# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sh00869.fasta.huge -Q ../query/FLJ00123.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00123, 255 aa vs ./tmplib.10216 library 2210739 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 7.9648+/-0.00567; mu= -1.0316+/- 0.380 mean_var=189.2627+/-42.094, 0's: 0 Z-trim: 4 B-trim: 7 in 1/39 Lambda= 0.093227 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1098 ( 504 res) hk07318 ( 504) 200 38.2 0.001 KIAA0517 ( 792 res) hg00752 ( 792) 158 32.7 0.071 KIAA0898 ( 979 res) hk09541 ( 979) 152 32.0 0.15 KIAA1113 ( 1131 res) hj06379(revised) (1131) 143 30.8 0.38 KIAA0282 ( 711 res) ha06845s1 ( 711) 127 28.5 1.2 KIAA0835 ( 1167 res) hj05861 (1167) 128 28.8 1.6 KIAA1835 ( 623 res) fh08795s1 ( 623) 122 27.8 1.7 KIAA1951 ( 679 res) fj05532 ( 679) 120 27.5 2.2 KIAA0007 ( 686 res) ha02056 ( 686) 117 27.1 2.9 KIAA1231 ( 1061 res) fh08195s1 (1061) 120 27.7 3.1 FLJ00416 ( 221 res) sj04686 ( 221) 107 25.4 3.2 KIAA1855 ( 1270 res) fg04654 (1270) 120 27.8 3.5 KIAA0702 ( 988 res) hg01814(revised) ( 988) 118 27.4 3.5 KIAA0339 ( 1709 res) hg01304(revised) (1709) 120 27.9 4.4 KIAA0383 ( 1781 res) hh00708s1 (1781) 120 27.9 4.5 KIAA0301 ( 3210 res) hf00402s1 (3210) 121 28.2 6.3 KIAA0800 ( 1521 res) hg03850s1 (1521) 111 26.6 9.3 KIAA1222 ( 742 res) fh03567 ( 742) 104 25.4 10 KIAA1189 ( 300 res) hg03032a ( 300) 96 24.0 11 KIAA1162 ( 115 res) hj05107 ( 115) 88 22.6 12 KIAA0490 ( 135 res) hh00727 ( 135) 89 22.8 12 KIAA0283 ( 1471 res) ha06139s1 (1471) 107 26.1 13 KIAA1192 ( 262 res) hj01820a ( 262) 93 23.5 13 KIAA1517 ( 998 res) fh11426(revised) ( 998) 103 25.4 14 KIAA1032 ( 1702 res) ff09715 (1702) 107 26.1 15 KIAA1783 ( 1560 res) fg01285 (1560) 106 26.0 15 KIAA0187 ( 1285 res) ha02920 (1285) 104 25.6 16 KIAA1529 ( 1680 res) hh04104(revised) (1680) 106 26.0 16 KIAA1927 ( 1325 res) hj03131 (1325) 102 25.4 19 KIAA0312 ( 3192 res) ff01724 (3192) 109 26.6 19 KIAA1401 ( 853 res) hk09639 ( 853) 98 24.7 20 KIAA1096 ( 1919 res) pf00402 (1919) 102 25.5 25 KIAA2014 ( 1032 res) ff00951s1 (1032) 97 24.6 25 KIAA0577 ( 1043 res) hj00291 (1043) 97 24.6 26 KIAA0680 ( 635 res) hk02746 ( 635) 93 23.9 26 KIAA1695 ( 1199 res) fj11471 (1199) 98 24.8 26 KIAA0819 ( 989 res) hh01037 ( 989) 96 24.4 27 KIAA1555 ( 2414 res) fh17482s2 (2414) 103 25.7 27 KIAA0853 ( 967 res) hk06136 ( 967) 95 24.3 29 KIAA1372 ( 773 res) fj03335 ( 773) 93 23.9 30 KIAA0403 ( 416 res) hg01159 ( 416) 88 23.0 30 KIAA2001 ( 689 res) bj00176 ( 689) 92 23.8 30 KIAA0928 ( 1922 res) hh16052 (1922) 100 25.2 31 KIAA1277 ( 1039 res) fj11251 (1039) 95 24.3 31 KIAA1568 ( 1380 res) fh22308 (1380) 97 24.7 32 KIAA0817 ( 2785 res) hg01392s2 (2785) 102 25.6 33 KIAA0642 ( 1329 res) hh02837 (1329) 96 24.5 34 KIAA1986 ( 334 res) pg00636 ( 334) 85 22.6 34 KIAA1598 ( 446 res) fj09914 ( 446) 87 22.9 35 KIAA0359 ( 760 res) hh00048 ( 760) 91 23.7 35 >>KIAA1098 ( 504 res) hk07318 (504 aa) initn: 239 init1: 200 opt: 200 Z-score: 160.1 bits: 38.2 E(): 0.001 Smith-Waterman score: 200; 26.957% identity (58.261% similar) in 115 aa overlap (126-240:67-181) 100 110 120 130 140 150 FLJ001 DEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQM ::: :. ..: : : :.:. . . KIAA10 DPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDRASPADLRTNHTLNNLVEKLLRE 40 50 60 70 80 90 160 170 180 190 200 210 FLJ001 HPTPGRGSRVTDQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYK . .: . . .: :. :.::: :.: .: :. . :. : : :......... KIAA10 EAEGARWTSYRFSRVCRLHRGQLSLFCLEDKELLCCSCQADPRHQGHRVQPVKDTAHDFR 100 110 120 130 140 150 220 230 240 250 FLJ001 AKLQGHVEPLRKHLEAVQKMKAKEERRVTELKVGECSRRG :: .. . ::.. .: :. . : KIAA10 AKCRNMEHALREKAKAFWAMRRSYEAIAKHNQVEAAWLEGRIRQEFDKLREFLRVEEQAI 160 170 180 190 200 210 >>KIAA0517 ( 792 res) hg00752 (792 aa) initn: 142 init1: 101 opt: 158 Z-score: 127.0 bits: 32.7 E(): 0.071 Smith-Waterman score: 191; 28.030% identity (65.152% similar) in 132 aa overlap (119-232:100-227) 90 100 110 120 130 140 FLJ001 LRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKS--FPRR---SFRPNL :: ..:: ::.. .:.. ... :. KIAA05 ICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQNNF 70 80 90 100 110 120 150 160 170 180 190 FLJ001 QLANMVQVIRQMHPTPGRGSR-------VTDQGI-----CPKHQ-EALKLFCEVDEEAIC ..:...:... ::: ... :: . ::.:. ......:. : :.: KIAA05 FITNLMDVLQR---TPGSNAEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETAMC 130 140 150 160 170 180 200 210 220 230 240 250 FLJ001 VVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKVGE : :.. : .: .:::..::...::.:: ... . :.: . KIAA05 RECTEGE-HAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQK 190 200 210 220 230 240 FLJ001 CSRRG KIAA05 ASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSNF 250 260 270 280 290 300 >>KIAA0898 ( 979 res) hk09541 (979 aa) initn: 90 init1: 90 opt: 152 Z-score: 121.4 bits: 32.0 E(): 0.15 Smith-Waterman score: 152; 22.951% identity (54.098% similar) in 122 aa overlap (127-247:66-187) 100 110 120 130 140 150 FLJ001 EEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMH ::.:: . : . ...: . .. KIAA08 KLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQ 40 50 60 70 80 90 160 170 180 190 200 210 FLJ001 PTPGRGSRVTDQGICPKHQEALKLFCEVDEEAICVVCRE-SRSHKQHSVVPLEEVVQEYK . ... : .:.: :..:: . .. :: : . : :. :: :. ... KIAA08 LCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHV 100 110 120 130 140 150 220 230 240 250 FLJ001 AKLQGHVEPLRKHLEAVQKMKAKEERRVTELKVGECSRRG .:.. .: ::..: . .. . :: : .. KIAA08 TKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNK 160 170 180 190 200 210 KIAA08 LITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFV 220 230 240 250 260 270 >>KIAA1113 ( 1131 res) hj06379(revised) (1131 aa) initn: 154 init1: 55 opt: 143 Z-score: 114.0 bits: 30.8 E(): 0.38 Smith-Waterman score: 143; 26.923% identity (56.154% similar) in 130 aa overlap (127-254:242-361) 100 110 120 130 140 150 FLJ001 EEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMH : : .. : .: . .... ... KIAA11 SSDEKSEQVCTSCEDNASAVGFCVECGEWLCKTCIEAHQRVKFTKD----HLIRKKEDVS 220 230 240 250 260 160 170 180 190 200 210 FLJ001 PTPG-RGSRVTDQGICPKH-QEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEY . : :.: . .:: : :: ::::::. .. : : . ::.: :::. :. KIAA11 ESVGASGQRPV---FCPVHKQEQLKLFCETCDRLTCRDC-QLLEHKEHRYQFLEEAFQNQ 270 280 290 300 310 320 220 230 240 250 FLJ001 KAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKVGECSRRG :. ... . : .. . :. .. . :. : :.: ..: KIAA11 KGAIENLLAKLLEKKNYVHFAATQVQNRIKE--VNETNKRVEQEIKVAIFTLINEINKKG 330 340 350 360 370 380 KIAA11 KSLLQQLENVTKERQMKLLQQQNDITGLSRQVKHVMNFTNWAIASGSSTALLYSKRLITF 390 400 410 420 430 440 >>KIAA0282 ( 711 res) ha06845s1 (711 aa) initn: 97 init1: 70 opt: 127 Z-score: 105.0 bits: 28.5 E(): 1.2 Smith-Waterman score: 127; 27.200% identity (55.200% similar) in 125 aa overlap (111-227:156-272) 90 100 110 120 130 FLJ001 LGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPP--PAPRR-CFTCPQCRKSF--- :.: : : :.:: :.:::::..:. KIAA02 GSYGGFASAPTTPCQKSPNGVRVFPPAMPPPATHLSPALAPVPRNSCITCPQCHRSLILD 130 140 150 160 170 180 140 150 160 170 180 190 FLJ001 PR--RSFRPNLQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVDEEAICVV : :.: : : .... .: .... . : .: : . ..:: . : KIAA02 DRGLRGFPKNRVLEGVIDRYQQ-----SKAAALKCQ-LCEKAPKEATVMCEQCDVFYCDP 190 200 210 220 230 200 210 220 230 240 250 FLJ001 CRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKVGECS :: : : .. . ...: ..... .. : :: KIAA02 CRL-RCHPPRGPLAKHRLVPPAQGRVSRRLSP-RKVSTCTDHELENHSMYCVQCKMPVCY 240 250 260 270 280 290 FLJ001 RRG KIAA02 QCLEEGKHSSHEVKALGAMWKLHKSQLSQALNGLSDRAKEAKEFLVQLRNMVQQIQENSV 300 310 320 330 340 350 >>KIAA0835 ( 1167 res) hj05861 (1167 aa) initn: 567 init1: 118 opt: 128 Z-score: 102.9 bits: 28.8 E(): 1.6 Smith-Waterman score: 132; 25.957% identity (51.915% similar) in 235 aa overlap (28-255:274-492) 10 20 30 40 50 FLJ001 DELDREEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEEEVEEEEEGVFWTSGMS : :..: . :.. :: . .:. KIAA08 LQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESS--KQKGIL 250 260 270 280 290 300 60 70 80 90 100 110 FLJ001 RSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPP .. . :::.:::: . . :::. . :.::.::: :: :::. : . . KIAA08 SHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQE 310 320 330 340 350 360 120 130 140 150 160 170 FLJ001 PPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIR---QMHPTPGRGSRVTDQGICPKH . :. : :. : :. . . .:.: . . : .: : :::.. . KIAA08 DTSHTSAQKAPELRG--PE-SPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDES---EM 370 380 390 400 410 180 190 200 210 220 230 FLJ001 QEAL-KLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQGHVEPLR--KHLEA :. . . . :.:: . .. :. . . : :. ..: : :: . : :.. KIAA08 QDMMTRGNLGLLEQAIALKAEQVRTVCEPGCPPAEQ------SQL-GLGEPGKAAKPLDT 420 430 440 450 460 240 250 FLJ001 VQK-MKAKEERRVTELKVGECSRRG :.: . .:. :. . .. .: : KIAA08 VRKSYYSKDPSRAEKREI-KCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRIPPEILAMHE 470 480 490 500 510 520 >>KIAA1835 ( 623 res) fh08795s1 (623 aa) initn: 179 init1: 100 opt: 122 Z-score: 102.2 bits: 27.8 E(): 1.7 Smith-Waterman score: 122; 51.163% identity (74.419% similar) in 43 aa overlap (69-111:395-434) 40 50 60 70 80 90 FLJ001 MEEEVEEEEEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEE ..:::::. . :. :::. . :.::::: KIAA18 NGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEE---GEEEEEEAEEEEEEDEE 370 380 390 400 410 420 100 110 120 130 140 150 FLJ001 EVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPT : :: :::. .: KIAA18 EEEEEEEEEEEEPQQRGQGEKSATPSRKILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK 430 440 450 460 470 480 >>KIAA1951 ( 679 res) fj05532 (679 aa) initn: 253 init1: 120 opt: 120 Z-score: 100.2 bits: 27.5 E(): 2.2 Smith-Waterman score: 130; 39.344% identity (47.541% similar) in 61 aa overlap (113-173:439-488) 90 100 110 120 130 140 FLJ001 DMEEEDLRGEDEEDEEEVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPN :: :::::: . :::: ::: : KIAA19 TKFLYHRRTHAGKSGAPPTGATAPPAPAEPTPPPPPPAPPAQLPCPQCSKSFASAS---- 410 420 430 440 450 460 150 160 170 180 190 200 FLJ001 LQLANMVQVIRQMHPTPGRGSRVTDQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQH . . : .: : : : :.: : KIAA19 ----RLSRHRRAVHGPPERRHRC---GVCGKGFKKLIHVRNHLRTHTGERPFQCHSCGKT 470 480 490 500 510 210 220 230 240 250 FLJ001 SVVPLEEVVQEYKAKLQGHVEPLRKHLEAVQKMKAKEERRVTELKVGECSRRG KIAA19 FASLANLSRHQLTHTGARPYQCLDCGKRFTQSSNLQQHRRLHLRPVAFARAPRLPITGLY 520 530 540 550 560 570 >>KIAA0007 ( 686 res) ha02056 (686 aa) initn: 161 init1: 88 opt: 117 Z-score: 98.0 bits: 27.1 E(): 2.9 Smith-Waterman score: 117; 51.111% identity (68.889% similar) in 45 aa overlap (67-110:607-651) 40 50 60 70 80 90 FLJ001 GDMEEEVEEEEEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEED :.:::. ::. : ..: . :: ::::. KIAA00 LHGKLILLITQVTASEKTKGATSPGQKAKLVYEEESSEEESDDEIADKDSEDNWDEDEEE 580 590 600 610 620 630 100 110 120 130 140 150 FLJ001 EE-EVLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQM : : :.::::: : KIAA00 SESEKDEDVEEEDEDAEGKDEENGEDRDTASEKELNGDSDLDPENESEEE 640 650 660 670 680 >>KIAA1231 ( 1061 res) fh08195s1 (1061 aa) initn: 322 init1: 98 opt: 120 Z-score: 97.6 bits: 27.7 E(): 3.1 Smith-Waterman score: 120; 37.705% identity (55.738% similar) in 61 aa overlap (72-130:32-92) 50 60 70 80 90 FLJ001 EVEEEEEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDME--EEDLRGEDEEDEEE : :. :: .: ::. . :::. ::. KIAA12 SAYSVPSTFAQASLPVHNQVLPSIESVDGSDPLATLQTPLGRLEAKEEEDEDEDEDTEED 10 20 30 40 50 60 100 110 120 130 140 150 FLJ001 VLEEVEEEDLDPVTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTP :. :. ::: : :: : . . : .: KIAA12 EEEDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHASVCPKHGPLHPIPNRPVLTRARAS 70 80 90 100 110 120 160 170 180 190 200 210 FLJ001 GRGSRVTDQGICPKHQEALKLFCEVDEEAICVVCRESRSHKQHSVVPLEEVVQEYKAKLQ KIAA12 LPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLDKGDRKERDL 130 140 150 160 170 180 255 residues in 1 query sequences 2210739 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:38:23 2009 done: Fri Feb 27 10:38:23 2009 Total Scan time: 0.420 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]