# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sg00019.fasta.huge -Q ../query/FLJ00350.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00350, 601 aa
vs ./tmplib.10216 library
2210393 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.4086+/-0.00346; mu= 23.9960+/- 0.235
mean_var=72.6357+/-15.849, 0's: 0 Z-trim: 4 B-trim: 0 in 0/40
Lambda= 0.150487
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
FLJ00135 ( 597 res) sh02493 ( 597) 3420 751.9 4.1e-218
FLJ00100 ( 672 res) as00100 ( 672) 104 32.0 0.23
KIAA1535 ( 711 res) fk12792 ( 711) 104 32.0 0.24
FLJ00010 ( 772 res) as00010 ( 772) 104 32.1 0.25
KIAA1687 ( 728 res) fh26020 ( 728) 88 28.6 2.7
KIAA1020 ( 638 res) fg00473s1 ( 638) 84 27.6 4.5
KIAA1028 ( 501 res) fh00176s1 ( 501) 83 27.2 4.7
KIAA1522 ( 1044 res) fh14706(revised) (1044) 84 28.0 5.8
KIAA1388 ( 599 res) fj06552 ( 599) 80 26.7 8
KIAA0498 ( 111 res) hg00157 ( 111) 74 24.2 8.3
KIAA1887 ( 967 res) fk02232 ( 967) 81 27.3 8.8
KIAA1532 ( 601 res) fg04455(revised) ( 601) 79 26.5 9.3
FLJ00155 ( 612 res) sh06465 ( 612) 79 26.5 9.4
KIAA1318 ( 1418 res) fh13683 (1418) 81 27.5 11
KIAA0541 ( 1500 res) fg05763 (1500) 80 27.4 13
FLJ00247 ( 925 res) sj08552 ( 925) 78 26.6 14
KIAA1998 ( 607 res) bf00063 ( 607) 76 25.9 15
KIAA0715 ( 1498 res) pf08610 (1498) 79 27.1 15
FLJ00193 ( 491 res) sj02629 ( 491) 75 25.5 15
KIAA0473 ( 937 res) hh00220 ( 937) 77 26.4 16
KIAA0015 ( 480 res) ha00478 ( 480) 74 25.3 18
KIAA1113 ( 1131 res) hj06379(revised) (1131) 76 26.3 20
KIAA1469 ( 662 res) fj01881 ( 662) 74 25.5 21
FLJ00165 ( 146 res) sh07210 ( 146) 68 23.1 24
KIAA0996 ( 869 res) hk07913 ( 869) 74 25.7 24
KIAA1960 ( 871 res) hk03842 ( 871) 74 25.7 24
KIAA0644 ( 887 res) hj03618 ( 887) 74 25.7 24
KIAA0400 ( 1022 res) hg01091 (1022) 74 25.8 26
KIAA0659 ( 1049 res) fh22726 (1049) 74 25.8 26
KIAA1364 ( 811 res) fj02442 ( 811) 73 25.4 27
FLJ00158 ( 308 res) sh06588 ( 308) 69 23.9 30
KIAA0604 ( 773 res) hg02198b ( 773) 72 25.2 30
KIAA0344 ( 2066 res) hg01568 (2066) 75 26.5 32
KIAA1234 ( 727 res) fh08618 ( 727) 71 24.9 34
KIAA2013 ( 730 res) bm04064 ( 730) 71 24.9 34
KIAA1691 ( 558 res) fj00597s1 ( 558) 70 24.5 35
KIAA0796 ( 1876 res) hk06116s1 (1876) 74 26.2 35
KIAA1862 ( 1070 res) aj00563 (1070) 72 25.4 36
KIAA1723 ( 1554 res) pf00881 (1554) 73 25.9 37
FLJ00190 ( 521 res) sj02368 ( 521) 69 24.2 39
KIAA1498 ( 1731 res) hh01611 (1731) 73 25.9 39
KIAA0671 ( 537 res) hk02368 ( 537) 69 24.3 39
KIAA1497 ( 730 res) hg01608 ( 730) 70 24.7 40
FLJ00064 ( 276 res) as00064 ( 276) 66 23.1 44
KIAA1845 ( 705 res) fg05317(revised) ( 705) 69 24.4 45
KIAA1565 ( 1313 res) bf00184 (1313) 71 25.3 46
KIAA0786 ( 1021 res) hk05490 (1021) 70 24.9 47
FLJ00263 ( 764 res) sj01530 ( 764) 69 24.5 47
KIAA1715 ( 429 res) hh02382 ( 429) 67 23.7 47
KIAA1620 ( 1398 res) hj04150 (1398) 71 25.4 48
>>FLJ00135 ( 597 res) sh02493 (597 aa)
initn: 3420 init1: 3420 opt: 3420 Z-score: 4009.1 bits: 751.9 E(): 4.1e-218
Smith-Waterman score: 3420; 99.613% identity (99.807% similar) in 517 aa overlap (1-517:1-517)
10 20 30 40 50 60
FLJ003 PFLCQVSRFLHTYSAATQDLQAKELHQLQNLFSKASADYQWLLQSPKGAEATLPTVIAEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 PFLCQVSRFLHTYSAATQDLQAKELHQLQNLFSKASADYQWLLQSPKGAEATLPTVIAEL
10 20 30 40 50 60
70 80 90 100 110 120
FLJ003 QQFLRGARAMCIESWARFSLVRMAGGTALLAASCFICLLASQWAISPGFPFCPLLLTPVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 QQFLRGARAMCIESWARFSLVRMAGGTALLAASCFICLLASQWAISPGFPFCPLLLTPVA
70 80 90 100 110 120
130 140 150 160 170 180
FLJ003 WGLVGAIAYAGLLGTIELKLDLVLLGAVAAVSSFLPFLWKAWAGWGSKRPLATLFPIPGP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 WGLVGAIAYAGLLGTIELKLDLVLLGAVAAVSSFLPFLWKAWAGWGSKRPLATLFPIPGP
130 140 150 160 170 180
190 200 210 220 230 240
FLJ003 VLLLLLFRLAVFFSDSFVVAEARATPFLLGSFILLLVVQLHWEGQLLPPKLLTMPRLGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 VLLLLLFRLAVFFSDSFVVAEARATPFLLGSFILLLVVQLHWEGQLLPPKLLTMPRLGTS
190 200 210 220 230 240
250 260 270 280 290 300
FLJ003 ATTNPPRHNGAYALRLGIGLLLCTRLAGLFHRCPEETPVCHSSPWLSPLASMVGGRAKNL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 ATTNPPRHNGAYALRLGIGLLLCTRLAGLFHRCPEETPVCHSSPWLSPLASMVGGRAKNL
250 260 270 280 290 300
310 320 330 340 350 360
FLJ003 WYGACVAALVALLAAVRLWLRRYGNLKSPEPPMLFVRWGLPLMALGTAAYWALASGADEA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 WYGACVAALVALLAAVRLWLRRYGNLKSPEPPMLFVRWGLPLMALGTAAYWALASGADEA
310 320 330 340 350 360
370 380 390 400 410 420
FLJ003 PPRLRVLVSGASMVLPRAVAGLAASGLALLLWKPVTVLVKAGAGAPRTRTVLTPFSGPPT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 PPRLRVLVSGASMVLPRAVAGLAASGLALLLWKPVTVLVKAGAGAPRTRTVLTPFSGPPT
370 380 390 400 410 420
430 440 450 460 470 480
FLJ003 SQADLDYVVPQIYRHMQEEFRGRLERTKSQGPLTVAAYQLGSVYSAAMVTALTLLAFPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 SQADLDYVVPQIYRHMQEEFRGRLERTKSQGPLTVAAYQLGSVYSAAMVTALTLLAFPLL
430 440 450 460 470 480
490 500 510 520 530 540
FLJ003 LLHAERISLVFLLLFLQSFLLLHLLAAGIPVTTPGKYLSSDSLKDNSDVSSAPLVFKEVL
::::::::::::::::::::::::::::::::::: .
FLJ001 LLHAERISLVFLLLFLQSFLLLHLLAAGIPVTTPGPFTVPWQAVSAWALMATQTFYSTGH
490 500 510 520 530 540
550 560 570 580 590 600
FLJ003 LLMFLSLTEGPMPHTTRKVFLVSSLLPAIAKQIDPSCWFPGFMERRDKESSKTPCGNAAS
FLJ001 QPVFPAIHWHAAFVGFPEGHGSCTWLPALLVGANTFASHLLFAGSRLPTAPALAFPV
550 560 570 580 590
>>FLJ00100 ( 672 res) as00100 (672 aa)
initn: 140 init1: 66 opt: 104 Z-score: 117.8 bits: 32.0 E(): 0.23
Smith-Waterman score: 104; 31.373% identity (51.961% similar) in 102 aa overlap (79-175:116-212)
50 60 70 80 90 100
FLJ003 AEATLPTVIAELQQFLRGARAMCIESWARFSLVRMAGGTALLAA----SCFICLLASQWA
:. . :.. .: : . : .:: .
FLJ001 LLQEDYGFFRAISLWPPLVLIGIYATALSASMSSLIGASRILHALARDDLFGVILAPAKV
90 100 110 120 130 140
110 120 130 140 150 160
FLJ003 IS-PGFPFCPLLLTPVAWGLVGAIAYAGLLGTIELKLDLVLLGAVAAVSSFLPFLWKAWA
.: : :. .: . :::: . :: :.:. . . : : :::. : : ::
FLJ001 VSRGGNPWAAVLYS---WGLVQLVLLAGKLNTLAAVVTVFYLVAYAAVD--LSCLSLEWA
150 160 170 180 190 200
170 180 190 200 210 220
FLJ003 GWGSKRPLATLFPIPGPVLLLLLFRLAVFFSDSFVVAEARATPFLLGSFILLLVVQLHWE
. . :: .::
FLJ001 SAPNFRPTFSLFSWHTCLLGVASCLLMMFLISPGAAGGSLLLMGLLAALLTARGGPSSWG
210 220 230 240 250 260
>>KIAA1535 ( 711 res) fk12792 (711 aa)
initn: 78 init1: 49 opt: 104 Z-score: 117.6 bits: 32.0 E(): 0.24
Smith-Waterman score: 104; 25.503% identity (52.349% similar) in 149 aa overlap (193-335:175-310)
170 180 190 200 210 220
FLJ003 AGWGSKRPLATLFPIPGPVLLLLLFRLAVFFSDSFVVAEARATPFLLGSFILLLVVQLHW
: .. .: : . : : ...::: ::
KIAA15 RIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLC---HW
150 160 170 180 190 200
230 240 250 260 270
FLJ003 EG--QLLPPKLLTMPRLGTSATTNPPRHN-G---AYALRLGIGLLLCTRLAGLFHRCPEE
.: :.: : : .: . .. :. : ..:: ... .:: . ..
KIAA15 DGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQYSHALFKAMSHMLCIGYG-------QQ
210 220 230 240 250
280 290 300 310 320 330
FLJ003 TPVCHSSPWLSPLASMVGGRAKNLWYGACVAALVALLAAVRLWLRRYGNLKSPEPPMLFV
.:: . ::. :. .::. .. : .: . .: .. : . ..: :. : : :
KIAA15 APVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKY---KQVEQYMSFH
260 270 280 290 300 310
340 350 360 370 380 390
FLJ003 RWGLPLMALGTAAYWALASGADEAPPRLRVLVSGASMVLPRAVAGLAASGLALLLWKPVT
KIAA15 KLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCRGLVAHMPLFAHADP
320 330 340 350 360 370
>>FLJ00010 ( 772 res) as00010 (772 aa)
initn: 104 init1: 66 opt: 104 Z-score: 117.3 bits: 32.1 E(): 0.25
Smith-Waterman score: 104; 31.373% identity (51.961% similar) in 102 aa overlap (79-175:216-312)
50 60 70 80 90 100
FLJ003 AEATLPTVIAELQQFLRGARAMCIESWARFSLVRMAGGTALLAA----SCFICLLASQWA
:. . :.. .: : . : .:: .
FLJ000 LLQEDYGFFRAISLWPPLVLIGIYATALSASMSSLIGASRILHALARDDLFGVILAPAKV
190 200 210 220 230 240
110 120 130 140 150 160
FLJ003 IS-PGFPFCPLLLTPVAWGLVGAIAYAGLLGTIELKLDLVLLGAVAAVSSFLPFLWKAWA
.: : :. .: . :::: . :: :.:. . . : : :::. : : ::
FLJ000 VSRGGNPWAAVLYS---WGLVQLVLLAGKLNTLAAVVTVFYLVAYAAVD--LSCLSLEWA
250 260 270 280 290 300
170 180 190 200 210 220
FLJ003 GWGSKRPLATLFPIPGPVLLLLLFRLAVFFSDSFVVAEARATPFLLGSFILLLVVQLHWE
. . :: .::
FLJ000 SAPNFRPTFSLFSWHTCLLGVASCLLMMFLISPGAAGGSLLLMGLLAALLTARGGPSSWG
310 320 330 340 350 360
>>KIAA1687 ( 728 res) fh26020 (728 aa)
initn: 98 init1: 46 opt: 88 Z-score: 98.7 bits: 28.6 E(): 2.7
Smith-Waterman score: 88; 29.412% identity (54.412% similar) in 68 aa overlap (324-384:510-577)
300 310 320 330 340
FLJ003 GGRAKNLWYGACVAALVALLAAVRLWLRRYGNLKSPEPPMLFVRWGL-------PLMALG
:.. . ::: : :: :..:.:
KIAA16 GVAVIDNKLYVVGGRDGLKTLNTVECFNPVGKIWTVMPPMSTHRHGLGVATLEGPMYAVG
480 490 500 510 520 530
350 360 370 380 390 400
FLJ003 TAAYWALASGADEAPPRLRVLVSGASMVLPRAVAGLAASGLALLLWKPVTVLVKAGAGAP
:. . ... :. : ::: ::...:..:
KIAA16 GHDGWSYLNTVERWDPEGRQWNYVASMSTPRSTVGVVALNNKLYAIGGRDGSSCLKSMEY
540 550 560 570 580 590
410 420 430 440 450 460
FLJ003 RTRTVLTPFSGPPTSQADLDYVVPQIYRHMQEEFRGRLERTKSQGPLTVAAYQLGSVYSA
KIAA16 FDPHTNKWSLCAPMSKRRGGVGVATYNGFLYVVGGHDAPASNHCSRLSDCVERYDPKGDS
600 610 620 630 640 650
>>KIAA1020 ( 638 res) fg00473s1 (638 aa)
initn: 94 init1: 70 opt: 84 Z-score: 94.6 bits: 27.6 E(): 4.5
Smith-Waterman score: 84; 37.288% identity (55.932% similar) in 59 aa overlap (145-201:19-76)
120 130 140 150 160 170
FLJ003 LLTPVAWGLVGAIAYAGLLGTIELKLDLVLLGAVAAVSSFLPFLWKAWAGWGSKRPLATL
:.:. ::. : . : :::: :. : :
KIAA10 PGIDAPPGRPRAQEAPPPLAAAHMVSGPLALRWCAWAGRGDMGPDMEL
10 20 30 40
180 190 200 210 220 230
FLJ003 FPIPGPVLLLLLF--RLAVFFSDSFVVAEARATPFLLGSFILLLVVQLHWEGQLLPPKLL
: . ::: : : :. : ....:
KIAA10 -PSHSKQLLLQLNQQRTKGFLCDVIIMVENSIFRAHKNVLAASSIYFKSLVLHDNLINLD
50 60 70 80 90 100
>>KIAA1028 ( 501 res) fh00176s1 (501 aa)
initn: 43 init1: 43 opt: 83 Z-score: 94.4 bits: 27.2 E(): 4.7
Smith-Waterman score: 83; 24.194% identity (52.419% similar) in 124 aa overlap (354-470:112-229)
330 340 350 360 370 380
FLJ003 GNLKSPEPPMLFVRWGLPLMALGTAAYWALASGADEAPPRL-RVLVSGASMVLPRAVAGL
:: :.. : .: : .:.. . . .. :
KIAA10 KVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL
90 100 110 120 130 140
390 400 410 420 430
FLJ003 AASGLALLLWKPVTVLVKAGAGAPRTRTVLTP------FSGPPTSQADLDYVVPQIYRHM
:. . ::...:: : : : :. .. :..: :::: :: .. .
KIAA10 HANWVLHRDLKPANILV-MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA
150 160 170 180 190 200
440 450 460 470 480 490
FLJ003 QEEFRGRLERTKSQGPLTVAAYQLGSVYSAAMVTALTLLAFPLLLLHAERISLVFLLLFL
: . : . ::. . . .: ... ...
KIAA10 PELLLGARHYTKA-----IDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF
210 220 230 240 250
500 510 520 530 540 550
FLJ003 QSFLLLHLLAAGIPVTTPGKYLSSDSLKDNSDVSSAPLVFKEVLLLMFLSLTEGPMPHTT
KIAA10 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLL
260 270 280 290 300 310
>>KIAA1522 ( 1044 res) fh14706(revised) (1044 aa)
initn: 72 init1: 43 opt: 84 Z-score: 92.6 bits: 28.0 E(): 5.8
Smith-Waterman score: 84; 26.891% identity (43.697% similar) in 119 aa overlap (324-440:494-608)
300 310 320 330 340 350
FLJ003 GGRAKNLWYGACVAALVALLAAVRLWLRRYGNLKSPEPPMLFVRWGLPLMALGTAAYWAL
: .: :: : .: .. : .
KIAA15 VPDGPLGLPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSW-VPGLSPGGSRRPPR
470 480 490 500 510 520
360 370 380 390 400 410
FLJ003 ASGADEAPPRLRVLVSGASMVLPRAVAGLAASGLALLLWKP--VTVLVKAGAGAPRTRTV
. .: ::. . :...:: :: :: :: : . ::.. . :
KIAA15 SPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPERVTSLRSPGASVSSSLTS
530 540 550 560 570 580
420 430 440 450 460 470
FLJ003 LTPFSGPPTSQADLDYVVPQIYRHMQEEFRGRLERTKSQGPLTVAAYQLGSVYSAAMVTA
: :. : : : ::: . ..:
KIAA15 LCSSSSDP---APSDRSGPQILTPLGDRFVIPPHPKVPAPFSPPPSKPRSPNPAAPALAA
590 600 610 620 630
>>KIAA1388 ( 599 res) fj06552 (599 aa)
initn: 69 init1: 69 opt: 80 Z-score: 90.1 bits: 26.7 E(): 8
Smith-Waterman score: 80; 26.154% identity (55.385% similar) in 65 aa overlap (380-441:172-236)
350 360 370 380 390 400
FLJ003 YWALASGADEAPPRLRVLVSGASMVLPRAVAGLAASGLALLLWKPVTVLVKAGAGAPRTR
.::. .. .::. . : ..::
KIAA13 VQAEQKPFVCGVCKMGFSLLTSLAQHHSSHSGLVKCSICEKTYKPAEAAEPATTAAPSLP
150 160 170 180 190 200
410 420 430 440 450 460
FLJ003 TVLTPFSGPPTSQADLDYVVP---QIYRHMQEEFRGRLERTKSQGPLTVAAYQLGSVYSA
.. .: . :. ::: : : . ..:..: :
KIAA13 AAPAPSTVTPAEQADKPYSCPICQKPFKHLSELSRHERIHTGEKPYKCTLCDKSFSQSSH
210 220 230 240 250 260
470 480 490 500 510 520
FLJ003 AMVTALTLLAFPLLLLHAERISLVFLLLFLQSFLLLHLLAAGIPVTTPGKYLSSDSLKDN
KIAA13 LVHHKRTHSSERPYKCAVCEKTFKHRSHLVRHMYAHSGEHHLFRCNVCELHFKESSELLQ
270 280 290 300 310 320
>>KIAA0498 ( 111 res) hg00157 (111 aa)
initn: 32 init1: 32 opt: 74 Z-score: 89.8 bits: 24.2 E(): 8.3
Smith-Waterman score: 92; 28.000% identity (54.667% similar) in 75 aa overlap (106-178:17-90)
80 90 100 110 120 130
FLJ003 ARFSLVRMAGGTALLAASCFICLLASQWAISPGFPFCPLLLTPVAWGLVGAIAYAGLLGT
: :.: :: : .: :.: . ::.:.
KIAA04 REGVLMVGFQACDTHPSSGMPSCPPH-QPGGWKLLGKETGQGLVGS
10 20 30 40
140 150 160 170 180 190
FLJ003 IELKLDLVLLGAVAAVSSFLPFLWKA--WAGWGSKRPLATLFPIPGPVLLLLLFRLAVFF
. . : .. . ...::. .. : : : .: .. : :
KIAA04 LFGFIGLQIFTVQELKGDILPLSSSGSPWFGCGESRSVSLQSPSPLQPGLWVPAWSLQPL
50 60 70 80 90 100
200 210 220 230 240 250
FLJ003 SDSFVVAEARATPFLLGSFILLLVVQLHWEGQLLPPKLLTMPRLGTSATTNPPRHNGAYA
KIAA04 RVHILH
110
601 residues in 1 query sequences
2210393 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 11:01:39 2009 done: Fri Feb 27 11:01:39 2009
Total Scan time: 0.640 Total Display time: 0.090
Function used was FASTA [version 34.26.5 April 26, 2007]