# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh02579.fasta.huge -Q ../query/FLJ00288.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00288, 217 aa vs ./tmplib.10216 library 2210777 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.0235+/-0.00394; mu= 23.6186+/- 0.267 mean_var=85.1413+/-18.483, 0's: 0 Z-trim: 13 B-trim: 11 in 1/39 Lambda= 0.138997 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00006 ( 401 res) as00006 ( 401) 344 77.9 7.8e-16 KIAA1055 ( 868 res) hh09512 ( 868) 326 74.9 1.3e-14 KIAA0019 ( 838 res) ha00537 ( 838) 324 74.5 1.7e-14 KIAA0882 ( 1291 res) hk07544s1 (1291) 321 74.2 3.1e-14 KIAA1108 ( 763 res) hh03387s1 ( 763) 316 72.8 5e-14 KIAA0676 ( 1262 res) hk02596 (1262) 315 73.0 7.1e-14 KIAA0603 ( 1348 res) hg01488b (1348) 301 70.2 5.1e-13 FLJ00332 ( 201 res) sj03652 ( 201) 263 61.0 4.5e-11 KIAA1322 ( 702 res) fh13826 ( 702) 249 59.3 5.4e-10 KIAA0608 ( 775 res) hh00889b ( 775) 247 59.0 7.4e-10 KIAA0210 ( 801 res) ha02313 ( 801) 141 37.7 0.0019 KIAA1171 ( 595 res) hh05501s1 ( 595) 119 33.1 0.035 KIAA0984 ( 728 res) hj07670 ( 728) 116 32.6 0.058 KIAA1941 ( 1233 res) ah04470 (1233) 100 29.9 0.67 FLJ00104 ( 287 res) as00104 ( 287) 95 27.6 0.73 KIAA0397 ( 1016 res) fj00010 (1016) 95 28.7 1.2 FLJ00301 ( 140 res) sh04549 ( 140) 82 24.4 3.3 FLJ00067 ( 574 res) as00067 ( 574) 86 26.4 3.4 KIAA0830 ( 523 res) hj04436 ( 523) 83 25.7 5 KIAA1363 ( 430 res) fj02385 ( 430) 82 25.4 5.3 KIAA1545 ( 968 res) fj14026s1 ( 968) 78 25.2 13 KIAA1469 ( 662 res) fj01881 ( 662) 76 24.5 15 KIAA0351 ( 590 res) hg01609 ( 590) 75 24.2 16 KIAA0985 ( 697 res) hj08038 ( 697) 75 24.4 17 KIAA0963 ( 1391 res) hj05936 (1391) 77 25.4 17 KIAA0091 ( 1058 res) ha01032 (1058) 76 24.9 18 KIAA0355 ( 1082 res) hg01881 (1082) 76 24.9 18 KIAA0152 ( 315 res) ha03561 ( 315) 72 23.1 19 KIAA0447 ( 466 res) fh17910 ( 466) 73 23.6 19 FLJ00113 ( 419 res) as00113 ( 419) 72 23.3 21 FLJ00356 ( 851 res) sh02495 ( 851) 74 24.3 21 KIAA1355 ( 1189 res) fj01564 (1189) 75 24.8 21 KIAA1968 ( 860 res) fk04713 ( 860) 74 24.3 21 KIAA0770 ( 913 res) hk05040s1 ( 913) 74 24.4 22 KIAA1771 ( 1302 res) pj02581(revised) (1302) 75 24.9 22 KIAA1628 ( 980 res) fh14247(revised) ( 980) 74 24.5 23 KIAA1632 ( 1457 res) fh19068(revised) (1457) 75 25.0 23 KIAA0495 ( 209 res) hg00106 ( 209) 69 22.2 24 KIAA0987 ( 1115 res) hk01713 (1115) 74 24.6 24 KIAA1908 ( 445 res) ah02604 ( 445) 71 23.2 25 KIAA1332 ( 651 res) fh15405 ( 651) 72 23.7 25 KIAA1419 ( 2464 res) ff01653 (2464) 76 25.6 25 FLJ00389 ( 351 res) sj04583 ( 351) 70 22.8 26 FLJ00360 ( 137 res) sh04326 ( 137) 67 21.4 26 FLJ00281 ( 1495 res) sh01915 (1495) 74 24.8 27 KIAA0626 ( 433 res) hh00753 ( 433) 70 23.0 28 KIAA0841 ( 641 res) hk04975 ( 641) 71 23.5 29 FLJ00260 ( 922 res) sh05833 ( 922) 72 24.0 29 KIAA0720 ( 1091 res) hk01741s1 (1091) 72 24.1 31 KIAA1458 ( 612 res) fh16694 ( 612) 69 23.1 37 >>FLJ00006 ( 401 res) as00006 (401 aa) initn: 320 init1: 204 opt: 344 Z-score: 377.6 bits: 77.9 E(): 7.8e-16 Smith-Waterman score: 344; 38.514% identity (62.838% similar) in 148 aa overlap (15-161:103-250) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVL ::.:: : .: . :.: :. : : ::: FLJ000 GALQKKRNSELSYREIVKNSSNDETIAAKQIEKDLLRTMPSNACFASMGSIGVPRLRRVL 80 90 100 110 120 130 50 60 70 80 90 100 FLJ002 KAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPG-YYSEKLEAIQLDG .: . :: ::::. . .:: ::. . :.::: . : : ::. :.: : ..: : FLJ000 RALAWLYPEIGYCQGTGMVAACLLLFLEEEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQ 140 150 160 170 180 190 110 120 130 140 150 160 FLJ002 EILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGL ..: :. . : : :... :. : .::. ::. .. . .::.::.:: ::. FLJ000 RVLRHLIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLRIWDLFFYEGSRV 200 210 220 230 240 250 170 180 190 200 210 FLJ002 GLGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP FLJ000 LFQLTLGMLHLKEEELIQSENSASIFNTLSDIPSQMEDAELLLGVAMRLAGSLTDVAVET 260 270 280 290 300 310 >>KIAA1055 ( 868 res) hh09512 (868 aa) initn: 284 init1: 193 opt: 326 Z-score: 355.5 bits: 74.9 E(): 1.3e-14 Smith-Waterman score: 326; 34.014% identity (63.265% similar) in 147 aa overlap (15-160:664-810) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVL :: :: : .: .. . ..: : : :: KIAA10 TRKFKDNTEPGHFQTLLQKALEKQNPASKQIELDLLRTLPNNKHYSCPTSEGIQKLRNVL 640 650 660 670 680 690 50 60 70 80 90 100 FLJ002 KAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLP-GYYSEKLEAIQLDG :.. :. ::::. ..:: :... :.:::::: : : ..: ::.. : . :.: KIAA10 LAFSWRNPDIGYCQGLNRLVAVALLYLEQEDAFWCLVTIVEVFMPRDYYTKTLLGSQVDQ 700 710 720 730 740 750 110 120 130 140 150 160 FLJ002 EILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGL ... .:... : : :. . :.: : .::. .: .. . ....:: :. :: KIAA10 RVFRDLMSEKLPRLHGHFEQYKVDYTLITFNWFLVVFVDSVVSDILFKIWDSFLYEGPKV 760 770 780 790 800 810 170 180 190 200 210 FLJ002 GLGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP KIAA10 IFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARSGTDAPTTWRKSGWS 820 830 840 850 860 >>KIAA0019 ( 838 res) ha00537 (838 aa) initn: 297 init1: 197 opt: 324 Z-score: 353.5 bits: 74.5 E(): 1.7e-14 Smith-Waterman score: 324; 36.875% identity (65.000% similar) in 160 aa overlap (5-160:148-302) 10 20 30 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGG :: : . .:. :..: : : :: .: : KIAA00 EVWALLLEIPKMKEETRDLYSKLKHRARGCSP-DIRQIDL---DVNRTFRDHIMFRDRYG 120 130 140 150 160 170 40 50 60 70 80 90 FLJ002 HGQQDLFRVLKAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQIC---EKYLPGY ::.::.:: ::..: : ::::... :.:.:::.: :.::: ::.. .. . :. KIAA00 VKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKHAMHGF 180 190 200 210 220 230 100 110 120 130 140 150 FLJ002 YSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFM-CAFSRTLPWSSVL . . . . : ..:.: ..::. :.: .: .::. : ..:: :.. : KIAA00 FVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRT-PFTLNL 240 250 260 270 280 290 160 170 180 190 200 210 FLJ002 RVWDMFFCEGTGLGLGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAA :.::... :: KIAA00 RIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFVIEQL 300 310 320 330 340 350 >>KIAA0882 ( 1291 res) hk07544s1 (1291 aa) initn: 350 init1: 205 opt: 321 Z-score: 348.8 bits: 74.2 E(): 3.1e-14 Smith-Waterman score: 321; 35.616% identity (61.644% similar) in 146 aa overlap (15-160:585-727) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVL :::::::..: : : .. : : ::: KIAA08 GAINEKATHPGYYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNE--MGIAALRRVL 560 570 580 590 600 610 50 60 70 80 90 100 FLJ002 KAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGE ::.. :. :::::. ...:::.. :.::: :: .::..:: ::. .. . .: KIAA08 TAYAFRNPNIGYCQAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQG 620 630 640 650 660 670 110 120 130 140 150 160 FLJ002 ILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLG .. : . : . .. . . .. ::. : ..:. :.. : : :: :: KIAA08 VFEELARDYVPQLYDCMQDLGVISTISLS-WFLTLFLSVMPFESAVVVVDCFFYEGIKVI 680 690 700 710 720 730 170 180 190 200 210 FLJ002 LGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP KIAA08 FQLALAVLDANVDKLLNCKDDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLSDDVEPYP 740 750 760 770 780 790 >>KIAA1108 ( 763 res) hh03387s1 (763 aa) initn: 315 init1: 200 opt: 316 Z-score: 345.1 bits: 72.8 E(): 5e-14 Smith-Waterman score: 316; 37.241% identity (60.690% similar) in 145 aa overlap (18-161:446-590) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVLKAY :: : :: : .: .. : :: .:. .:::: KIAA11 HQFPSKQQPKDVPYKELLKQLTSQQHAILIDLGRTFPTHPYFSAQLGAGQLSLYNILKAY 420 430 440 450 460 470 50 60 70 80 90 100 FLJ002 TLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCL-VQICEKYLPGYYSEKLEAIQLDGEIL .: : ::::. . .:..::.:: :.:: : . . : : . .:.. : KIAA11 SLLDQEVGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQL 480 490 500 510 520 530 110 120 130 140 150 160 FLJ002 FSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLGLG ::. ..:: ...: : :: . ::. :. .: . : ::.::.: .:: KIAA11 SRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTMFASQFPLGFVARVFDMIFLQGTEVIFK 540 550 560 570 580 590 170 180 190 200 210 FLJ002 GAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP KIAA11 VALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTINQVFEMDIAKQLQAYEVE 600 610 620 630 640 650 >>KIAA0676 ( 1262 res) hk02596 (1262 aa) initn: 338 init1: 191 opt: 315 Z-score: 342.4 bits: 73.0 E(): 7.1e-14 Smith-Waterman score: 315; 35.616% identity (61.644% similar) in 146 aa overlap (15-160:565-707) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVL :::::::..: : : .. : : ::: KIAA06 GAWNEMVTHPGYYAELVEKSTGKYSLATEEIERDLHRSMPEHPAFQNE--LGIAALRRVL 540 550 560 570 580 590 50 60 70 80 90 100 FLJ002 KAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGE ::.. : :::::. ...:::.. :.::: :: .::..:: ::. .. . .: KIAA06 TAYAFRNPTIGYCQAMNIVTSVLLLYGSEEEAFWLLVALCERMLPDYYNTRVVGALVDQG 600 610 620 630 640 650 110 120 130 140 150 160 FLJ002 ILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLG :. : . : .... . . .. ::. : ..:. :.. . : :: :: KIAA06 IFEELTRDFLPQLSEKMQDLGVISSISLS-WFLTLFLSVMPFESAVVIVDCFFYEGIKVI 660 670 680 690 700 710 170 180 190 200 210 FLJ002 LGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP KIAA06 LQVALAVLDANMEQLLGCSDEGEAMTMLGRYLDNVVNKQSVSPPIPHLRALLSSSDDPPA 720 730 740 750 760 770 >>KIAA0603 ( 1348 res) hg01488b (1348 aa) initn: 301 init1: 203 opt: 301 Z-score: 327.0 bits: 70.2 E(): 5.1e-13 Smith-Waterman score: 301; 37.333% identity (61.333% similar) in 150 aa overlap (18-161:1019-1163) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLFRVLKAY :: : :: : .: . : :: .:: .:::: KIAA06 HRLPNKQQPPDISYKELLKQLTAQQHAILVDLGRTFPTHPYFSVQLGPGQLSLFNLLKAY 990 1000 1010 1020 1030 1040 50 60 70 80 90 100 FLJ002 TLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCL------VQICEKYLPGYYSEKLEAIQL .: : ::::. . .:.:::.:: :::: : . . ..: : ..: ... :: KIAA06 SLLDKEVGYCQGISFVAGVLLLHMSEEQAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQL 1050 1060 1070 1080 1090 1100 110 120 130 140 150 160 FLJ002 DGEILFSLLQKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGT . ::. ..:: ...:.: :: . ::. :. . . : ::.:..: .:: KIAA06 S-----RLLHDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIFLQGT 1110 1120 1130 1140 1150 1160 170 180 190 200 210 FLJ002 GLGLGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP KIAA06 EVIFKVALSLLSSQETLIMECESFENIVEFLKNTLPDMNTSEMEKIITQVFEMDISKQLH 1170 1180 1190 1200 1210 1220 >>FLJ00332 ( 201 res) sj03652 (201 aa) initn: 263 init1: 263 opt: 263 Z-score: 292.1 bits: 61.0 E(): 4.5e-11 Smith-Waterman score: 263; 51.562% identity (84.375% similar) in 64 aa overlap (97-160:6-69) 70 80 90 100 110 120 FLJ002 LLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKI ::..::.:....::... : .::::.. . FLJ003 WTWPQEAVRLDAEVFMALLRRLLPHVHKHLQQVGV 10 20 30 130 140 150 160 170 180 FLJ002 DPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEGTGLGLGGAPLSPAAHSGASLCRETPK ::::. :::.: :.:.::. .:::::: :. :: FLJ003 GPLLYLPEWFLCLFARSLPFPTVLRVWDAFLSEGEWGSQWLGQEPWGVGGEVAHQLQGSL 40 50 60 70 80 90 190 200 210 FLJ002 SFLVLTAHPPCRGQDHLPGGAGAAEARAGLP FLJ003 FEPQITGLGVPKVMAWCLALHHPSPITQAPPGAELGQGGFQRRQMGQEQGDHSTWRPELL 100 110 120 130 140 150 >>KIAA1322 ( 702 res) fh13826 (702 aa) initn: 251 init1: 124 opt: 249 Z-score: 272.8 bits: 59.3 E(): 5.4e-10 Smith-Waterman score: 249; 28.667% identity (64.000% similar) in 150 aa overlap (12-160:472-620) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLF :..:. :. : :: .: ..:: .. : KIAA13 AKERWRSLSTGGSEVENEDAGFSAADREASLELIKLDISRTFPNLCIF-QQGGPYHDMLH 450 460 470 480 490 500 50 60 70 80 90 100 FLJ002 RVLKAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQL .: ::: :::. :: :... :::::.... . .:: . .. .: . . ....: KIAA13 SILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLML 510 520 530 540 550 560 110 120 130 140 150 160 FLJ002 DGEILFSLL-QKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCEG : .. .. : :...... : .:. .:.. .:..:: . . :.::.: .: KIAA13 TYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDG 570 580 590 600 610 620 170 180 190 200 210 FLJ002 TGLGLGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEARAGLP KIAA13 EEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLPEDLPAEELFASIATIQMQSRNKKWA 630 640 650 660 670 680 >>KIAA0608 ( 775 res) hh00889b (775 aa) initn: 225 init1: 127 opt: 247 Z-score: 270.3 bits: 59.0 E(): 7.4e-10 Smith-Waterman score: 247; 29.630% identity (62.346% similar) in 162 aa overlap (12-165:544-703) 10 20 30 40 FLJ002 ELDMSPGDPKWLDVIERDLHRQFPFHEMFVSRGGHGQQDLF :..:. :. : :: .: ..:: .. : KIAA06 SRAKERWKSFSETSSENDTEGVSVADREASLELIKLDISRTFPSLYIF-QKGGPYHDVLH 520 530 540 550 560 570 50 60 70 80 90 100 FLJ002 RVLKAYTLYRPEEGYCQAQAPIAAVLLMHMPAEQAFWCLVQICEKYLPGYYSEKLEAIQL .: ::: :::. :: :... :::::.... .:: .... .: . . ....: KIAA06 SILGAYTCYRPDVGYVQGMSFIAAVLILNLEEADAFIAFANLLNKPCQLAFFRVDHSMML 580 590 600 610 620 630 110 120 130 140 150 FLJ002 DGEILFSLL--QKVSPVAHKHLSRQKIDPLLYMTEWFMCAFSRTLPWSSVLRVWDMFFCE : .. ...: . :.. .. : .:. .:.. .:..:: . . ::::.: . KIAA06 KYFATFEVFFEENLSKL-FLHFKSYSLTPDIYLIDWIFTLYSKSLPLDLACRVWDVFCRD 640 650 660 670 680 690 160 170 180 190 200 210 FLJ002 G------TGLGLGGAPLSPAAHSGASLCRETPKSFLVLTAHPPCRGQDHLPGGAGAAEAR : ::::. KIAA06 GEEFLFRTGLGILRLYEDILLQMDFIHIAQFLTKLPEDITSEKLFSCIAAIQMQNSTKKW 700 710 720 730 740 750 217 residues in 1 query sequences 2210777 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:51:07 2009 done: Fri Feb 27 10:51:08 2009 Total Scan time: 0.380 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]