# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh02088.fasta.huge -Q ../query/FLJ00283.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00283, 500 aa vs ./tmplib.10216 library 2210494 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 6.4170+/-0.00778; mu= 14.7429+/- 0.524 mean_var=347.2973+/-75.859, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.068821 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00053 ( 443 res) as00053 ( 443) 2776 288.9 6e-79 FLJ00321 ( 245 res) sh07670 ( 245) 575 69.9 2.8e-13 FLJ00353 ( 1766 res) sh01144 (1766) 163 30.5 1.4 FLJ00201 ( 705 res) sj04110 ( 705) 156 29.1 1.5 FLJ00280 ( 440 res) sh01728 ( 440) 151 28.2 1.7 KIAA1870 ( 832 res) hh05136b ( 832) 151 28.7 2.3 KIAA0672 ( 824 res) hk02382 ( 824) 145 28.1 3.4 FLJ00104 ( 287 res) as00104 ( 287) 136 26.4 4 KIAA1902 ( 1112 res) hj04383 (1112) 143 28.2 4.5 KIAA1075 ( 1505 res) hj06716s1 (1505) 143 28.4 5.1 KIAA0450 ( 1182 res) hj05822 (1182) 141 28.0 5.3 KIAA2035 ( 1135 res) ff09201 (1135) 139 27.8 6 KIAA0346 ( 1682 res) hg01508s1 (1682) 141 28.3 6.2 KIAA1949 ( 662 res) fj02913 ( 662) 135 27.0 6.2 KIAA1511 ( 1253 res) fg04486(revised) (1253) 137 27.7 7.1 KIAA0985 ( 697 res) hj08038 ( 697) 131 26.6 8.3 FLJ00085 ( 292 res) as00085 ( 292) 124 25.2 9.2 KIAA1355 ( 1189 res) fj01564 (1189) 133 27.2 9.2 KIAA1760 ( 2219 res) af00030 (2219) 134 27.8 11 FLJ00160 ( 1696 res) sh06621 (1696) 131 27.3 12 KIAA0239 ( 849 res) ha06313 ( 849) 126 26.3 13 KIAA1869 ( 935 res) hh01800 ( 935) 125 26.3 14 KIAA1926 ( 412 res) hh10052 ( 412) 119 25.0 15 KIAA0269 ( 567 res) ha06751 ( 567) 121 25.5 15 KIAA1236 ( 1840 res) pg00641 (1840) 128 27.1 16 KIAA1683 ( 832 res) fh24307 ( 832) 122 25.9 17 KIAA0339 ( 1709 res) hg01304(revised) (1709) 126 26.8 17 KIAA1197 ( 1487 res) fg01844 (1487) 125 26.6 18 KIAA0669 ( 825 res) hk02346 ( 825) 119 25.6 20 KIAA2029 ( 1021 res) pj01256 (1021) 120 25.8 21 KIAA0618 ( 1052 res) hg03971 (1052) 119 25.8 23 KIAA1535 ( 711 res) fk12792 ( 711) 116 25.1 24 KIAA1056 ( 870 res) hh11792 ( 870) 117 25.4 24 FLJ00198 ( 677 res) sj03504 ( 677) 115 25.0 25 KIAA1271 ( 542 res) hk06527 ( 542) 113 24.6 26 KIAA1690 ( 482 res) fh27434 ( 482) 112 24.4 26 KIAA1139 ( 1124 res) hk00330 (1124) 117 25.6 27 KIAA0910 ( 1315 res) hg02207s1 (1315) 118 25.8 27 KIAA1142 ( 467 res) hh05864 ( 467) 110 24.2 29 KIAA0881 ( 1064 res) hk07534 (1064) 115 25.4 30 KIAA1458 ( 612 res) fh16694 ( 612) 111 24.5 31 KIAA1259 ( 1561 res) hh15706 (1561) 117 25.9 31 KIAA1547 ( 863 res) fh14154 ( 863) 113 25.0 31 KIAA0482 ( 1332 res) hj01880 (1332) 115 25.5 33 KIAA1399 ( 452 res) hk07377 ( 452) 108 24.0 33 KIAA1193 ( 544 res) fg00739 ( 544) 109 24.2 34 FLJ00235 ( 141 res) sj07209 ( 141) 100 22.3 34 KIAA0737 ( 629 res) hk03869 ( 629) 109 24.3 36 KIAA0954 ( 1183 res) hj05543s1 (1183) 113 25.3 36 KIAA0542 ( 1212 res) hg04325s1 (1212) 112 25.2 39 >>FLJ00053 ( 443 res) as00053 (443 aa) initn: 2858 init1: 2776 opt: 2776 Z-score: 1510.7 bits: 288.9 E(): 6e-79 Smith-Waterman score: 2776; 98.477% identity (99.239% similar) in 394 aa overlap (1-394:1-394) 10 20 30 40 50 60 FLJ002 RFFSNRIIVSDQSSARSPEVRRMRELLCLEQGGPADALRSAALPPVPHRSFGWGFRSSPA :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: FLJ000 RFFSNRIIVSDQSSARSPEVRRMRELLCSEQGGPADALRSAALPPVPHRSFGWGFRSSPA 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 HTPCGWGAWGRCNGRAWGQDRWEGRGWPASVPGGLTLGVEVTSGPAAHRAQGYHEGPALS ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: FLJ000 HTPCGWGAWGRCNGRAWGQDRWEGRGWPASVPGGLTIGVEVTSGPAAHRAQGYHEGPALS 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 SGVSECLGESRPGEDGGTGPALQECTVGTLPPPRPRREGRSLPQSGRCTHLGTPGRLGAP ::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::: FLJ000 SGVSECLGESRPGEDGGTGPALQECIVGTLPPPRPRREGRSLPQSGRCTHLGTPGRLGAP 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 HPCPPERALPLSLGAWPGPPGGPSVSAPKDIRSVRPISLVRPVLPATLSHGVPWPVACRE :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: FLJ000 HPCPPERALPLSLGAWPGPPGGPSVSAPKDIRSVRPISLVRPVLPATLSHGIPWPVACRE 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 CFSGGVPTPWLICPRLAGDIRSTANLSRSQGRGTHLAFVSSPQALRTQAFQVLLQPLACV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 CFSGGVPTPWLICPRLAGDIRSTANLSRSQGRGTHLAFVSSPQALRTQAFQVLLQPLACV 250 260 270 280 290 300 310 320 330 340 350 360 FLJ002 LKATVQAPGPPGLLDGTADDATTVDTLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 LKATVQAPGPPGLLDGTADDATTVDTLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQ 310 320 330 340 350 360 370 380 390 400 410 420 FLJ002 ASLLGATVTVLRLCDGSAAPASSVGGHLCGTPGGLRPGPASSPRLPGDAVTGDRPPGAGD ::::::::::::::::::::::::::::::: .: FLJ000 ASLLGATVTVLRLCDGSAAPASSVGGHLCGTLAGCVRVQRAALDFLGTLSQGTGPQELVT 370 380 390 400 410 420 430 440 450 460 470 480 FLJ002 AGACCPPGVPREPRLQPHGTVVGIESEERREAEAVGPTPDSTPSRAGLCGWGLHTGPQSC FLJ000 QALAVLLECLESPGSSPTVRWWG 430 440 >>FLJ00321 ( 245 res) sh07670 (245 aa) initn: 631 init1: 560 opt: 575 Z-score: 331.7 bits: 69.9 E(): 2.8e-13 Smith-Waterman score: 575; 62.893% identity (75.472% similar) in 159 aa overlap (245-394:37-187) 220 230 240 250 260 270 FLJ002 RPISLVRPVLPATLSHGVPWPVACRECFSGGVPTPWLICPRLAGDIRSTANLSRSQGRGT : : : :.. .. :.:....: :: FLJ003 PDPQVCCLERAGRAEPGSLRLGEGRWMRVAGSPPP----PHFN---HTQASLQEQRGPGT 10 20 30 40 50 280 290 300 310 320 FLJ002 H----LAFVSSPQA-----LRTQAFQVLLQPLACVLKATVQAPGPPGLLDGTADDATTVD .. :.:.. . : .. : . : : :. : :::::::::::::::: FLJ003 WPSPLVSCCSAPRSWPVLWVVTVGWLVTVGRLKCSLRELFLA-WPPGLLDGTADDATTVD 60 70 80 90 100 110 330 340 350 360 370 380 FLJ002 TLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVLRLCDGSAAPASSVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ003 TLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVLRLCDGSAAPASSVG 120 130 140 150 160 170 390 400 410 420 430 440 FLJ002 GHLCGTPGGLRPGPASSPRLPGDAVTGDRPPGAGDAGACCPPGVPREPRLQPHGTVVGIE :::::: .: FLJ003 GHLCGTLAGCVRVQRAALDFLGTLSQGTGECVLYGFGVGLSLCPHSPFCSEAPGNCCPSL 180 190 200 210 220 230 >>FLJ00353 ( 1766 res) sh01144 (1766 aa) initn: 113 init1: 78 opt: 163 Z-score: 103.8 bits: 30.5 E(): 1.4 Smith-Waterman score: 185; 25.886% identity (42.234% similar) in 367 aa overlap (150-496:152-467) 120 130 140 150 160 170 FLJ002 SSGVSECLGESRPGEDGGTGPALQECTVGTLPPPRPRREGRSLPQSGRCTHLGTPGRLGA .::: : :: : . : : : FLJ003 LQEKVNSFQNMKNQYMGNMSMPPPFVPYSQMPPPLPTMPPPVLPPSLPPPVM--PPALPA 130 140 150 160 170 180 190 200 210 220 230 FLJ002 --PHPCPPERALPLSLGAWPGPPGGPSVSAPKDIRSVRPISLVRPVLPA-TLSHGVPWPV : : : ..: :: . ::: : .. :. : :::: .:: . : :: FLJ003 TVPPPGMPPPVMPPSLPTSVPPPG-----MPPSLSSAGPP----PVLPPPSLSSAGPPPV 180 190 200 210 220 230 240 250 260 270 280 290 FLJ002 ACRECFSGGVPTPWLICPRL--AGDIRSTANLSRSQGRGTHLAFVSSPQALRTQAFQVLL .:. .: : . : : : . . :: .:. . : : .:. :: FLJ003 LPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPE 240 250 260 270 280 290 300 310 320 330 340 350 FLJ002 QPLACVLKATVQAPGPPGLLDGTADDATTVDTLLASKSSCAGLLCRTLAHLEELQPLPQR .: .: : : .. :.: .: : .. : ... :: . FLJ003 KPRPALL------PTPVSF--GSAPPTTYHPPLQSAGPS---------EQVNSKAPLSKS 300 310 320 330 360 370 380 390 400 410 FLJ002 PSPWPQASLLGATVTVLRLCDGSAAPASSVGGHLCGTP---GGLRPGPASSPRLPGDAVT :. . : . : ..::::.. . . . : ::: : : : : .. FLJ003 ALPYSSFS------SDQGLGESSAAPSQPITA-VKDMPVRSGGLLPDPPRSSYL--ESPR 340 350 360 370 380 420 430 440 450 460 FLJ002 GDRPPGAG---DAGACCPPGVPREPRLQPHGTVVGIESEERREAEAVGPTP--DSTPSRA : : : : :. : :. ::.. : . . :: : .. :... FLJ003 GPRFDGPRRFEDLGSRCEGPRPKGPRFE------GNRPD--------GPRPRYEGHPAEG 390 400 410 420 430 470 480 490 500 FLJ002 GLCGWGL-HTGPQS------CCSESFTMQVAAWGGPRASCW ::. :: : : : .. : ::. FLJ003 TKSKWGMIPRGPASQFYITPSTSLSPRQSGPQWKGPKPAFGQQHQQQPKSQAEPLSGNKE 440 450 460 470 480 490 FLJ003 PLADTSSNQQKNFKMQSAAFSIAADVKDVKAAQSNENLSDSQQEPPKSEVSEGPVEPSNW 500 510 520 530 540 550 >>FLJ00201 ( 705 res) sj04110 (705 aa) initn: 120 init1: 75 opt: 156 Z-score: 103.2 bits: 29.1 E(): 1.5 Smith-Waterman score: 207; 28.571% identity (44.286% similar) in 420 aa overlap (83-470:60-435) 60 70 80 90 100 110 FLJ002 WGFRSSPAHTPCGWGAWGRCNGRAWGQDRWEGRGWPASVPGGLTLGVEVTSGPAAHRAQG ::.: .: : : ... . :. : FLJ002 SGGGAGGAAGYAPVKYIQPMQKGPVGPPFREGKGQYLEMPLPL-LPMDLKGEPGPPGKPG 30 40 50 60 70 80 120 130 140 150 160 170 FLJ002 YHEGPALSSGVSECLGESRPGEDGGTGPALQECTVGTLPPPRPRREGRSLPQSGRCTHLG .:: : : ..:: : ::: : :: : :.. : : FLJ002 -PRGPPGPPGFPGKPGMGKPGLHGQPGPA------G---PPGFSRMGKAGPP-------G 90 100 110 120 130 180 190 200 210 220 230 FLJ002 TPGRLGAPHPCPPERALPLSLGAWP--GPPGGPSVSAPKDIRSVRPISLVRPVLPATLSH ::..: : : :. : : :::: :.. .:. : .. : :. .. FLJ002 LPGKVGPPGQ-PGLRGEPGIRGDQGLRGPPGPPGLPGPSGI-TI-------PGKPG--AQ 140 150 160 170 180 240 250 260 270 280 FLJ002 GVPWPVACR-ECFSGGVPTPWLICPR-LAGDIR-STANLSRSQGRGTHLAF--VSSPQAL ::: : . . : : : : : : :: . .: . :.: . . .: .: FLJ002 GVPGPPGFQGEPGPQGEPGP--PGDRGLKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGL 190 200 210 220 230 290 300 310 320 330 340 FLJ002 RTQAFQVLLQPLACVLKATVQAPGPPGLLDGTADDATTVDTLLASKSSCAGLLCRTLAHL ... : : : :. ::::. : . .: . . :. : : FLJ002 GKPGLDGL--PGAPGDKG---ESGPPGV-PGPRGEPGAVGP--KGPPGVDGVGVPGAAGL 240 250 260 270 280 290 350 360 370 380 FLJ002 EELQPLPQRPS-----PWPQA--SLLGAT---VTVLRLCDGSAAPASSVGGHLC------ : :: :: : .. .:.: : . : :. .::. : : : FLJ002 ----PGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAG-VPGLLGDRGEPG 300 310 320 330 340 390 400 410 420 430 440 FLJ002 --GTPGGLRP-GPASSPRLPGDA-VTGDR-PPGA-GDAGACCPPGVPREPRLQ-PHGTV- : :: : : .. : :::.: . : : ::: :.:: ::::: : : : . FLJ002 EDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAG 350 360 370 380 390 400 450 460 470 480 490 500 FLJ002 -VGIESEERREAEAVGPTPDSTPSRAGLCGWGLHTGPQSCCSESFTMQVAAWGGPRASCW :. .:. . : : . .. :. : FLJ002 KPGVPGERGLPGAHGPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPGLRGPSG 410 420 430 440 450 460 >>FLJ00280 ( 440 res) sh01728 (440 aa) initn: 97 init1: 74 opt: 151 Z-score: 102.2 bits: 28.2 E(): 1.7 Smith-Waterman score: 157; 31.250% identity (50.000% similar) in 176 aa overlap (148-306:224-387) 120 130 140 150 160 170 FLJ002 ALSSGVSECLGESRPGEDGGTGPALQECTVGTLPPPRPRREGRSLPQSGRCTHLGT---P ::::::: .:: :: :: : FLJ002 DTPPSRDIPLSLDAPLSLDTPYSRDTLPATGTLPPPRTLPSPGTLPPSGTLPPPGTVPTP 200 210 220 230 240 250 180 190 200 210 220 230 FLJ002 GRLGAPHPCPPERALPLSLGAWPGPPGGPSVSAPKDIRSVRPISLVRP----VLPATLSH : : .: : :.:: :. :.: :. :. . . : .: :: :: .:.. FLJ002 GTLPSPGTLPAPRTLPTP-GTLPSPRTLPT---PRTLPT--PGTLPRPGTSYVLYGTVG- 260 270 280 290 300 240 250 260 270 280 FLJ002 GVPW-----PVACRECFSGGVPTPW---LICP-RLAGDIRSTANLSRSQGRGTHLAFVSS : : : :.: :. . . . : :..:. .. ::. : :. : FLJ002 GRAWGLSFPPSLIRRCTMRGLSVAFREVMGCRWRFGGSGEGGWLCSRGCP-GEPRALCPS 310 320 330 340 350 360 290 300 310 320 330 340 FLJ002 PQALRTQ-AFQVLLQPLACVLKATVQAPGPPGLLDGTADDATTVDTLLASKSSCAGLLCR : . : : .:.... : .::.: FLJ002 PPTPRPQLSFHAVM----VVHRATAQKCLLHAHHTPRDAMRRPGRWLGAQLWGFGVRLAV 370 380 390 400 410 420 >>KIAA1870 ( 832 res) hh05136b (832 aa) initn: 196 init1: 84 opt: 151 Z-score: 100.0 bits: 28.7 E(): 2.3 Smith-Waterman score: 219; 27.163% identity (44.471% similar) in 416 aa overlap (86-478:2-368) 60 70 80 90 100 110 FLJ002 RSSPAHTPCGWGAWGRCNGRAWGQDRWEGRGWPASVPGGLTLGVEVTSGPAAHRAQGYHE : :. .::: .:. :: . KIAA18 GGHPG-MPGG--MGTPGEPGP---------Q 10 120 130 140 150 160 170 FLJ002 GPALSSGVSECLG-ESRPGEDGGTGPALQECTVGTLPPPRPR-REGRSLPQ--SGRCTHL :: : : : ..: : : ::: .. . : :: :. : :: : .:. :: KIAA18 GPPGSRGPPGMRGAKGRRGPRGPDGPAGEQGSRGLKGPPGPQGRPGRPGQQGVAGERGHL 20 30 40 50 60 70 180 190 200 210 220 FLJ002 GTPGRLGAPHPC-PP-ERALPLSLGAWPGP--PGGPSVSAPKDIRSVRPISLV-RPVLPA :. : : : : :: ..:: : ::: : :: .. : .. : . : .: ::. KIAA18 GSRGFPGIPGPSGPPGTKGLP---GE-PGPQGPQGP-IGPPGEMGPKGPPGAVGEPGLPG 80 90 100 110 120 130 230 240 250 260 270 280 FLJ002 TLS-HGVPWPVACRECFSGGVPTPW-LIC----PRLAGDIRSTANLSRSQGRGTHLAFVS . .: :. :.: :: : : :: . . . :: KIAA18 EAGMKGDLGPL--------GTPGEQGLIGQRGEPGLEGDSGPMGPDGLKGDRGD-----P 140 150 160 170 180 290 300 310 320 330 340 FLJ002 SPQALRTQAFQVLLQPLACVLKATVQAPGPPGLLDGTADDATTVDTLLASKSSCAGLLCR .:.. . . : :. . :::::. . .. . .... : KIAA18 GPDGEHGEKGQEGLM-------GEDGPPGPPGVTGVRGPEGKSGKQGEKGRTGAKGAKGY 190 200 210 220 230 350 360 370 380 390 FLJ002 TLAHLEELQPLPQRP----SPWPQASL--LGATVTVLRLCDGSAAPASSVGGHLCGTPGG ..: :. .: : .: :..: :: : . :. . .. :: : : KIAA18 Q-GQLGEMG-VPGDPGPPGTPGPKGSRGSLGPTGAPGRMGAQGEPGLAGYDGHK-GIVGP 240 250 260 270 280 290 400 410 420 430 440 450 FLJ002 LRP-GPASSPRLPGDAVTGDRPPGA-GDAGACCPPGVPREPRLQPHGTVVGIESEERREA : : :: . :. .. ::: :: : : : : : .: : ..: .. KIAA18 LGPPGPKGEKGEQGEDGKAEGPPGPPGDRG---PVG-DRGDRGEPGDP--GYPGQEGVQG 300 310 320 330 340 460 470 480 490 500 FLJ002 EAVGPTPDSTPSRAGLCGWGLHTGPQSCCSESFTMQVAAWGGPRASCW : .. :.. : :: ::. KIAA18 LRGKPGQQGQPGHPGPRGW---PGPKGSKGAEGPKGKQGKAGAPGRRGVQGLQGLPGPRG 350 360 370 380 390 400 >>KIAA0672 ( 824 res) hk02382 (824 aa) initn: 142 init1: 59 opt: 145 Z-score: 96.8 bits: 28.1 E(): 3.4 Smith-Waterman score: 151; 28.866% identity (48.454% similar) in 194 aa overlap (297-479:542-712) 270 280 290 300 310 320 FLJ002 SRSQGRGTHLAFVSSPQALRTQAFQVLLQPLACVLKATVQAPGPPGLLDGTADDATT--- ..:. ..: :.::. : . . KIAA06 KDGLRKIQSMGVRVMDTNWVARRGSSAGRKVSCA-PPSMQPPAPPAELAAPLPSPLPEQP 520 530 540 550 560 570 330 340 350 360 370 380 FLJ002 VDTLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVLRLCDGSA---AP .:. : : .:: ::: :.: : :. .: ::: .: KIAA06 LDSPAAPALSPSGL---------GLQPGPERTS----------TTKSKELSPGSAQKGSP 580 590 600 610 390 400 410 420 430 FLJ002 ASSVGGHLCGTPGGLRPG--PASSPRLPGDAVTGDRPPGAGDAGACCPPGVPREPRLQPH .:: : :: : .:: :..:: :.. . . : .. : :. : :: KIAA06 GSSQGTACAGTQPGAQPGAQPGASPS-PSQPPADQSPHTLRKVSKKLAPIPPKVPFGQP- 620 630 640 650 660 440 450 460 470 480 490 FLJ002 GTVVGIESEERREAEAVGPTPDSTPSRAGLC---GWGLHTGPQSCCSESFTMQVAAWGGP :... .: . ...::: :::: :: :..: .: : KIAA06 GAMAD-QSAGQLSPVSLSPTPPSTPSPYGLSYPQGYSLASGQLSPAAAPPLASPSVFTST 670 680 690 700 710 720 500 FLJ002 RASCW KIAA06 LSKSRPTPKPRQRPTLPPPQPPTVNLSASSPQSTEAPMLDGMSPGESMSTDLVHFDIPSI 730 740 750 760 770 780 >>FLJ00104 ( 287 res) as00104 (287 aa) initn: 202 init1: 131 opt: 136 Z-score: 95.6 bits: 26.4 E(): 4 Smith-Waterman score: 146; 26.174% identity (43.624% similar) in 298 aa overlap (141-432:7-239) 120 130 140 150 160 170 FLJ002 QGYHEGPALSSGVSECLGESRPGEDGGTGPALQECTVGTLPPPRPRREGRSLPQSGRCTH ::. .:: : ::.::.:..: : : FLJ001 LLPEKCALMWLHLGTRAPQRPKRESRGFPGWGCRTG 10 20 30 180 190 200 210 220 230 FLJ002 LGTPGRLGAPHPCPPERALPLSLGAWPGPPGGPSVSAPKDIRSVRPISLVRPVLPATLSH . : : : : : . . ::: ::: :.: ..: : . : :.: FLJ001 QALPCRARPPAPAPSHPSSSLSLT--PGP-GSPRQTGP-------PCQTV-----AALYG 40 50 60 70 80 240 250 260 270 280 FLJ002 GVPWPVACRECFSGGVPTPWLICPRLAGDIRSTANLSRSQGRGTHLA--FVSSPQALRTQ : : .::: : :. :. . :: . : .. :: ..:. FLJ001 LGAWQSHC----GGGVG-----CH---GQGRQPLG---CQGWWSTLNPYLLESPGLFHTR 90 100 110 120 290 300 310 320 330 340 FLJ002 AFQVLLQPLACVLKATVQAP---GPPGLLDGTADDATTVDTLLASKSSC-AGLLCRTLAH . : .: : ........ : :: :. .: .: : : :: FLJ001 SCGKLWDPKAVLISGVTSSHSSLGSPGTRPGV--------SLCKELPGCWAELCCRP--- 130 140 150 160 170 350 360 370 380 390 400 FLJ002 LEELQPLPQRPSPWPQASLLGATVTVLRLCDGSAAPASSVGGHLCGTPGGLRPGPASSPR . . .. :. :::. .:. : : . : : :: FLJ001 ----RKMTKKDRAEPHLPLLGGP-------EGARAQQSPILHSL---------GSKRLPR 180 190 200 210 410 420 430 440 450 460 FLJ002 LPGDAVTGDRPPGAGDAGACCPPGVPREPRLQPHGTVVGIESEERREAEAVGPTPDSTPS . .:.. .: ::. :: : :: FLJ001 CGWQLLTSS----GGAAGGLCPMGHRREKDGGRVCTLGRTGGRHRPEQVAWAHEKGVSET 220 230 240 250 260 270 >>KIAA1902 ( 1112 res) hj04383 (1112 aa) initn: 131 init1: 92 opt: 143 Z-score: 94.7 bits: 28.2 E(): 4.5 Smith-Waterman score: 145; 22.709% identity (45.817% similar) in 251 aa overlap (117-352:514-749) 90 100 110 120 130 140 FLJ002 WPASVPGGLTLGVEVTSGPAAHRAQGYHEGPALSSGVSECLGESRPGEDGGTGPALQECT :...::. .: :.. .::.. . KIAA19 QSTLEKKIHELEKQGTIKIQKKGDGDIAILPVVASGTLSMGSEVVAGNS--VGPTMGAAS 490 500 510 520 530 540 150 160 170 180 190 200 FLJ002 VGTLPPPRPRREGRSLPQSGRCTHLGTPGRLGAPHPCPPERALPLSLGAWPGPPGGPSVS : :::: : :: :. . : . : : :: : : :: : KIAA19 SGPLPPPPP-----PLPPSSDTPETVQNGPVTPPMPPPPPPPPP---PPPPPPPPPPPPP 550 560 570 580 590 210 220 230 240 250 260 FLJ002 APKDIRSVRPISLVRPVLPATLSHGVPWPVACRECFSGGVPTPWLICP---RLAGDIRST : . : . : ::. . .: . :..:. . . : .. . . KIAA19 LPGPASETVPAPPLAPPLPS--APPLPGTSSPTVVFNSGLAAVKIKKPIKTKFRMPVFNW 600 610 620 630 640 650 270 280 290 300 310 FLJ002 ANLSRSQGRGTHLAFVSSPQALRT-------QAFQVLLQPLACVLKATVQAPGPPG---- . :. .: :: . ... . :. . :.. : : :... : : KIAA19 VALKPNQINGTVFNEIDDERILEDLNVDEFEEIFKTKAQGPAIDLSSSKQKIPQKGSNKV 660 670 680 690 700 710 320 330 340 350 360 370 FLJ002 -LLDGTADDATTVDTLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVL ::. :. : .. : . .. : .:... :. .:. :: KIAA19 TLLE--ANRAKNLAITLRKAGKTADEICKAI-HVFDLKTLPVDFVECLMRFLPTENEVKV 720 730 740 750 760 380 390 400 410 420 430 FLJ002 RLCDGSAAPASSVGGHLCGTPGGLRPGPASSPRLPGDAVTGDRPPGAGDAGACCPPGVPR KIAA19 LRLYERERKPLENLSDEDRFMMQFSKIERLMQKMTIMAFIGNFAESIQMLTPQLHAIIAA 770 780 790 800 810 820 >>KIAA1075 ( 1505 res) hj06716s1 (1505 aa) initn: 83 init1: 55 opt: 143 Z-score: 93.6 bits: 28.4 E(): 5.1 Smith-Waterman score: 188; 27.251% identity (43.839% similar) in 422 aa overlap (80-477:806-1184) 50 60 70 80 90 100 FLJ002 SFGWGFRSSPAHTPCGWGAWGRCNGRAWGQDRWEGRGWPASVPGGLTLGVEVTSG---PA .: :.:: . . : : : : : KIAA10 EDPGLPALYPCPACEEKLALPTAALYGLRLEREAGEGWASEA--GKPLLHPVRPGHPLPL 780 790 800 810 820 830 110 120 130 140 150 160 FLJ002 AHRAQGYHEGPALSSGVSECLGESRPGEDGGTGPALQECTVGTLPPP-RP----RREGRS : :.:..: . . :: . ::.: : . : : : : : . KIAA10 LLPACGHHHAPMPDYS---CLKPPKAGEEGHEGCSYTMCPEGRYGHPGYPALVTYSYGGA 840 850 860 870 880 890 170 180 190 200 210 FLJ002 LPQS----GRCTH-LGTPGRLGAPHPCPPERALPLSLGAWPGPPGGP-SVSAPKDIRSVR .:. :: : :.::. : .: : .. : . . :: : : : . .: . . KIAA10 VPSYCPAYGRVPHSCGSPGE-GRGYPSPGAHS-PRAGSISPGSPPYPQSRKLSYEIPTEE 900 910 920 930 940 220 230 240 250 260 FLJ002 PISLVRPVLPATLSHGVPW-------PVACRECFSGGVPTPWLICPRLAGDIRSTANLSR . : ::. :. . : ::. :: :: : :: : .:. :. KIAA10 GGD--RYPLPGHLASAGPLASAESLEPVSWREGPSGHSTLPR--SPR---DAPCSAS-SE 950 960 970 980 990 1000 270 280 290 300 310 320 FLJ002 SQGRGTHLAFVSSP-QALRTQAFQVLLQPLACVLKATVQAPGPPGLLDGTADDATTVDTL .: .: : .::: :. .. : .: . : .: .: : ... .: KIAA10 LSGPSTPL-HTSSPVQGKESTRRQDTRSPTS----APTQRLSPGEALPPVSQAGTGKAPE 1010 1020 1030 1040 1050 330 340 350 360 370 380 FLJ002 LASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVLRLCDGSAAPASSVGGH : : :. : . . . : :. :: ::: :. :: :.: : : KIAA10 LPSGSGPEPL---APSPVSPTFP-PSSPSDWPQERSPGGH------SDG-ASPRSPVPTT 1060 1070 1080 1090 1100 390 400 410 420 430 440 FLJ002 LCGTPGGLRPGPASSPRLPGDAVTGDRPPGAGDAGACCPPGV--PREPRLQPHGTVVGIE : :: :: .: ..:: : :. :. : . . : : :. :. .: . KIAA10 L---PG-LRHAPWQGPRGPPDSPDGS-P--LTPVPSQMPWLVASPEPPQSSPTPAFPLAA 1110 1120 1130 1140 1150 450 460 470 480 490 500 FLJ002 SEERREAEAVGPTPDSTPSRAGLCGWGLHTGPQSCCSESFTMQVAAWGGPRASCW : . : . : . : : : . :: KIAA10 SYDTN-----GLSQPPLPEKRHLPGPGQQPGPWGPEQASSPARGISHHVTFAPLLSDNVP 1160 1170 1180 1190 1200 1210 KIAA10 QTPEPPTQESQSNVKFVQDTSKFWYKPHLSRDQAIALLKDKDPGAFLIRDSHSFQGAYGL 1220 1230 1240 1250 1260 1270 500 residues in 1 query sequences 2210494 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:50:53 2009 done: Fri Feb 27 10:50:54 2009 Total Scan time: 0.580 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]