hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/shimazu/full/sg/sg00016/interpro/cnk_1/seq.in
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Query:  sg00016  1129

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PLCXc    Phospholipase C, catalytic domain (part); do   264.5    8.1e-75   1
PLCYc    Phospholipase C, catalytic domain (part); do   198.4    6.4e-55   1
C2       Protein kinase C conserved region 2 (CalB)      86.4    3.4e-21   1
EFh      EF-hand, calcium binding motif                  47.3      2e-09   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
EFh        1/2      91   119 ..     1    29 []    26.1   0.0047
EFh        2/2     127   156 ..     1    29 []    21.4     0.13
PLCXc      1/1     244   389 ..     1   182 []   264.5  8.1e-75
PLCYc      1/1     544   658 ..     1   119 []   198.4  6.4e-55
C2         1/1     677   785 ..     1    92 []    86.4  3.4e-21

Alignments of top-scoring domains:
EFh: domain 1 of 2, from 91 to 119: score 26.1, E = 0.0047
                   *->elkeaFrefDkDgdGkIdfeEfkallksl<-*
                       lk+ F+e+Dk+gdG ++  E ++ll++l   
     sg00016    91    WLKQTFDEADKNGDGSLSIGEVLQLLHKL    119  

EFh: domain 2 of 2, from 127 to 156: score 21.4, E = 0.13
                   *->elkeaFrefDkD.gdGkIdfeEfkallksl<-*
                       +k++Fre+D+D++ G++ feEf+a+ k++   
     sg00016   127    RVKQMFREADTDdHQGTLGFEEFCAFYKMM    156  

PLCXc: domain 1 of 1, from 244 to 389: score 264.5, E = 8.1e-75
                   *->qDmdkPLshYfInsSHNsGtfkidiFPFGLDAPEKLRLPPYVTFLLR
                      qDm++PLshYfI sSHN                              
     sg00016   244    QDMTQPLSHYFITSSHN------------------------------ 260  

                   FTYLtgkQlwgessvegYiqaLkaGcRcvELDcwdgpdgePviyHGhTft
                    TYL g+Ql + s v +Y  +L+aGcRcvE DcwdgpdgeP+++HG+T+t
     sg00016   261 -TYLVGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPIVHHGYTLT 309  

                   skikLsdVleaIKkfAFvtSpyPEFvIlSLenHcspdqQakmaqmfkeiF
                   ski ++dV+e+I+k+AF++ +yP  vIlS+enHcs+ qQ+kmaq+++ i+
     sg00016   310 SKILFKDVIETINKYAFIKNEYP--VILSIENHCSVIQQKKMAQYLTDIL 357  

                   gdlLytkPltsseeypgsnLPsPeqLkgKILLkgK<-*
                   gd+L   +l s+++++   LPsP++LkgKIL+kgK   
     sg00016   358 GDKL---DLSSVSSEDATTLPSPQMLKGKILVKGK    389  

PLCYc: domain 1 of 1, from 544 to 658: score 198.4, E = 6.4e-55
                   *->lseLvsycapvkFrsfelaeekdnafyemsSfsEtkaakkllekapt
                      ls+Lv y ++v  + +e +  +   ++++sSfsEtk a ++l+++p+
     sg00016   544    LSDLVKYTKSVATHDIEMEAAS---SWQVSSFSETK-AHQILQQKPA 586  

                   dfvryNqrqLsRvYPkGtRvDSSNYnPqvfWnaGcQMVALNfQTpDkaMq
                   + +r+Nq+qLsR+YP+  RvDSSNYnPq+fWnaGcQMVALN+Q  ++++q
     sg00016   587 QYLRFNQQQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGRMLQ 636  

                   lNqGmFraNGgCGYVLKPefLR<-*
                   lN ++F+aNGgCGYVLKP ++    
     sg00016   637 LNRAKFSANGGCGYVLKPGCMC    658  

C2: domain 1 of 1, from 677 to 785: score 86.4, E = 3.4e-21
                   *->tLtvkiisArnLp..............DPYVkvs...........kT
                      +L ++iis+++Lp+++++  ++++   DP+V+v+  + + + ++ +T
     sg00016   677    QLVLRIISGQQLPkprdsmlgdrgeiiDPFVEVEiiglpvdcsreQT 723  

                   kvvkktlsgfNPvWnEesetFeFevpp...s.LeieVyDk.....dfiGr
                   +vv +++  fNP+W+E   t++F v+ ++ + +++ V+D+++ ++dfiG+
     sg00016   724 RVVDDNG--FNPTWEE---TLVFMVHMpeiAlVRFLVWDHdpigrDFIGQ 768  

                   vtippnnahqhsadglihlsell.ggrh.kl<-*
                    t+               +s++++g+rh  l   
     sg00016   769 RTLA--------------FSSMMpGYRHvYL    785  

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