# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh05377.fasta.huge -Q ../query/FLJ00147.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00147, 772 aa vs ./tmplib.10216 library 2210222 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.7328+/-0.00453; mu= 11.2720+/- 0.305 mean_var=121.8136+/-27.135, 0's: 0 Z-trim: 1 B-trim: 24 in 1/39 Lambda= 0.116205 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0458 ( 1552 res) ef01252 (1552) 125 33.0 0.34 KIAA1732 ( 1915 res) bg00050 (1915) 115 31.5 1.2 KIAA1476 ( 2142 res) fj04778s1 (2142) 111 30.8 2.1 KIAA1789 ( 477 res) fh23186 ( 477) 102 28.6 2.2 KIAA0513 ( 412 res) hf00293 ( 412) 98 27.9 3.2 KIAA1355 ( 1189 res) fj01564 (1189) 103 29.2 3.6 KIAA0470 ( 1472 res) hg01996 (1472) 104 29.5 3.7 KIAA0144 ( 983 res) ha03843 ( 983) 97 28.1 6.4 KIAA0157 ( 419 res) ha03221 ( 419) 92 26.9 6.5 KIAA0670 ( 1286 res) hk02359s1 (1286) 98 28.4 6.8 KIAA1451 ( 939 res) bg00289 ( 939) 96 27.9 7 KIAA0226 ( 973 res) fg02838 ( 973) 96 27.9 7.2 KIAA1261 ( 787 res) hh15855b ( 787) 94 27.5 7.8 KIAA0308 ( 2759 res) ee00163 (2759) 101 29.3 8 KIAA1899 ( 1032 res) fk06803s1 (1032) 94 27.6 9.4 KIAA0477 ( 1148 res) hh00492 (1148) 94 27.7 10 KIAA0390 ( 1312 res) hj00075 (1312) 92 27.4 14 KIAA1188 ( 339 res) hg02860a ( 339) 84 25.4 14 KIAA0783 ( 899 res) hk05408 ( 899) 88 26.6 17 KIAA0554 ( 674 res) hh00877 ( 674) 86 26.1 18 KIAA0930 ( 348 res) hh03471 ( 348) 82 25.1 18 KIAA0339 ( 1709 res) hg01304(revised) (1709) 91 27.4 19 KIAA0793 ( 1055 res) hk05692 (1055) 88 26.6 19 KIAA0358 ( 1584 res) hh00017 (1584) 90 27.2 20 KIAA1025 ( 1917 res) fg00971s1 (1917) 91 27.4 20 KIAA1127 ( 2144 res) bf00005 (2144) 91 27.5 22 KIAA0695 ( 781 res) hk04006s1 ( 781) 85 26.0 22 KIAA0277 ( 583 res) ha06833 ( 583) 83 25.5 23 KIAA1495 ( 502 res) fj08986 ( 502) 82 25.3 23 KIAA0187 ( 1285 res) ha02920 (1285) 87 26.6 24 KIAA0997 ( 646 res) hk08613 ( 646) 83 25.6 25 KIAA1162 ( 115 res) hj05107 ( 115) 73 23.1 25 KIAA0268 ( 1193 res) ha07061 (1193) 86 26.4 26 KIAA1977 ( 606 res) fh18284(revised) ( 606) 82 25.4 26 KIAA1998 ( 607 res) bf00063 ( 607) 82 25.4 26 KIAA0162 ( 1730 res) ha03982 (1730) 88 26.9 26 KIAA1434 ( 677 res) hh05877 ( 677) 82 25.4 28 KIAA0512 ( 710 res) hf00239 ( 710) 82 25.4 29 FLJ00420 ( 613 res) sj09535 ( 613) 81 25.2 30 KIAA1491 ( 757 res) fj08187 ( 757) 82 25.5 31 FLJ00141 ( 1326 res) sh04092 (1326) 85 26.2 31 KIAA0638 ( 1384 res) hj03347s1 (1384) 85 26.3 32 KIAA0691 ( 762 res) hk03735 ( 762) 81 25.3 34 KIAA1041 ( 642 res) fh02801 ( 642) 80 25.1 35 KIAA0912 ( 1300 res) hk03560(revised) (1300) 84 26.1 35 KIAA0163 ( 550 res) ha01059 ( 550) 79 24.8 35 KIAA0642 ( 1329 res) hh02837 (1329) 84 26.1 35 KIAA0831 ( 406 res) hj04502 ( 406) 77 24.3 36 KIAA1123 ( 1717 res) fh01458 (1717) 85 26.4 37 FLJ00324 ( 376 res) sj01157 ( 376) 76 24.1 38 >>KIAA0458 ( 1552 res) ef01252 (1552 aa) initn: 80 init1: 53 opt: 125 Z-score: 114.9 bits: 33.0 E(): 0.34 Smith-Waterman score: 125; 28.025% identity (62.420% similar) in 157 aa overlap (229-377:586-730) 200 210 220 230 240 250 FLJ001 YQMAFADSHLWKLLDRHANTIRLFVLLPEQSPVSYSKRTAYQK---AGGDSGNVDDDCER ::.. . :.. .. :.. :.: :. : KIAA04 HSMRTRRSRGSMSTLRSGRKKQPASPDGRTSPINEDIRSSGRNSPSAASTSSN-DSKAET 560 570 580 590 600 610 260 270 280 290 300 310 FLJ001 VKGPVGSLKSVEAILEESTEKLKSLSLQQQQ---DGDNGD--SSKSTETSDFENIESPLN :: ::.. . ::.. ::: . :... : ...: :::.:.:... .:: . KIAA04 VK------KSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKTQEISRPNSP-S 620 630 640 650 660 320 330 340 350 360 370 FLJ001 ERDSSASVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCN : .. .: :.: .... .:::.......:: : . . . ::: ::.... . KIAA04 EGEGESS-DSRSVNDE-GSSDPKDIDQDNRSTSPSIPSPQDNESDSD--SSAQQQMLQAQ 670 680 690 700 710 720 380 390 400 410 420 430 FLJ001 ADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMY : : KIAA04 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPH 730 740 750 760 770 780 >>KIAA1732 ( 1915 res) bg00050 (1915 aa) initn: 115 init1: 55 opt: 115 Z-score: 104.7 bits: 31.5 E(): 1.2 Smith-Waterman score: 115; 21.739% identity (52.174% similar) in 207 aa overlap (245-440:1241-1440) 220 230 240 250 260 270 FLJ001 HANTIRLFVLLPEQSPVSYSKRTAYQKAGGDSGNVDDDCERVKGPVGS--LKSVEAILEE ::. ..: ...: :. : ..: . : KIAA17 PSTKLSTEADTDTPKKLMFRRLKIISENSMDSA-ISDATSELEGKDGKEDLDQLENVPVE 1220 1230 1240 1250 1260 280 290 300 310 320 FLJ001 STEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSASVDNRE-----LEQHI :.:.: .: :: . : ...: . : .: ...: .. .: ::. : KIAA17 EEEELQSQQLLPQQLPE----CKVDSETNIEASKLPTSEPEADAEIELKESNGTKLEEPI 1270 1280 1290 1300 1310 1320 330 340 350 360 370 380 FLJ001 QTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQ----IPLANGLD . : :.::.. :::...:: . :. . :. .. : . . . :: . . KIAA17 NEETPS--QDEEEGVSDVESERSQEQPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTE 1330 1340 1350 1360 1370 1380 390 400 410 420 430 440 FLJ001 SHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSG ... :. : : . .: . . . . :.. ... . . . : .: : KIAA17 KENTTTERGRDAVGFRDQTPAPKTPNRSRERDPDKQTQNKEKRKRRSSLSPPSSAYERGT 1390 1400 1410 1420 1430 1440 450 460 470 480 490 500 FLJ001 EGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSD KIAA17 KRPDDRYDTPTSKKKVRIKDRNKLSTEERRKLFEQEVAQREAQKQQQQMQNLGMTSPLPY 1450 1460 1470 1480 1490 1500 >>KIAA1476 ( 2142 res) fj04778s1 (2142 aa) initn: 77 init1: 68 opt: 111 Z-score: 100.5 bits: 30.8 E(): 2.1 Smith-Waterman score: 120; 20.745% identity (56.383% similar) in 188 aa overlap (228-412:556-741) 200 210 220 230 240 250 FLJ001 DYQMAFADSHLWKLLDRHANTIRLFVLLPEQSPVSYSKRTAYQKAGGDSGNVDDDCERVK :.:: : .. : ... :... . :: KIAA14 KINENIAAASSTPFSSPVNLSTSGRRTPGNQTPVMPSASPILHSQGKEKA-VSNNVNPVK 530 540 550 560 570 580 260 270 280 290 300 310 FLJ001 GPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSAS : . .....:. ... ..... .: : .. : : :. :. .. ..: : KIAA14 TQHHS-HPAKSLVEQFRGTDSDIPSSKDSEDSNEDEEEDDEEEDEEDDEDDESDDSQSES 590 600 610 620 630 640 320 330 340 350 360 370 FLJ001 VDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVD---SDILSSSHSSDTLCNADNA .: : . . . . .. .....::::....... ... :.. : : : . : KIAA14 DSNSESDTEGSEEEDDDDKDQDESDSDTEGEKTSMKLNKTTSSVKSPSMSLTGHSTPRNL 650 660 670 680 690 700 380 390 400 410 420 430 FLJ001 QIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAE .: : : .. : .. : : . . :. ::: KIAA14 HIAKAPGSAPAALCSESQSPAFLGTSSSTLTSSPHSGTSKRRRVTDERELRIPLEYGWQR 710 720 730 740 750 760 440 450 460 470 480 490 FLJ001 PYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRL KIAA14 ETRIRNFGGRLQGEVAYYAPCGKKLRQYPEVIKGMQWCLLKEEDVIPRIRAMEGRRGRPP 770 780 790 800 810 820 >>KIAA1789 ( 477 res) fh23186 (477 aa) initn: 67 init1: 43 opt: 102 Z-score: 100.2 bits: 28.6 E(): 2.2 Smith-Waterman score: 102; 23.377% identity (58.442% similar) in 154 aa overlap (275-419:333-473) 250 260 270 280 290 300 FLJ001 DSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFEN :: :::.::. :...: :.:. ... KIAA17 NQLPHCLPAHDSKQRLDSISYCQLTRDCFPEKPVPLSLNQQE---NNSGSYSVESEVYKH 310 320 330 340 350 310 320 330 340 350 FLJ001 IESPLNERDSSAS--VDNRELEQHIQTSD--PENFQSEERS-----DSDVNNDRSTSSVD . : : : .:. ... ..:.. . ::. ::... :.:...:.: KIAA17 LSSENNTADHQAGHKRKHQKRKRHLEEGKERPEKEQSKHKRKKSYEDTDLDKDKS----- 360 370 380 390 400 410 360 370 380 390 400 410 FLJ001 SDILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSE : . .. : . ....... . ::.. : .. . . .:: ..:: . . KIAA17 --IRQRKREEDRV-KVSSGKLKHRKKKKSHDVPSEKEERKH--RKEKKKSVEERTEEEML 420 430 440 450 460 420 430 440 450 460 470 FLJ001 YDESGKSRGEMQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSS .::: KIAA17 WDESILGF 470 >>KIAA0513 ( 412 res) hf00293 (412 aa) initn: 119 init1: 59 opt: 98 Z-score: 97.3 bits: 27.9 E(): 3.2 Smith-Waterman score: 98; 28.235% identity (56.471% similar) in 85 aa overlap (259-343:8-87) 230 240 250 260 270 280 FLJ001 SPVSYSKRTAYQKAGGDSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDG ::::: . :. . :. :: KIAA05 AMETPEVPVGSLIDFGPEAPTSSPLEAPPPVLQDGDG 10 20 30 290 300 310 320 330 340 FLJ001 DNGDSSKSTETSDFENIESPLNERDSSASVDNRELEQHIQTSDPENFQSEERSDSDVNND . ::... .::.. . :. ..: : : : : ..:. :.:.:.. ..: KIAA05 SLGDGASESETTESADSENDMGESPSHPSWD-----QDRRSSSNESFSSNQSTESTQDEE 40 50 60 70 80 90 350 360 370 380 390 400 FLJ001 RSTSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEE KIAA05 TLALRDFMRGYVEKIFSGGEDLDQEEKAKFGEYCSSENGKGREWFARYVSAQRCNSKCVS 100 110 120 130 140 150 >>KIAA1355 ( 1189 res) fj01564 (1189 aa) initn: 81 init1: 49 opt: 103 Z-score: 96.3 bits: 29.2 E(): 3.6 Smith-Waterman score: 103; 30.137% identity (57.534% similar) in 73 aa overlap (537-609:72-142) 510 520 530 540 550 560 FLJ001 ITIRLGRALKKGEYRVKVYQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELIPQLREQCGL ::: . :. . . . ..: : : KIAA13 RAGESVVLGCDLLPPAGRPPLHVIEWLRFGFLLPIFIQFGLYSPRIDPDYVGRVRLQKGA 50 60 70 80 90 100 570 580 590 600 610 620 FLJ001 ELSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMKSMSQLAVLS :.:. .:.. . : . . ::: :: :.:. ...: : : : KIAA13 SLQIEGLRVEDQGWYECRVFFLDQHIPEDDFA-NGSW-VHLTVNSPPQFQETPPAVLEVQ 110 120 130 140 150 630 640 650 660 670 680 FLJ001 RRWKPSEMKLDPFQEVVLESSSVDELREKLSEISGIPLDDIEFAKGRGTFPCDISVLDIH KIAA13 ELEPVTLRCVARGSPLPHVTWKLRGKDLGQGQGQVQVQNGTLRIRRVERGSSGVYTCQAS 160 170 180 190 200 210 >>KIAA0470 ( 1472 res) hg01996 (1472 aa) initn: 118 init1: 55 opt: 104 Z-score: 96.1 bits: 29.5 E(): 3.7 Smith-Waterman score: 104; 25.116% identity (60.000% similar) in 215 aa overlap (192-399:791-991) 170 180 190 200 210 220 FLJ001 ERCYNDLRLLSVSSKTLKAEGFFRSNKVFVESSETLDYQMAFADSHLWKLLDRHANTIRL : ::.:: . .. :. : : : .: : KIAA04 NIPIELIPHINKQTSSTPSSLALTSASRIRERSESLDPDSSM-DTTLI-LKDTEAVMAFL 770 780 790 800 810 230 240 250 260 270 280 FLJ001 FVLLPEQSPVSYSKRT-AYQKAGGDSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSL . : :.. .. . : .:.. .. : . : : . . :: . :. ..::.: ::. KIAA04 EAKLREDNKTDEGPDTPSYNRDNSISPESDVD----TASTISLVTGET-ERKSTQKRKSF 820 830 840 850 860 870 290 300 310 320 330 FLJ001 SLQQQQDGDNG----DSSKSTETSDFENIESPLNER--DSSASVDNRELEQHIQTSDPEN . .. ..: : .::. .. :..:. . : : .. .:.:.. .:.: KIAA04 TSLYKDRCSTGSPSKDVTKSSSSGAREKMEKKTKSRSTDVGSRADGRKF---VQSSGRIR 880 890 900 910 920 930 340 350 360 370 380 390 FLJ001 FQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTK : . .:.: ... :.. :::.::.. . . :. ... ::... : : .. . .: KIAA04 QPSVDLTDDDQTSSVPHSAI-SDIMSSDQETYS-CKP-HGRTPLTSA-DEHVHSKLEGSK 940 950 960 970 980 400 410 420 430 440 450 FLJ001 ANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSGEGHKWLMVHVD ....: KIAA04 VTKSKTSPVVSGSSSKSTTLPRPRPTRTSLLRRARLGEASDSELADADKASVASEVSTTS 990 1000 1010 1020 1030 1040 >>KIAA0144 ( 983 res) ha03843 (983 aa) initn: 87 init1: 55 opt: 97 Z-score: 91.9 bits: 28.1 E(): 6.4 Smith-Waterman score: 97; 26.613% identity (58.871% similar) in 124 aa overlap (273-396:622-741) 250 260 270 280 290 300 FLJ001 GGDSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDF :. . .:. :. .: .:.. :: .. . KIAA01 YEQRSTQTRRYPSSISSSPQKDLTQAKNGFSSVQATQLQTTQSVEGATGSAVKS-DSPST 600 610 620 630 640 650 310 320 330 340 350 360 FLJ001 ENIESPLNERDSSASVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSS .: :::: :.::. . .:: .. . .::: .. ... :: :.... :::: KIAA01 SSIP-PLNETVSAASLLTTT-NQHSSSLGGLS-HSEEIPNTTTTQHSSTLSTQQNTLSSS 660 670 680 690 700 370 380 390 400 410 420 FLJ001 HSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKS :: .. . . . . :: .:. : .. KIAA01 TSSGRTSTSTLLHTSVESEANLHSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLG 710 720 730 740 750 760 430 440 450 460 470 480 FLJ001 RGEMQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRV KIAA01 SNSTVTASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQ 770 780 790 800 810 820 >>KIAA0157 ( 419 res) ha03221 (419 aa) initn: 69 init1: 69 opt: 92 Z-score: 91.8 bits: 26.9 E(): 6.5 Smith-Waterman score: 92; 33.333% identity (64.706% similar) in 51 aa overlap (291-339:370-418) 270 280 290 300 310 FLJ001 GSLKSVEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDS--SASV :::..... ::.::. .: . .: : : KIAA01 AVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGEDSDDSDYENLIDPTEPSNSEYSHSK 340 350 360 370 380 390 320 330 340 350 360 370 FLJ001 DNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQIPL :.: . . ::.: :. . KIAA01 DSRPMAH--PDEDPRNTQTSQI 400 410 >>KIAA0670 ( 1286 res) hk02359s1 (1286 aa) initn: 73 init1: 73 opt: 98 Z-score: 91.4 bits: 28.4 E(): 6.8 Smith-Waterman score: 98; 23.404% identity (53.191% similar) in 188 aa overlap (260-434:72-252) 230 240 250 260 270 280 FLJ001 PVSYSKRTAYQKAGGDSGNVDDDCERVKGPVGSLKSVEAILEESTEKLKSLSLQQQQDGD .: : ...... :: . : :.:. . . KIAA06 ALVKRLKGALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKHYLEKQQEL-LRQRLERE 50 60 70 80 90 100 290 300 310 320 330 340 FLJ001 NGDSSK----STETSDF----ENIESPLNERDSSASVDNRELEQHIQTSDPENFQSEERS .... :.:. : :.. : : : ..:.. ::: .. . :::.. KIAA06 AREAAELEEASAESEDEMIHPEGVASLLPP-DFQSSLERPELELSRHSPRKSSSISEEKG 110 120 130 140 150 350 360 370 380 390 FLJ001 DSDVNNDRSTSSVDSDILSS-----SHSSDTLCNADNAQIPLANGLDSHSITSSRRTKAN ::: .. :. .: . .. :..:. . .. . : : . ..: :.. KIAA06 DSDDEKPRKGERRSSRVRQARAAKLSEGSQPAEEEEDQETPSRN----LRVRADRNLKTE 160 170 180 190 200 210 400 410 420 430 440 450 FLJ001 EGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSGEGHKWLMVHVDKR : ..: . :.: ... ::. ::: :: : KIAA06 EEEEEEEEEEEDDEEEEGD-DEGQKSREAPILKEFKEEGEEIPRVKPEEMMDERPKTRSQ 220 230 240 250 260 270 460 470 480 490 500 510 FLJ001 ITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALK KIAA06 EQEVLERGGRFTRSQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKEKSKSPSP 280 290 300 310 320 330 772 residues in 1 query sequences 2210222 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:42:02 2009 done: Fri Feb 27 10:42:02 2009 Total Scan time: 0.720 Total Display time: 0.180 Function used was FASTA [version 34.26.5 April 26, 2007]