# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh04864.fasta.huge -Q ../query/FLJ00144.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00144, 255 aa
vs ./tmplib.10216 library
2210739 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 4.4858+/-0.00357; mu= 12.2937+/- 0.241
mean_var=71.5383+/-15.361, 0's: 0 Z-trim: 0 B-trim: 4 in 1/39
Lambda= 0.151637
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA2019 ( 2797 res) ha06118 (2797) 93 30.1 1.5
KIAA1367 ( 579 res) fj03001 ( 579) 85 27.7 1.7
KIAA1686 ( 1175 res) fh25862s1 (1175) 86 28.2 2.4
FLJ00203 ( 1154 res) sj04233s1 (1154) 85 28.0 2.7
KIAA1064 ( 1315 res) hj05008s1 (1315) 83 27.6 4
KIAA1013 ( 1062 res) hj06791(revised) (1062) 82 27.3 4.1
KIAA1139 ( 1124 res) hk00330 (1124) 82 27.3 4.2
KIAA1565 ( 1313 res) bf00184 (1313) 82 27.4 4.7
KIAA1858 ( 2469 res) ae00147 (2469) 84 28.1 5.3
KIAA1252 ( 580 res) hh09572 ( 580) 77 25.9 5.7
KIAA1410 ( 4293 res) pg00933y4 (4293) 85 28.6 6.6
KIAA0103 ( 299 res) ha00802 ( 299) 73 24.7 6.7
KIAA1500 ( 2240 res) hh12031s1 (2240) 82 27.6 6.7
KIAA0441 ( 702 res) hh00601s1 ( 702) 76 25.8 7.6
KIAA0567 ( 978 res) hh02110 ( 978) 77 26.2 8.2
FLJ00101 ( 294 res) as00101 ( 294) 71 24.3 9
KIAA0097 ( 2038 res) ha00943(revised) (2038) 79 26.9 9.9
KIAA0211 ( 1317 res) ha02768 (1317) 77 26.3 10
KIAA1362 ( 699 res) fj02381 ( 699) 74 25.3 10
FLJ00011 ( 394 res) as00011 ( 394) 71 24.4 11
FLJ00087 ( 674 res) as00087 ( 674) 73 25.1 12
KIAA0472 ( 365 res) hh00171 ( 365) 70 24.2 12
FLJ00412 ( 749 res) sf00011 ( 749) 73 25.2 13
KIAA0574 ( 405 res) hj00204 ( 405) 70 24.2 13
FLJ00297 ( 141 res) sh04004 ( 141) 65 22.6 14
FLJ00145 ( 1731 res) sh04908 (1731) 76 26.2 14
KIAA1957 ( 481 res) fk12643 ( 481) 70 24.3 15
KIAA0466 ( 1214 res) pg00625 (1214) 74 25.6 15
KIAA1516 ( 2304 res) fh10631s2 (2304) 76 26.3 17
KIAA1016 ( 793 res) hk03719s1 ( 793) 71 24.8 18
KIAA0636 ( 540 res) hj03289 ( 540) 69 24.1 18
KIAA1403 ( 1337 res) fg02666s1 (1337) 73 25.4 19
KIAA0506 ( 78 res) hh00087 ( 78) 60 21.3 19
KIAA0315 ( 1841 res) hg00246 (1841) 74 25.8 20
KIAA1294 ( 1051 res) fg01155 (1051) 71 24.9 21
KIAA1627 ( 468 res) hh13711s1 ( 468) 67 23.6 23
KIAA1843 ( 1778 res) bf02364 (1778) 72 25.3 26
KIAA1670 ( 598 res) hh04251 ( 598) 67 23.7 27
KIAA0152 ( 315 res) ha03561 ( 315) 64 22.8 27
KIAA0224 ( 1256 res) ha04657 (1256) 70 24.7 28
KIAA1115 ( 895 res) hk05464 ( 895) 68 24.1 30
KIAA1053 ( 508 res) hh05049 ( 508) 65 23.2 32
KIAA1455 ( 2450 res) ef02451 (2450) 72 25.5 32
KIAA0157 ( 419 res) ha03221 ( 419) 64 22.9 33
KIAA1263 ( 850 res) hj00608 ( 850) 67 23.9 34
KIAA1815 ( 881 res) ha00534 ( 881) 67 23.9 34
KIAA0667 ( 1111 res) hk02319 (1111) 68 24.2 35
KIAA0987 ( 1115 res) hk01713 (1115) 68 24.3 35
KIAA1841 ( 523 res) fj20412(revised) ( 523) 64 23.0 38
KIAA0672 ( 824 res) hk02382 ( 824) 66 23.7 38
>>KIAA2019 ( 2797 res) ha06118 (2797 aa)
initn: 129 init1: 50 opt: 93 Z-score: 103.3 bits: 30.1 E(): 1.5
Smith-Waterman score: 93; 24.742% identity (52.577% similar) in 97 aa overlap (135-229:2521-2617)
110 120 130 140 150 160
FLJ001 VESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYP
:: :. .::.. . ::.. .
KIAA20 DLSVPRTFSTQIVRESEIPTSEIQTPSYGFSLLKVKIPEPHTQARVYTTMTQHSRTQEGT
2500 2510 2520 2530 2540 2550
170 180 190 200 210 220
FLJ001 EVGDLRVSFSYAGLSGD-DPDLG-PAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFS
: . .... . ..::: .:: : : .... . :.: . : . :: : .
KIAA20 EEAPIQATPGVDSISGDLQPDTGEPFEMISSSVNVLGQQTLTFEVPSGHQLADSCSDEEP
2560 2570 2580 2590 2600 2610
230 240 250
FLJ001 AEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS
::. :
KIAA20 AEILEFPPDDSQEATTPLADEGRAPKDKPESKKSGLLWFWLPNIGFSSSVDETGVDSKND
2620 2630 2640 2650 2660 2670
>>KIAA1367 ( 579 res) fj03001 (579 aa)
initn: 64 init1: 64 opt: 85 Z-score: 102.2 bits: 27.7 E(): 1.7
Smith-Waterman score: 89; 19.685% identity (49.213% similar) in 254 aa overlap (12-242:146-388)
10 20 30 40
FLJ001 VVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLP
:.: :.. ...: : : . ..
KIAA13 RVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLID-NPSEKIT
120 130 140 150 160 170
50 60 70 80 90 100
FLJ001 AVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHNNPS
..::..:.. : .: .:: : ..:::. . . ...: .: . : : ..::
KIAA13 EIELRKRVKL----EGKELEEYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPS
180 190 200 210 220 230
110 120 130 140 150 160
FLJ001 AMAVE-SFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSEN
: .. .. . . : :: .. . : . : . .::. ::.
KIAA13 AHKTKHDLMMKGEGSRKGSFFKQAK--KSYPMFPAPEERIKWDEYGEIIKPEDFLV----
240 250 260 270 280
170 180 190 200
FLJ001 PKYPEVGDLRVSFSYAGLSGDDP---DLG--PAHVVTVI---------------ARQRGD
:. . . . .. . .::.: ::. :.. ... .:. ::
KIAA13 PELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDYEGRSDGD
290 300 310 320 330 340
210 220 230 240 250
FLJ001 QLVPFSTKSGDTLLLLHHG--DFSAEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS
.. . .. :.. :: . : ... ..:: ..:
KIAA13 SIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDATSETHIYQ
350 360 370 380 390 400
KIAA13 VRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAP
410 420 430 440 450 460
>>KIAA1686 ( 1175 res) fh25862s1 (1175 aa)
initn: 85 init1: 62 opt: 86 Z-score: 99.7 bits: 28.2 E(): 2.4
Smith-Waterman score: 86; 26.437% identity (58.621% similar) in 87 aa overlap (75-160:100-182)
50 60 70 80 90 100
FLJ001 LRRHVEMYQWVETEESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGH-NNPSAM
. : . . . . .. .: :. :. : .
KIAA16 EGARYYINHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNY
70 80 90 100 110 120
110 120 130 140 150 160
FLJ001 AVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKY
: : :. :. .:: .: :: :: . : : ..:.. ..::: ..:....
KIAA16 NVTSDYAVHPMSPVGR---TSRASKKVHNFGKRSNSIKRNPNAPVVRRG-WLYKQDSTGM
130 140 150 160 170 180
170 180 190 200 210 220
FLJ001 PEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSA
KIAA16 KLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMR
190 200 210 220 230 240
>>FLJ00203 ( 1154 res) sj04233s1 (1154 aa)
initn: 51 init1: 51 opt: 85 Z-score: 98.6 bits: 28.0 E(): 2.7
Smith-Waterman score: 85; 27.517% identity (51.007% similar) in 149 aa overlap (54-195:696-834)
30 40 50 60 70 80
FLJ001 ALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESR-EYTEDGQVKKETRYSYNTEWR
:. . : :. . .:... : :
FLJ002 GQGPRAEAMMRSSIERGKWVFFQNCHLAPSWMPALERLIEHINPDKVHRDFRL-----WL
670 680 690 700 710 720
90 100 110 120 130
FLJ001 SEIINSKNFDREIGHNNPSAMAVESFTAT-----APFVQIGRFFLSSGLIDKVDNFKSLS
. . ..: : : .:. : :..: .. . ..:. ::.: :: .::::
FLJ002 TSLPSNK-FPVSILQNG-SKMTIEPPRGVRANLLKSYSSLGEDFLNS--CHKVMEFKSLL
730 740 750 760 770
140 150 160 170 180 190
FLJ001 LSKLEDPHVDIIRRGDFFYHSENPKYPEV-GDLRVSFSYAGLSGDDPDLGPAHVVTVIAR
:: : : . ..: : . : : . ::::. .: . :. : : .:. :
FLJ002 LS-LCLFHGNALERRKFGPLGFNIPYEFTDGDLRICISQLKMFLDEYDDIPYKVLKYTAG
780 790 800 810 820 830
200 210 220 230 240 250
FLJ001 QRGDQLVPFSTKSGDTLLLLHHGDFSAEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS
FLJ002 EINYGGRVTDDWDRRCIMNILEDFYNPDVLSPEHSYSASGIYHQIPPTYDLHGYLSYIKS
840 850 860 870 880 890
>>KIAA1064 ( 1315 res) hj05008s1 (1315 aa)
initn: 59 init1: 37 opt: 83 Z-score: 95.5 bits: 27.6 E(): 4
Smith-Waterman score: 83; 23.404% identity (56.028% similar) in 141 aa overlap (34-168:766-896)
10 20 30 40 50
FLJ001 PDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGV--HLPAVK--LRRHVEMYQWVETEE
:. :: ::... : .... : : :.
KIAA10 LPGEPGEHLFPEHPLEPDSFSEGGPPGRPKPGAGVPDFLPSAQRALYLRIQQKQQEEEER
740 750 760 770 780 790
60 70 80 90 100 110
FLJ001 SREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHNNPSAM--AVESFTATAPFVQI
.:. .:... .:.. . . .: : :.. : .. ... .... :.. : ...
KIAA10 ARRLAESSKQDRENEEGDTGNWYSS-------DEDEGGSSVTSILKTLRQQTSSRPPASV
800 810 820 830 840
120 130 140 150 160 170
FLJ001 GRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYAG
:.. :::: : . . :.: ::... : . : : ::
KIAA10 GELS-SSGLGDPRLQKGHPTGSRLADPRLS--RDPRLTRHVEASGGSGPGDSGPSDPRLA
850 860 870 880 890 900
180 190 200 210 220 230
FLJ001 LSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSAEVSAVPYSYGGGTS
KIAA10 RALPTSKPEGSLHSSPVGPSSSKGSGPPPTEEEEGERALREKAVNIPLDPLPGHPLRDPR
910 920 930 940 950 960
>>KIAA1013 ( 1062 res) hj06791(revised) (1062 aa)
initn: 79 init1: 57 opt: 82 Z-score: 95.5 bits: 27.3 E(): 4.1
Smith-Waterman score: 82; 23.232% identity (58.586% similar) in 99 aa overlap (34-130:281-374)
10 20 30 40 50 60
FLJ001 PDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESREY
:.:::: ::: .. . . . . .:
KIAA10 EDRVIEHYLKIKGLTRGQAVVQYMKIVEALPTYGVHYYAVKDKQGLPWWLGISYKGIGQY
260 270 280 290 300 310
70 80 90 100 110 120
FLJ001 TEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHNNPSAMAV--ESFTATAPFVQIGRFF
. .:: . .... . .. . :.: :. ..: ..: ..: .. ::: ..
KIAA10 DIQDKVKPRKLFQWK-QLENLYFREKKFAVEV--HDPRRISVSRRTFGQSGLFVQT--WY
320 330 340 350 360
130 140 150 160 170 180
FLJ001 LSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYAGLSGD
.:.:: ..
KIAA10 ANSSLIKSIWVMAISQHQFYLDRKQSKAKIPSARSLDEIAMDLTETGTQRASKLVTLEAK
370 380 390 400 410 420
>>KIAA1139 ( 1124 res) hk00330 (1124 aa)
initn: 39 init1: 39 opt: 82 Z-score: 95.2 bits: 27.3 E(): 4.2
Smith-Waterman score: 82; 24.855% identity (56.647% similar) in 173 aa overlap (33-199:108-272)
10 20 30 40 50
FLJ001 SPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYG--VHLPAVKLRRHVEMYQWVET--E
:::: .:: : . .:.: . : ... :
KIAA11 CEFGRLKVAQLLLNSHLCVALLEGEAKDPCDPNYTTPLHLAAKNGHREV-IRQLLRAGIE
80 90 100 110 120 130
60 70 80 90 100 110
FLJ001 ESREYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHN-NPSAM-AVESFTATAPFVQ
.:. :. : . .:. .:: .... . : .: .. : .:. :..::.. .
KIAA11 INRQ-TKTGTALHEAALYGKTEVVRLLLEG-GVDVNIRNTYNQTALDIVNQFTTSQASRE
140 150 160 170 180 190
120 130 140 150 160 170
FLJ001 IGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYA
: ... .. : :: .:.. .:.:: . .: :: . : ..:. : . . .
KIAA11 IKQLLREASGILKVRALKDF--WNLHDPTALNVRAGDVITVLE--QHPD-GRWKGHIHES
200 210 220 230 240
180 190 200 210 220 230
FLJ001 GLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSAEVSAVPYSYGGGT
. : : .: :.... :
KIAA11 QRGTDRIGYFPPGIVEVVSKRVGIPAARLPSAPTPLRPGFSRTPQPPAEEPPHPLTYSQL
250 260 270 280 290 300
>>KIAA1565 ( 1313 res) bf00184 (1313 aa)
initn: 73 init1: 73 opt: 82 Z-score: 94.3 bits: 27.4 E(): 4.7
Smith-Waterman score: 82; 33.333% identity (74.359% similar) in 39 aa overlap (127-165:428-466)
100 110 120 130 140 150
FLJ001 HNNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFY
.::....::: :...: :. : ::...
KIAA15 AALASFKAEIRHLLERVDQVVREKEKLRSDLDKAEKLKSLMASEVDDHHAAIERRNEYNL
400 410 420 430 440 450
160 170 180 190 200 210
FLJ001 HSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLL
.. . .: :
KIAA15 RKLDEEYKERIAALKNELRKEREQILQQAGKQRLELEQEIEKAKTEENYIRDRLALSLKE
460 470 480 490 500 510
>>KIAA1858 ( 2469 res) ae00147 (2469 aa)
initn: 92 init1: 69 opt: 84 Z-score: 93.3 bits: 28.1 E(): 5.3
Smith-Waterman score: 84; 35.714% identity (51.786% similar) in 56 aa overlap (182-237:953-1004)
160 170 180 190 200 210
FLJ001 GDFFYHSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGD
:: ::: . :.:: . : ::..:.
KIAA18 RTTAPSSTASDFQSDSPQSHRNASHQTPQGDP-LGPQDLKQ---RSRGYKKKPASTENGQ
930 940 950 960 970
220 230 240 250
FLJ001 TLLLLHHGDFSAEVSAVPYSYGGGTSMSFLPSSGYLIRSHYQGS
:: . :: :. . : : :
KIAA18 WKGQAPHGPVTCEVCAASFRSGPGLSRHKARKHRPHPGAPAEPSPAALPAQQPLEPLAQK
980 990 1000 1010 1020 1030
>>KIAA1252 ( 580 res) hh09572 (580 aa)
initn: 51 init1: 51 opt: 77 Z-score: 92.8 bits: 25.9 E(): 5.7
Smith-Waterman score: 77; 27.731% identity (52.101% similar) in 119 aa overlap (125-237:305-413)
100 110 120 130 140 150
FLJ001 IGHNNPSAMAVESFTATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDP-HVDIIRRGD
:.:: : . .:.. : . : ::: :
KIAA12 KMMEVDVRAMRRAISRNTAMLVCSTPQFPHGVIDPVPEVAKLAV-KYKIPLHVDACLGGF
280 290 300 310 320 330
160 170 180 190 200 210
FLJ001 FFYHSENPKYP--EVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGD
.. :. :: . :.::. . ...:.: : : .:..:: .: :.
KIAA12 LIVFMEKAGYPLEHPFDFRVK-GVTSISADTHKYGYA--------PKGSSLVLYSDKKYR
340 350 360 370 380
220 230 240 250
FLJ001 TLLLLHHGDFSAEVSAVPYSYG---GGTSMSFLPSSGYLIRSHYQGS
. .. :... . : : : :: :
KIAA12 NYQFFVDTDWQGGIYASPTIAGSRPGGISAACWAALMHFGENGYVEATKQIIKTARFLKS
390 400 410 420 430 440
255 residues in 1 query sequences
2210739 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:41:38 2009 done: Fri Feb 27 10:41:38 2009
Total Scan time: 0.410 Total Display time: 0.070
Function used was FASTA [version 34.26.5 April 26, 2007]