# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh03216.fasta.huge -Q ../query/FLJ00138.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00138, 309 aa vs ./tmplib.10216 library 2210685 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 6.0776+/-0.00464; mu= 9.0194+/- 0.311 mean_var=153.3418+/-35.048, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.103572 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1662 ( 1653 res) fj03879s1 (1653) 131 31.3 0.48 KIAA0845 ( 1034 res) hk05234s1 (1034) 120 29.4 1.1 KIAA1299 ( 730 res) fg04370 ( 730) 107 27.3 3.4 KIAA1869 ( 935 res) hh01800 ( 935) 106 27.3 4.4 KIAA0218 ( 777 res) ha02987 ( 777) 101 26.4 6.6 KIAA1014 ( 1050 res) hk02388s2 (1050) 101 26.6 8 KIAA1855 ( 1270 res) fg04654 (1270) 102 26.8 8.1 FLJ00243 ( 503 res) sj07676 ( 503) 95 25.3 9.4 KIAA1167 ( 834 res) hj01786(revised) ( 834) 97 25.8 10 FLJ00364 ( 601 res) sh04977 ( 601) 95 25.4 11 FLJ00146 ( 522 res) sh05065 ( 522) 93 25.0 12 KIAA0807 ( 1329 res) hk04449(revised) (1329) 98 26.2 13 KIAA1836 ( 718 res) fh12206(revised) ( 718) 94 25.3 13 KIAA1023 ( 666 res) fh15455 ( 666) 93 25.1 14 KIAA1805 ( 534 res) fk00014 ( 534) 91 24.7 15 KIAA1273 ( 606 res) hk09394 ( 606) 91 24.8 16 KIAA0555 ( 802 res) hh00882 ( 802) 92 25.1 17 KIAA1458 ( 612 res) fh16694 ( 612) 90 24.6 18 KIAA0979 ( 1483 res) hj07056s1 (1483) 95 25.9 19 KIAA1075 ( 1505 res) hj06716s1 (1505) 95 25.9 19 KIAA1076 ( 804 res) hj06779 ( 804) 91 24.9 19 KIAA0980 ( 1406 res) hj07083 (1406) 94 25.7 20 FLJ00372 ( 396 res) sh06918 ( 396) 86 23.8 21 KIAA0722 ( 1066 res) hk02030s1 (1066) 92 25.2 21 FLJ00101 ( 294 res) as00101 ( 294) 84 23.3 21 KIAA1286 ( 1214 res) hh11961(revised) (1214) 92 25.3 22 KIAA0095 ( 832 res) ha01471 ( 832) 89 24.6 24 KIAA1732 ( 1915 res) bg00050 (1915) 94 25.8 24 KIAA0242 ( 529 res) ha03111(revised) ( 529) 86 24.0 25 KIAA1281 ( 1534 res) hh04108s1 (1534) 92 25.4 26 KIAA0568 ( 1426 res) hh02280 (1426) 91 25.2 27 KIAA1741 ( 1777 res) fh23254 (1777) 92 25.5 28 KIAA1046 ( 427 res) hh00940 ( 427) 83 23.4 29 KIAA1292 ( 595 res) hk05468(revised) ( 595) 85 23.9 29 KIAA1898 ( 1013 res) fk06427 (1013) 88 24.6 30 KIAA1981 ( 862 res) fk03148(revised) ( 862) 87 24.4 30 KIAA1330 ( 945 res) fh15188 ( 945) 87 24.4 32 KIAA0682 ( 973 res) hk02879 ( 973) 87 24.4 32 KIAA0881 ( 1064 res) hk07534 (1064) 87 24.5 34 KIAA0654 ( 1267 res) fh18335 (1267) 88 24.7 34 KIAA1742 ( 1301 res) pj01304s1 (1301) 88 24.7 35 FLJ00007 ( 701 res) as00007 ( 701) 84 23.8 36 KIAA1086 ( 902 res) hj08218 ( 902) 85 24.1 38 KIAA1949 ( 662 res) fj02913 ( 662) 83 23.6 38 KIAA1400 ( 1093 res) hk08136 (1093) 86 24.3 39 KIAA0124 ( 682 res) ha01534 ( 682) 83 23.6 39 KIAA0418 ( 989 res) hh00988 ( 989) 85 24.1 40 KIAA1234 ( 727 res) fh08618 ( 727) 83 23.7 41 KIAA0497 ( 239 res) hg00150 ( 239) 76 22.0 42 KIAA0495 ( 209 res) hg00106 ( 209) 75 21.8 43 >>KIAA1662 ( 1653 res) fj03879s1 (1653 aa) initn: 76 init1: 53 opt: 131 Z-score: 112.1 bits: 31.3 E(): 0.48 Smith-Waterman score: 131; 27.488% identity (47.867% similar) in 211 aa overlap (26-225:588-779) 10 20 30 40 50 FLJ001 DKGKIIKQQETVIILEDYADPYDAKRTKGQRDAERV-GENDGYMEPYDAQQMITE :. :. ..::. :.. : : : : KIAA16 YTVLADLPPPRRLAQRQPGPQAQCSSGGRTRSPGRAEVERLFGQERRKSEAAGAFQAQDE 560 570 580 590 600 610 60 70 80 90 100 FLJ001 IRRRGSKDPLVKALQLLDSPCEPADGGLKSETLAK-----RRSSKDLLGKPPQLYDTPYE : :..: ::: :: . . :: :::. : ::. .: . KIAA16 GR---SQQPSQGQSQLLRRQSSPAPSRQVTMLPAKQAELTRRSQAD----PPH-PRSPEK 620 630 640 650 660 110 120 130 140 150 160 FLJ001 PAEGGPRAEGKARPP--DSRLPENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSFR :: . .:. :: ..: :: . : ..: : . . :.: ... :.: KIAA16 RPEGDRQLQGSPLPPRTSARTPERELRT----QRPLESGQAGPRQPLGV-WQSQEEPPGS 670 680 690 700 710 720 170 180 190 200 210 220 FLJ001 EETVRQHHRQKSWTQKILKPALSDHSEGEKVDPGLPLEKQP---WYHGAISRAEAESRLQ . : : ..::... . .:. . .:.: : : : :. :: :: : KIAA16 QGPHR--HLERSWSSQ--EGGLGPGGWWGCGEPSLGAAKAPEGAW--GGTSREYKESWGQ 730 740 750 760 770 230 240 250 260 270 280 FLJ001 PCKEAGYLVRNSESGNSRYSIALKTSQGCVHIIVAQTKDNKYTLNQTSAVFDSIPEVVHY : KIAA16 PEAWEEKPTHELPRELGKRSPLTSPPENWGGPAESSQSWHSGTPTAVGWGAEGACPYPRG 780 790 800 810 820 830 >>KIAA0845 ( 1034 res) hk05234s1 (1034 aa) initn: 98 init1: 47 opt: 120 Z-score: 105.6 bits: 29.4 E(): 1.1 Smith-Waterman score: 120; 22.593% identity (54.074% similar) in 270 aa overlap (1-262:450-703) 10 20 FLJ001 DKGKIIKQQET-VIILEDYADPYDAKRTKG .: :.....: ..:.:. .. .. . KIAA08 RIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVT 420 430 440 450 460 470 30 40 50 60 70 80 FLJ001 QRDAERVGENDGYMEPYDAQQMITEIRRRGSKDPLVKALQLLDSPCEPADGGLKSE--TL ... ... :..: : ... .: .. .:.: .. :: . : . .: : . KIAA08 EEEEKEAKEEEGK-EEEGGEEEEAEGGEEETKSPPAEEAA---SPEKEAKSPVKEEAKSP 480 490 500 510 520 530 90 100 110 120 130 140 FLJ001 AKRRSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARPPDSRLPENDE-RPAAEYEQPWEWK :. .: . .: : .: : :.. . :.:. ::... ::..: . :: ..: . : KIAA08 AEAKSPEKEEAKSPAEVKSP-EKAKSPAKEEAKS-PPEAKSPEKEEAKSPAEVKSPEKAK 540 550 560 570 580 590 150 160 170 180 190 200 FLJ001 ---KEQIVR-ALSVQFEGAERPSFREETVRQHHRQKSWTQKILKPALSDHSEGEKVDPGL ::. : . . : :. : .::. . .. .. .:: : : .: KIAA08 SPAKEEAKSPAEAKSPEKAKSP-VKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAK-SPTK 600 610 620 630 640 650 210 220 230 240 250 260 FLJ001 PLEKQPWYHGAISRAEAESRLQPCKEAGYLVRNSESGNSRYSIALKTSQGCVHIIVAQTK :.: . : : .:.: : :: . .. :...: . :. . . :..: KIAA08 EEAKSP--EKAKSPEKAKS---PEKEEA---KSPEKAKSPVKAEAKSPEKAKSPVKAEAK 660 670 680 690 700 270 280 290 300 FLJ001 DNKYTLNQTSAVFDSIPEVVHYYSNEKLPFKGAEHMTLLYPVHSKLH KIAA08 SPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEK 710 720 730 740 750 760 >>KIAA1299 ( 730 res) fg04370 (730 aa) initn: 110 init1: 75 opt: 107 Z-score: 96.8 bits: 27.3 E(): 3.4 Smith-Waterman score: 120; 21.233% identity (51.370% similar) in 292 aa overlap (37-306:409-686) 10 20 30 40 50 60 FLJ001 KQQETVIILEDYADPYDAKRTKGQRDAERVGENDGYMEPYDAQQM---ITEIRRRGSKDP : .. :: :::.. ...:.. : : KIAA12 SIPCSSITDVRTTTALEMPDRENTFVVKVEGPSEYIMETVDAQHVKAWVSDIQECLSPGP 380 390 400 410 420 430 70 80 90 100 110 FLJ001 L-VKALQLLDSPCEPADGGLKSET--------LAKRRS--SKDLLGKPPQLYDTPYEPAE . . . . : :. . : :. : . .: :.::: : . : . : KIAA12 CPATSPRPMTLPLAPGTSFLTRENTDSLELSCLNHSESLPSQDLLLGPSESNDRLSQGAY 440 450 460 470 480 490 120 130 140 150 160 170 FLJ001 GGPRAEGKARPPDSRLPENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSFREETVR :: . :: : : . :..... : .. . .. :: . . .. KIAA12 GGL----SDRPSASISPSSASIAASHFDS-MELLPPELPPRIPIE-EGPPTGTVHPLSAP 500 510 520 530 540 550 180 190 200 210 220 230 FLJ001 QH--HRQKSWTQKILKPALSDHSEGEKVDPGLPLEKQPWYHGAISRAEAESRLQPCKEAG .. : ..: . . .::.. :: ::.:: .:: .: ..: .: KIAA12 YPPLDTPETATGSFLFQGEPEGGEGDQ-----PLSGYPWFHGMLSRLKA-AQLVLTGGTG 560 570 580 590 600 240 250 260 270 280 FLJ001 ----YLVRNSESGNSRYSIALKTSQGCVHIIVAQTKDNKYTLNQTSAVFDSIPEVVHYYS .:::.::. ..: .... . :. .. ..... ... :.:: ...... KIAA12 SHGVFLVRQSETRRGEYVLTFNFQGKAKHLRLSLNEEGQCRVQHL--WFQSIFDMLEHFR 610 620 630 640 650 660 290 300 FLJ001 NEKLPFK--GAEHMTLLYPVHSKLH . .:.. :. ..:. : : KIAA12 VHPIPLESGGSSDVVLVSYVPSSQRQQGREQAGSHAGVCEGDGCHPDASCTLMPFGASDC 670 680 690 700 710 720 >>KIAA1869 ( 935 res) hh01800 (935 aa) initn: 151 init1: 103 opt: 106 Z-score: 94.7 bits: 27.3 E(): 4.4 Smith-Waterman score: 106; 38.889% identity (57.407% similar) in 54 aa overlap (99-149:680-730) 70 80 90 100 110 120 FLJ001 QLLDSPCEPADGGLKSETLAKRRSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARP-PDS- . :::: : : :: : : : :.: KIAA18 LPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPEGVPPPELACLPTPEST 650 660 670 680 690 700 130 140 150 160 170 180 FLJ001 -RLPENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSFREETVRQHHRQKSWTQKIL .:: . : :.. ::::.... KIAA18 PELPVKHLRAAGD---PWEWNQNRNNAKEGPGRSRGGHAAGGPAPRVLVRPPPPGCPGQA 710 720 730 740 750 760 >>KIAA0218 ( 777 res) ha02987 (777 aa) initn: 82 init1: 48 opt: 101 Z-score: 91.6 bits: 26.4 E(): 6.6 Smith-Waterman score: 101; 24.823% identity (49.645% similar) in 141 aa overlap (27-165:165-300) 10 20 30 40 50 FLJ001 DKGKIIKQQETVIILEDYADPYDAKRTKGQRDAERVGENDGYMEPYDAQQMITE-I :... :: :.:: :: .:. . . KIAA02 PANASLEEMASLEEEACSLKVDSKDSSHNSTNSEFAAEAEGQNDTIEEPNKVQKRKRDRL 140 150 160 170 180 190 60 70 80 90 100 110 FLJ001 RRRGSKDPLVKALQLLDSPCEPADGGLKSETLAKRRSSKD-LLGKPPQLYDTPYEPAEGG : .:: .::.: . . : : .. : :: ... :. : . : . :::. KIAA02 RDQGSTMIYLKAIQGILGKSMPKRKG-EAATRAKPSAAEHPSHGEGPARSEGPAKTAEGA 200 210 220 230 240 250 120 130 140 150 160 170 FLJ001 PRAEGKARPPDSRLPENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSFREETVRQH :. . . :.: : . .:. ... : .. :.:: KIAA02 ARSVTVT----AAQKEKDATPEVSMEEDKTVPERSSFYDRRVVIDPQEKPSEEPLGDRRT 260 270 280 290 300 180 190 200 210 220 230 FLJ001 HRQKSWTQKILKPALSDHSEGEKVDPGLPLEKQPWYHGAISRAEAESRLQPCKEAGYLVR KIAA02 VIDKCSPPLEFLDDSDSHLEIQKHKDREVVMEHPSSGSDWSDVEEISTVRFSQEEPVSLK 310 320 330 340 350 360 >>KIAA1014 ( 1050 res) hk02388s2 (1050 aa) initn: 51 init1: 51 opt: 101 Z-score: 90.1 bits: 26.6 E(): 8 Smith-Waterman score: 101; 26.144% identity (49.673% similar) in 153 aa overlap (55-204:3-142) 30 40 50 60 70 80 FLJ001 KRTKGQRDAERVGENDGYMEPYDAQQMITEIRRRGSKDPLVKALQLLDSPCEPADGGLKS : ::... : : .: : : .: . KIAA10 ILITRRSAQGP---APSLQCPPLSAARRSLLA 10 20 90 100 110 120 130 140 FLJ001 ETLAKRRSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARPPDSRLPENDERP---AAEYEQ :: ..:. . :. : : .: : :::. .: :. :: : .: :: : KIAA10 LGLAMGKKSRAVPGRRPILQLSP--P---GPRGSTPGRDPE---PEPDTEPDSTAAVPSQ 30 40 50 60 70 80 150 160 170 180 190 200 FLJ001 PWEWKKEQIVRALSVQFEGAERPSFREETVRQHHRQKSWTQKILKPALSDHSEGEKVDPG : . . :... . . :: .. . .. .:. ::... . . :. : KIAA10 PAP--SAATTTAVTAAAASDDSPSEGKDEQEAVQEVPRVVQNPPKPVMTTRPTAVKATGG 90 100 110 120 130 210 220 230 240 250 260 FLJ001 LPLEKQPWYHGAISRAEAESRLQPCKEAGYLVRNSESGNSRYSIALKTSQGCVHIIVAQT : : KIAA10 LCLLGAYADSDDDDNDVSEKLAQSKETNGNQSTDIDSTLANFLAEIDAITAPQPAAPVGA 140 150 160 170 180 190 >>KIAA1855 ( 1270 res) fg04654 (1270 aa) initn: 148 init1: 82 opt: 102 Z-score: 90.0 bits: 26.8 E(): 8.1 Smith-Waterman score: 102; 39.623% identity (60.377% similar) in 53 aa overlap (78-129:1055-1106) 50 60 70 80 90 100 FLJ001 AQQMITEIRRRGSKDPLVKALQLLDSPCEPADGGLKSETLAKRRSSKDLLGKPPQLYDTP :.:. .: . .::.:. : : . ::: KIAA18 KERWSKRARPQQDLARLVMEKRQGRLLLRLASGASSSSSEEQRRASETLSGTGSE-EDTP 1030 1040 1050 1060 1070 1080 110 120 130 140 150 160 FLJ001 Y-EPAEGGPRAEGKARPPDSRLPENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSF ::: . :: :.: ::.: KIAA18 ASEPAAALPRKSGRAAATRSRIPRPIGLRMPMPVAAQQPASRSHGAAPALDTAITSRLQL 1090 1100 1110 1120 1130 1140 >>FLJ00243 ( 503 res) sj07676 (503 aa) initn: 82 init1: 58 opt: 95 Z-score: 88.9 bits: 25.3 E(): 9.4 Smith-Waterman score: 95; 23.977% identity (46.199% similar) in 171 aa overlap (43-207:300-468) 20 30 40 50 60 70 FLJ001 IILEDYADPYDAKRTKGQRDAERVGENDGYMEPYDAQQMITEIRRRGSKDPLVKALQLLD . :: ..::.. : . : : :. FLJ002 RRQPPVSPLTLSPGPEANQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSFLPTEAQAQVSP 270 280 290 300 310 320 80 90 100 110 120 FLJ001 SPCEPADGGLKSETLAKRRSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARP---PDSRLP : :: : . : . :. . .: . : . : :.:.. :: . FLJ002 PPPYPAPQELTQPLLQQPRAPEAPAQQPQAASSLPQSDFQLLP-AQGSSLTNFFPDVGFD 330 340 350 360 370 380 130 140 150 160 170 180 FLJ001 ENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSFREETVRQHHRQKSWTQ--KILKP ... ::. . : . : : :. .:. : .. . : :. : :. FLJ002 QQSMRPGPAFPQQVPLVQ-QGSRELQDSFHLRPSPYSNCGSLPNTILPDSSTSLFKDLNS 390 400 410 420 430 440 190 200 210 220 230 240 FLJ001 ALSDHSE-GEKVDPGLPLEKQPWYHGAISRAEAESRLQPCKEAGYLVRNSESGNSRYSIA ::. : . .:: .:::.. FLJ002 ALAGLPEVSLNVDTPFPLEEELQIEPLSLDGLNMLSDSSMGLLDPSVEETFRADRL 450 460 470 480 490 500 >>KIAA1167 ( 834 res) hj01786(revised) (834 aa) initn: 48 init1: 48 opt: 97 Z-score: 88.0 bits: 25.8 E(): 10 Smith-Waterman score: 104; 23.729% identity (59.322% similar) in 177 aa overlap (117-278:162-335) 90 100 110 120 130 140 FLJ001 LAKRRSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARPPDSRLPEN-DERPAAEYEQPWEW .::.. :: . : : :: : :: KIAA11 RLQAENTALQKNVAALQERYGKEAGKFSAVSEGQGDPPGGPAPTVLAPMPLAEVELKWEM 140 150 160 170 180 190 150 160 170 180 190 FLJ001 KKEQIVRALSVQFEG------AERPSFREETVRQ----HHRQKSWTQ-KILKPALSDHSE .::. : : :..: :: ..:: .. ...:.:. . . : .: . :. KIAA11 EKEEK-RLLWEQLQGLESSKQAETSRLQEELAKLSEKLKKKQESFCRLQTEKETLFNDSR 200 210 220 230 240 250 200 210 220 230 240 250 FLJ001 GEKVDPGLPLEKQPWYHGAISRAEA-ESRLQPCKEAGYLVRNSESGNS-RYSIALKTSQG . :.. : .:. ... ..:.. ...:. ... .:....:. ... ::.. : KIAA11 N-KIEE-LQQRKEADHKAQLARTQKLQQELEAANQSLAELRDQRQGERLEHAAALRALQD 260 270 280 290 300 260 270 280 290 300 FLJ001 CVHIIVAQTKDN-KYTLNQTSAVFDSIPEVVHYYSNEKLPFKGAEHMTLLYPVHSKLH : : :..... . : ...:. :. KIAA11 QVSIQSADAQEQVEGLLAENNALRTSLAALEQIQTAKTQELNMLREQTTGLAAELQQQQA 310 320 330 340 350 360 >>FLJ00364 ( 601 res) sh04977 (601 aa) initn: 82 init1: 58 opt: 95 Z-score: 88.0 bits: 25.4 E(): 11 Smith-Waterman score: 95; 23.977% identity (46.199% similar) in 171 aa overlap (43-207:398-566) 20 30 40 50 60 70 FLJ001 IILEDYADPYDAKRTKGQRDAERVGENDGYMEPYDAQQMITEIRRRGSKDPLVKALQLLD . :: ..::.. : . : : :. FLJ003 RRQPPVSPLTLSPGPEAHQGFSRQLSSTSPLAPYPTSQMVSSDRSQLSFLPTEAQAQVSP 370 380 390 400 410 420 80 90 100 110 120 FLJ001 SPCEPADGGLKSETLAKRRSSKDLLGKPPQLYDTPYEPAEGGPRAEGKARP---PDSRLP : :: : . : . :. . .: . : . : :.:.. :: . FLJ003 PPPYPAPQELTQPLLQQPRAPEAPAQQPQAASSLPQSDFQLLP-AQGSSLTNFFPDVGFD 430 440 450 460 470 480 130 140 150 160 170 180 FLJ001 ENDERPAAEYEQPWEWKKEQIVRALSVQFEGAERPSFREETVRQHHRQKSWTQ--KILKP ... ::. . : . : : :. .:. : .. . : :. : :. FLJ003 QQSMRPGPAFPQQVPLVQ-QGSRELQDSFHLRPSPYSNCGSLPNTILPDSSTSLFKDLNS 490 500 510 520 530 540 190 200 210 220 230 240 FLJ001 ALSDHSE-GEKVDPGLPLEKQPWYHGAISRAEAESRLQPCKEAGYLVRNSESGNSRYSIA ::. : . .:: .:::.. FLJ003 ALAGLPEVSLNVDTPFPLEEELQIEPLSLDGLNMLSDSSMGLLDPSVEETFRTDRL 550 560 570 580 590 600 309 residues in 1 query sequences 2210685 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:40:39 2009 done: Fri Feb 27 10:40:39 2009 Total Scan time: 0.450 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]