# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sg00017.fasta.huge -Q ../query/FLJ00415.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00415, 426 aa vs ./tmplib.10216 library 2210568 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.2327+/-0.00368; mu= 17.2903+/- 0.249 mean_var=77.7991+/-16.939, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.145408 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00033 ( 253 res) as00033 ( 253) 1576 339.6 1.5e-94 KIAA1203 ( 727 res) fg03361 ( 727) 95 29.5 0.99 KIAA0559 ( 1212 res) hh01510 (1212) 94 29.6 1.6 KIAA1036 ( 380 res) fh01447 ( 380) 86 27.3 2.4 KIAA1250 ( 1777 res) pf01137 (1777) 91 29.2 3.1 KIAA0298 ( 901 res) hf00341(revised) ( 901) 87 28.0 3.6 KIAA0912 ( 1300 res) hk03560(revised) (1300) 88 28.4 3.9 KIAA0830 ( 523 res) hj04436 ( 523) 82 26.6 5.3 KIAA1816 ( 1162 res) fh16716 (1162) 85 27.7 5.6 KIAA1393 ( 500 res) hj06562 ( 500) 77 25.5 11 KIAA1177 ( 755 res) hf00837a ( 755) 78 26.0 12 KIAA0249 ( 902 res) ha07006 ( 902) 78 26.1 13 KIAA1187 ( 813 res) fk03027 ( 813) 77 25.8 14 KIAA0075 ( 174 res) ha01209 ( 174) 70 23.5 15 KIAA1731 ( 2056 res) bf02656 (2056) 80 27.0 17 KIAA0190 ( 813 res) ha03225 ( 813) 76 25.6 17 KIAA0342 ( 2467 res) bf03307 (2467) 80 27.1 19 KIAA1089 ( 1033 res) ha02541 (1033) 76 25.7 19 KIAA0385 ( 1380 res) hh00802 (1380) 77 26.1 20 KIAA1636 ( 1864 res) ff02660 (1864) 78 26.5 21 KIAA0682 ( 973 res) hk02879 ( 973) 75 25.5 22 KIAA0977 ( 1207 res) hj07018 (1207) 75 25.6 25 KIAA1053 ( 508 res) hh05049 ( 508) 71 24.3 26 KIAA0242 ( 529 res) ha03111(revised) ( 529) 71 24.3 26 KIAA0571 ( 683 res) hh02388 ( 683) 72 24.7 27 KIAA1965 ( 565 res) pj02601 ( 565) 71 24.4 27 KIAA1162 ( 115 res) hj05107 ( 115) 64 22.0 29 KIAA1924 ( 613 res) hh01339 ( 613) 71 24.4 29 KIAA1359 ( 517 res) fj02042 ( 517) 70 24.1 30 KIAA0119 ( 325 res) ha01753 ( 325) 68 23.4 30 KIAA1019 ( 2309 res) fg00188s1 (2309) 76 26.2 32 FLJ00028 ( 91 res) as00028 ( 91) 62 21.4 33 KIAA1097 ( 980 res) hk07058 ( 980) 72 24.9 33 KIAA0995 ( 1014 res) hk07740 (1014) 72 24.9 34 KIAA0432 ( 827 res) hh01859s1 ( 827) 71 24.6 35 KIAA1005 ( 1055 res) hk10066 (1055) 72 24.9 35 KIAA0457 ( 845 res) hg00693 ( 845) 71 24.6 35 KIAA0721 ( 433 res) hk01908 ( 433) 68 23.6 36 KIAA0987 ( 1115 res) hk01713 (1115) 72 24.9 36 KIAA0193 ( 443 res) bh00167 ( 443) 68 23.6 37 KIAA0960 ( 1502 res) hj05779s1 (1502) 73 25.3 37 KIAA0272 ( 759 res) ha06802s1 ( 759) 70 24.3 38 KIAA0483 ( 299 res) hj00879 ( 299) 66 22.9 38 KIAA0945 ( 797 res) hj04760 ( 797) 70 24.3 39 KIAA1540 ( 424 res) fj00652 ( 424) 67 23.4 41 KIAA0543 ( 1111 res) hg04390 (1111) 71 24.7 42 KIAA0381 ( 1114 res) ah04695 (1114) 71 24.7 42 KIAA1092 ( 1154 res) hk04417 (1154) 71 24.7 43 KIAA0301 ( 3210 res) hf00402s1 (3210) 75 26.2 45 KIAA1356 ( 519 res) fj01605 ( 519) 67 23.5 47 >>FLJ00033 ( 253 res) as00033 (253 aa) initn: 1573 init1: 1573 opt: 1576 Z-score: 1790.6 bits: 339.6 E(): 1.5e-94 Smith-Waterman score: 1576; 97.046% identity (98.312% similar) in 237 aa overlap (136-372:12-248) 110 120 130 140 150 160 FLJ004 ALDLTYPITSMFSGAGFNSSIFSVFKDQQIEDLWIPYFAITTDITASAMRVHTDGSLWRY .::::::::::::::::::::::::::::: FLJ000 WERAHLSPVRPQDLWIPYFAITTDITASAMRVHTDGSLWRY 10 20 30 40 170 180 190 200 210 220 FLJ004 VRASMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 VRASMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTN 50 60 70 80 90 100 230 240 250 260 270 280 FLJ004 YGDALSGWWLLWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 YGDALSGWWLLWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPID 110 120 130 140 150 160 290 300 310 320 330 340 FLJ004 SYSTLDFGKFNEICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 SYSTLDFGKFNEICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASF 170 180 190 200 210 220 350 360 370 380 390 400 FLJ004 TDLAEIVSRIEPAKPAMVDDESDYQTEYEEELLDVPRDAYADFQSTSAQQGSDLEDESSL ::::::::::::::::::: : .:. FLJ000 TDLAEIVSRIEPAKPAMVDGEWRRKTKPWRRA 230 240 250 >>KIAA1203 ( 727 res) fg03361 (727 aa) initn: 84 init1: 57 opt: 95 Z-score: 106.5 bits: 29.5 E(): 0.99 Smith-Waterman score: 95; 22.388% identity (55.224% similar) in 134 aa overlap (293-425:356-480) 270 280 290 300 310 320 FLJ004 CCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKFNEICEVGYQHGRTVFDIWGRSGVLEKM : :.. ...: : : : : KIAA12 DESDTRRLNSSVVDTQSKHSAQGDRLPPLSGPFDNNNQIAYVDQSDSVD---SSPVKEVK 330 340 350 360 370 380 330 340 350 360 370 380 FLJ004 LRDQQGP-SKKPASAVLTCPNASFTDLAEIVSRIEPAKPAMVDDESDYQTEYEEELLDVP .. : .::: :.. :... :. : . .. ..::....::. .. . : KIAA12 APSHPGSLAKKPESTTKRSPSSKGTSEPE--KSLRKGRPALASQESSLSSTSP----SSP 390 400 410 420 430 390 400 410 420 FLJ004 RDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKLSEGSSDQDG . .... . ... .: ...: :: :. : :: . ..:: KIAA12 LPVKVSLKPSRSRSKADSSSRGSGRHSSPAPAQPKKESSPKSQDSVSSPSPQKQKSASAL 440 450 460 470 480 490 KIAA12 TYTASSTSAKKASGPATRSPFPPGKSRTSDHSLSREGSRQSLGSDRASATSTSKPNSPRV 500 510 520 530 540 550 >>KIAA0559 ( 1212 res) hh01510 (1212 aa) initn: 98 init1: 43 opt: 94 Z-score: 102.9 bits: 29.6 E(): 1.6 Smith-Waterman score: 94; 24.828% identity (58.621% similar) in 145 aa overlap (205-337:807-939) 180 190 200 210 220 230 FLJ004 YMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYGDALSGWW .:: .. . :: ..: : . : KIAA05 TRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQT-----GKLMEGMQ 780 790 800 810 820 830 240 250 260 270 280 FLJ004 LLWKRWN--PLATKV--KVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLR---PP--ID .: .:: ::..:. .: .. :. : .: .:.....:. ..:. :: .: KIAA05 VL--EWNGIPLTSKTYEEVQSIISQQSGEAEICVRLDLNMLSDSENSQHLELHEPPKAVD 840 850 860 870 880 290 300 310 320 330 340 FLJ004 SYST--LDFGKFN-EICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPN . .. .: .. :. .:. :.. :. :.:.:: . ..::.. .:.: KIAA05 KAKSPGVDPKQLAAELQKVSLQQSPLVL-----SSVVEKGSHVHSGPTSAGSSSVPSPGQ 890 900 910 920 930 940 350 360 370 380 390 400 FLJ004 ASFTDLAEIVSRIEPAKPAMVDDESDYQTEYEEELLDVPRDAYADFQSTSAQQGSDLEDE KIAA05 PGSPSVSKKKHGSSKPTDGTKVVSHPITGEIQLQINYDLGNLIIHILQARNLVPRDNNGY 950 960 970 980 990 1000 >>KIAA1036 ( 380 res) fh01447 (380 aa) initn: 83 init1: 56 opt: 86 Z-score: 99.4 bits: 27.3 E(): 2.4 Smith-Waterman score: 86; 21.649% identity (53.608% similar) in 194 aa overlap (238-424:160-341) 210 220 230 240 250 260 FLJ004 KVVIAIDVGSRDETDLTNYGDALSGWWLLWKRWNPLATKVKVLNMAEIQTRLAY-VCCVR :. ::. ....:. .:. : . :.. KIAA10 STPVPERLEAVQRYIRELQYNHTGTQFFEIKKSRPLTG---LMDLAKEMTKEALPIKCLE 130 140 150 160 170 180 270 280 290 300 310 320 FLJ004 Q--LEVVKSSDYCEYLRPPIDSYSTLDFGKFNEICEVGYQHGRTVFDIWGRSGVLEKMLR : . .... : :: :..: :.. ..: .. :: :.: : : KIAA10 AVILGIYLTNSMPTLERFPI-SFKTYFSGNY-------FRHIVLGVNFAGRYGAL-GMSR 190 200 210 220 230 330 340 350 360 370 380 FLJ004 DQQGPSKKPA----SAVLTCPNASFTDLAEIVSRIEPAKPAMVDDESDYQTEYEEELLDV .. : :: : .. .:.. ....... .. . : .: : :... .::: KIAA10 REDLMYKPPAFRTLSELVLDFEAAYGRCWHVLKKVKLGQSVSHDPHSVEQIEWKHSVLDV 240 250 260 270 280 290 390 400 410 420 FLJ004 PRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKLSEGSSDQDG : . ::.. ... :.. . . :: . . .. :: : KIAA10 ERLGRDDFRKELERHARDMRLKIGKGTGPPSPTKDRKKDVSSPQRAQSSPHRRNSRSERR 300 310 320 330 340 350 KIAA10 PSGDKKTSEPKAMPDLNGYQIRV 360 370 380 >>KIAA1250 ( 1777 res) pf01137 (1777 aa) initn: 45 init1: 45 opt: 91 Z-score: 97.7 bits: 29.2 E(): 3.1 Smith-Waterman score: 91; 23.005% identity (51.174% similar) in 213 aa overlap (32-230:242-444) 10 20 30 40 50 60 FLJ004 LLPQVEMYKHVFQRPPDRHSDFSRLARVLTGNAIALVLGGGGARGCAQVGVLKALAECGI ::. .. . : .: .: : . .: KIAA12 ALIVAVKGGYTQSVKEILKRNPNVNLTDKDGNTALMIASKEGHTEIVQ-DLLDAGTYVNI 220 230 240 250 260 270 70 80 90 100 FLJ004 PVDMVGGTS-IGAFVGA----LYSEERNYSQMRIRAKQ------WA--EGMTSLMKAALD : : : : ::: :. . . ..:... ::... :: .: ..... :. KIAA12 P-DRSGDTVLIGAVRGGHVEIVRALLQKYADIDIRGQDNKTALYWAVEKGNATMVRDILQ 280 290 300 310 320 110 120 130 140 150 160 FLJ004 LTYPITSMFSGAGFNSSIFSVFKDQQIEDLWIPYFAITTDITASAMRVHTDGSLWRYVRA . : : . . : . : : ..... . . . .::. . : : .:. KIAA12 CN-PDTEICTKDGETPLI----KATKMRNIEVVELLLDKGAKVSAVDKKGDTPLHIAIRG 330 340 350 360 370 380 170 180 190 200 210 220 FLJ004 -SMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYG : .:. . : .::::.::. . .. : .. : ... : :.: . . : KIAA12 RSRKLAELL--LRNPKDGRLLYRPNKAGETPYNIDCSHQKSILTQI-FGARHLSPTETDG 390 400 410 420 430 440 230 240 250 260 270 280 FLJ004 DALSGWWLLWKRWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSY : : KIAA12 DMLGYDLYSSALADILSEPTMQPPICVGLYAQWGSGKSFLLKKLEDEMKTFAGQQIEPLF 450 460 470 480 490 500 >>KIAA0298 ( 901 res) hf00341(revised) (901 aa) initn: 69 init1: 46 opt: 87 Z-score: 96.4 bits: 28.0 E(): 3.6 Smith-Waterman score: 87; 23.973% identity (50.685% similar) in 146 aa overlap (282-422:642-777) 260 270 280 290 300 310 FLJ004 MAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKFNEICEVGYQHGRTVFD ::.: ::.. .. : . .:. : .. KIAA02 SQGSKPALPLDKNTAAALPQASGEETPLSVPPVD--STIQHSSPNVV----RKHS-TSLS 620 630 640 650 660 320 330 340 350 360 370 FLJ004 IWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASFTDLAEIVSRIEPAKPAMVDDESDYQT : : :..:: : . . ..: . . . . : . : : ::.. .. :. KIAA02 IMGFSNTLEMELSSTR--LERPLEPQIQSVSNLTAGAPQAVPSLLSAPPKMVSSLTSVQN 670 680 690 700 710 720 380 390 400 410 420 FLJ004 EY-----EEELLDVPRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKLSEGSSDQDG . .: :: ... ::: ... . .:: ::. : :.: : . KIAA02 QAMPSLTTSHLQTVPSLVHSTFQSMPNLISDSPQAMASLASDHPQ-AGPSLMSGHTQAVP 730 740 750 760 770 780 KIAA02 SLATCPLQSIPPVSDMQPETGSSSSSGRTSGSLCPRDGADPSLENALCKVSPGEMLSKLP 790 800 810 820 830 840 >>KIAA0912 ( 1300 res) hk03560(revised) (1300 aa) initn: 42 init1: 42 opt: 88 Z-score: 95.8 bits: 28.4 E(): 3.9 Smith-Waterman score: 88; 40.816% identity (61.224% similar) in 49 aa overlap (365-410:45-93) 340 350 360 370 380 390 FLJ004 SAVLTCPNASFTDLAEIVSRIEPAKPAMVDDESDYQTEYE-EELL-DVPRDAYADFQSTS :: ::. : : ..:: :.:.: : :. KIAA09 RGNSLRGLRRTMSLDFGSVALPVQNEDEEYDEEDYEREKELQQLLTDLPHDMLDDDLSSP 20 30 40 50 60 70 400 410 420 FLJ004 AQQGSDL-EDESSLRHRHPSLAFPKLSEGSSDQDG : :: :: .. . .:: KIAA09 ELQYSDCSEDGTDGQPHHPEQLEMSWNEQMLPKSQSVNGPSCQGLEPYNKVTYKPYQSSA 80 90 100 110 120 130 >>KIAA0830 ( 523 res) hj04436 (523 aa) initn: 56 init1: 56 opt: 82 Z-score: 93.3 bits: 26.6 E(): 5.3 Smith-Waterman score: 82; 25.676% identity (63.514% similar) in 74 aa overlap (352-422:277-348) 330 340 350 360 370 FLJ004 MLRDQQGPSKKPASAVLTCPNASFTDLAEIVSRIEPAKPAMVDD---ESDYQTEYEEELL .... : .: . .. :.. .:: ...: KIAA08 CCAVPGGGWAMGFVKHTRDSDIIEDVMVKDLQKLLPFNPQLFQNNCGETEQDTEKMKKIL 250 260 270 280 290 300 380 390 400 410 420 FLJ004 DVPRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKLSEGSSDQDG .: . . . ...:..:. :: : .. .: :. ::::: KIAA08 EVVNQIQDEERMVQSQKSSS--PLSSTRSKRSTLLPPEASEGSSSFLGKLMGFIATPFIK 310 320 330 340 350 360 KIAA08 LFQLIYYLVVAILKNIVYFLWCVTKQVINGIESCLYRLGSATISYFMAIGEELVSIPWKV 370 380 390 400 410 420 >>KIAA1816 ( 1162 res) fh16716 (1162 aa) initn: 59 init1: 59 opt: 85 Z-score: 92.9 bits: 27.7 E(): 5.6 Smith-Waterman score: 85; 25.773% identity (53.608% similar) in 97 aa overlap (328-424:84-178) 300 310 320 330 340 350 FLJ004 ICEVGYQHGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASFTDLAEIVSRIEP : : :... . :. : : . .. .::: KIAA18 SLGGAGIGVNNTPNSTPAAPSSNHPAAGGCGGSGGPGGGSAAVPKHS-TVVERLRQRIEG 60 70 80 90 100 110 360 370 380 390 400 410 FLJ004 AKPAMVDDESDYQTEYEEELLDVPRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKL . :. :. :: :.: ::. . .: : :... .. ...::: KIAA18 CRRHHVNCENRYQQAQVEQLELERRDTVSLYQRTLEQRAKK-SGAGTGKQQHPSKPQQDA 120 130 140 150 160 170 420 FLJ004 SEGSSDQDG .:..: KIAA18 EAASAEQRNHTLIMLQETVKRKLEGARSPLNGDQQNGACDGNFSPTSKRIRKDISAGMEA 180 190 200 210 220 230 >>KIAA1393 ( 500 res) hj06562 (500 aa) initn: 43 init1: 43 opt: 77 Z-score: 87.9 bits: 25.5 E(): 11 Smith-Waterman score: 77; 35.088% identity (64.912% similar) in 57 aa overlap (198-252:289-345) 170 180 190 200 210 220 FLJ004 ASMSLSGYMPPLCDPKDGHLLMDGGYINNLPADVARSMGAKV-VIAIDVGSRDETDLTNY :.:: .. : : .:: :.... : ..: KIAA13 NNYTYEFDFSKVYWNPRLSTEHSRITELLKPGDVLFDVFAGVGPFAIPVAKKNCTVFAND 260 270 280 290 300 310 230 240 250 260 270 280 FLJ004 GDALSGWWLLWK-RWNPLATKVKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPID . : :::.. . : . ::::.:. KIAA13 LNPESHKWLLYNCKLNKVDQKVKVFNLDGKDFLQGPVKEELMQLLGLSKERKPSVHVVMN 320 330 340 350 360 370 426 residues in 1 query sequences 2210568 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:03:16 2009 done: Fri Feb 27 11:03:17 2009 Total Scan time: 0.530 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]