 res) fj14406y2 (2182) 64 23.5 35 KIAA0268 ( 1193 res) ha07061 (1193) 61 22.5 36 KIAA0979 ( 1483 res) hj07056s1 (1483) 62 22.8 36 KIAA0289 ( 1302 res) ha06244 (1302) 61 22.6 38 KIAA0985 ( 697 res) hj08038 ( 697) 58 21.6 39 KIAA0194 ( 1435 res) ha02703 (1435) 61 22.6 41 KIAA1699 ( 966 res) fj15278 ( 966) 59 22.0 42 KIAA0171 ( 655 res) ha02502 ( 655) 57 21.4 44 KIAA1574 ( 670 res) fh24775 ( 670) 57 21.4 44 FLJ00310 ( 291 res) sh06047 ( 291) 53 20.2 45 KIAA1276 ( 1068 res) fh00139s1 (1068) 59 22.0 45 KIAA0851 ( 607 res) hk06032 ( 607) 56 21.1 48 KIAA1082 ( 1787 res) fg06837 (1787) 61 22.7 48 KIAA1254 ( 758 res) hh14357s1 ( 758) 57 21.4 48 KIAA0949 ( 1559 res) af07325 (1559) 60 22.4 51 KIAA1272 ( 1023 res) hk07611 (1023) 58 21.8 52 >>KIAA1377 ( 988 res) fj04709 (988 aa) initn: 86 init1: 63 opt: 95 Z-score: 121.7 bits: 30.3 E(): 0.14 Smith-Waterman score: 95; 36.986% identity (63.014% similar) in 73 aa overlap (1-67:28-95) 10 20 FLJ003 NLPLHRRFTELW------LPTAMSKSAVKISLD :::. :: : : ::.:.::. : . . KIAA13 KAVSRKPVPPLEEALKQIQESNLKSEVNLPFSRRPTINWRAIDSALPSALSKNDHKHQKQ 10 20 30 40 50 60 30 40 50 60 70 FLJ003 LLSNPLCEQDQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKK :::. ::.... :: ..: :. ..: : :... :: KIAA13 LLSKINCEKEMNE-NMRATLATSK---NVF-QLKLEETQKLLEDQHLSNLQKFCDEVNQI 70 80 90 100 110 KIAA13 TNSETLSSIDSLEATEHEEIYLTLNKEHSTSIQRNTISLKPANMQSTNLSCFDEDKLAFS 120 130 140 150 160 170 >>KIAA1537 ( 619 res) fj02581s1 (619 aa) initn: 47 init1: 47 opt: 76 Z-score: 100.8 bits: 25.7 E(): 2 Smith-Waterman score: 76; 28.333% identity (63.333% similar) in 60 aa overlap (24-75:168-227) 10 20 30 40 50 FLJ003 NLPLHRRFTELWLPTAMSKSAVKISLDLLSNPLCEQDQDLLNMVTALDTAM-- ..:.... :: . .:: ..: ..: .: KIAA15 LIIQRDLLSEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQVGVIDFSMYL 140 150 160 170 180 190 60 70 FLJ003 -KRMDAFNQEKVNQI-----QKTVIEPLKK .. : :.:. :: ::. .: :.. KIAA15 KNEEDIGNKERNVQIAAILDQKNYVEELNRQLNSTVSSLHSRVDSLEKSNTKLIEELAIA 200 210 220 230 240 250 >>KIAA1050 ( 829 res) hh03308 (829 aa) initn: 44 init1: 44 opt: 76 Z-score: 99.1 bits: 25.8 E(): 2.5 Smith-Waterman score: 76; 30.159% identity (65.079% similar) in 63 aa overlap (8-69:765-824) 10 20 30 FLJ003 NLPLHRRFTEL-WLPTAMSKSAVKISLDLLSNPLCEQ : :: : :. .: ..: : . .:.::: KIAA10 QLQSQISSMEKNLKNIEEENKLIEEQNEALFLELSGLSQALIQSLANIRLPHM-EPICEQ 740 750 760 770 780 790 40 50 60 70 FLJ003 DQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKK . : .:..: .. .: :.. ...:...: KIAA10 NFD--AYVSTLTDMYSNQDPENKDLLESIKQAVRGIQV 800 810 820 >>KIAA0131 ( 942 res) ha01235 (942 aa) initn: 65 init1: 65 opt: 76 Z-score: 98.4 bits: 25.9 E(): 2.8 Smith-Waterman score: 76; 45.714% identity (77.143% similar) in 35 aa overlap (30-63:142-176) 10 20 30 40 50 FLJ003 NLPLHRRFTELWLPTAMSKSAVKISLDLLSNPLCEQDQD-LLNMVTALDTAMKRMDAFN : : .: :: ::..:. :.:: : ..:.. KIAA01 ESAALSEVLAGPLAQRLSHIAEDVGRLVKKSRDLEQQLQDELLEVVSELQTAKKTYQAYH 120 130 140 150 160 170 60 70 FLJ003 QEKVNQIQKTVIEPLKK .:.:: KIAA01 MESVNAEAKLREAERQEEKRAGRSVPTTTAGATEAGPLRKSSLKKGGRLVEKRQAKFMEH 180 190 200 210 220 230 >>KIAA0835 ( 1167 res) hj05861 (1167 aa) initn: 44 init1: 44 opt: 76 Z-score: 97.1 bits: 26.0 E(): 3.3 Smith-Waterman score: 76; 30.159% identity (65.079% similar) in 63 aa overlap (8-69:1103-1162) 10 20 30 FLJ003 NLPLHRRFTEL-WLPTAMSKSAVKISLDLLSNPLCEQ : :: : :. .: ..: : . .:.::: KIAA08 QLQSQISSMEKNLKNIEEENKLIEEQNEALFLELSGLSQALIQSLANIRLPHM-EPICEQ 1080 1090 1100 1110 1120 1130 40 50 60 70 FLJ003 DQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKK . : .:..: .. .: :.. ...:...: KIAA08 NFD--AYVSTLTDMYSNQDPENKDLLESIKQAVRGIQV 1140 1150 1160 >>FLJ00074 ( 191 res) as00074 (191 aa) initn: 66 init1: 66 opt: 66 Z-score: 95.1 bits: 23.0 E(): 4.2 Smith-Waterman score: 66; 31.250% identity (65.625% similar) in 32 aa overlap (35-66:82-113) 10 20 30 40 50 60 FLJ003 HRRFTELWLPTAMSKSAVKISLDLLSNPLCEQDQDLLNMVTALDTAMKRMDAFNQEKVNQ ::...: :.. .. .: : :: ..: FLJ000 CDSLTWEENEDTLLLWEDFTNCNPTIDLQGEQEENLGNLIHETESFFKTRDKEYQETIGQ 60 70 80 90 100 110 70 FLJ003 IQKTVIEPLKK :. FLJ000 IELELATAKSDMNRHLHEYMEMCSMKRGLDVQMETCRRLIKGSADRNSPSPSSVASSDSG 120 130 140 150 160 170 >>KIAA1742 ( 1301 res) pj01304s1 (1301 aa) initn: 48 init1: 48 opt: 72 Z-score: 91.5 bits: 25.1 E(): 6.7 Smith-Waterman score: 72; 31.915% identity (63.830% similar) in 47 aa overlap (7-53:334-378) 10 20 30 FLJ003 NLPLHRRFTELWLPTAMSKSAVKISLDLLSNPLCEQ ... :.::: . : . : :: :..: KIAA17 QSSAIYQLLHFLLDRDFLSPQTTDYQVPSLKYSLLFLPTPKGASLMDIYLDRLATPWGLA 310 320 330 340 350 360 40 50 60 70 FLJ003 DQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKK :. . ::..: ..:. KIAA17 DN--YTSVTGMDLGLKQELLRHFLVQDTVYPLLALVAIFFGMALYLRSLFLTLMVLLGVL 370 380 390 400 410 420 >>KIAA0785 ( 706 res) hk05482 (706 aa) initn: 41 init1: 41 opt: 69 Z-score: 91.3 bits: 24.2 E(): 6.9 Smith-Waterman score: 69; 27.119% identity (61.017% similar) in 59 aa overlap (16-74:457-514) 10 20 30 40 FLJ003 NLPLHRRFTELWLPTAMSKSAVKISLDLLSNPLCEQDQDLLNMVT .:.: .. :. . : :. .::..: KIAA07 RYPTISMVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDM-FLNVAT 430 440 450 460 470 480 50 60 70 FLJ003 ALDTAMKRMDAFNQEKVNQIQKTVIEPLKK :: .::. .. . .:... :.: : KIAA07 FLDPRYKRLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLM 490 500 510 520 530 540 >>KIAA1498 ( 1731 res) hh01611 (1731 aa) initn: 56 init1: 56 opt: 73 Z-score: 91.1 bits: 25.4 E(): 7.1 Smith-Waterman score: 73; 40.000% identity (53.333% similar) in 45 aa overlap (3-44:1215-1257) 10 20 30 FLJ003 NLPLHRRFTELWLPTAMSKSAVKISLDLLSNP ::: : ::: : . . :: ::.: KIAA14 EMQRVKGMTERHWEAVFTLQSQQRLLLIDSPLHNTFLELW--TMVHFLVPGISRPYLSSP 1190 1200 1210 1220 1230 1240 40 50 60 70 FLJ003 L---CEQDQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKK : :..:: . : KIAA14 LRAPSEESQDYYHKVVIRLHRVTQPFILRRTKRDVEKQLTKKYEHVLKCRLSNRQKALYE 1250 1260 1270 1280 1290 1300 >>KIAA1904 ( 821 res) af00058 (821 aa) initn: 95 init1: 64 opt: 69 Z-score: 90.5 bits: 24.2 E(): 7.7 Smith-Waterman score: 69; 30.508% identity (55.932% similar) in 59 aa overlap (2-60:133-191) 10 20 30 FLJ003 NLPLHRRFTELWLPTAMSKSAVKISLDLLSN : ... . :. :::.:. ::.:: :: KIAA19 QSSLQVLQLGYNKLSNLTEGMLRGMSRLQFLFVQHNLIEVVTPTAFSECPSLISIDLSSN 110 120 130 140 150 160 40 50 60 70 FLJ003 PLCEQDQDLLNMVTALDTAMKRMDAFNQEKVNQIQKTVIEPLKK : . : . ...: . . :: : KIAA19 RLSRLDGATFASLASLMVCELAGNPFNCECDLFGFLAWLVVFNNVTKNYDRLQCESPREF 170 180 190 200 210 220 75 residues in 1 query sequences 2210919 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:02:02 2009 done: Fri Feb 27 11:02:02 2009 Total Scan time: 0.270 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]