# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sg00013.fasta.nr -Q ../query/FLJ00413.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00413, 308 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7824909 sequences
Expectation_n fit: rho(ln(x))= 5.1663+/-0.00018; mu= 10.0515+/- 0.010
mean_var=68.5860+/-13.429, 0's: 37 Z-trim: 52 B-trim: 0 in 0/66
Lambda= 0.154866
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|28273132|dbj|BAC56929.1| FLJ00413 protein [Homo ( 308) 2114 480.8 1.3e-133
gi|119578362|gb|EAW57958.1| histone deacetylase 7A ( 398) 2072 471.5 1.1e-130
gi|109099450|ref|XP_001110599.1| PREDICTED: simila ( 496) 1982 451.5 1.5e-124
gi|168177301|pdb|3C0Y|A Chain A, Crystal Structure ( 423) 1850 421.9 9.9e-116
gi|193785883|dbj|BAG54670.1| unnamed protein produ ( 425) 1850 421.9 9.9e-116
gi|119578358|gb|EAW57954.1| histone deacetylase 7A ( 480) 1850 422.0 1.1e-115
gi|211826359|gb|AAH06453.2| HDAC7 protein [Homo sa ( 530) 1850 422.0 1.2e-115
gi|32879885|gb|AAP88773.1| histone deacetylase 7A ( 614) 1850 422.0 1.3e-115
gi|119578359|gb|EAW57955.1| histone deacetylase 7A ( 700) 1850 422.1 1.5e-115
gi|34782905|gb|AAH20505.2| HDAC7 protein [Homo sap ( 711) 1850 422.1 1.5e-115
gi|5911907|emb|CAB55935.1| hypothetical protein [H ( 878) 1850 422.1 1.8e-115
gi|32482808|gb|AAP84704.1| histone deacetylase 7A ( 915) 1850 422.2 1.8e-115
gi|30913097|sp|Q8WUI4.2|HDAC7_HUMAN RecName: Full= ( 952) 1850 422.2 1.9e-115
gi|40675316|gb|AAH64840.1| HDAC7 protein [Homo sap ( 954) 1850 422.2 1.9e-115
gi|119578360|gb|EAW57956.1| histone deacetylase 7A ( 974) 1850 422.2 1.9e-115
gi|194382694|dbj|BAG64517.1| unnamed protein produ ( 974) 1850 422.2 1.9e-115
gi|33415445|gb|AAQ18232.1| histone deacetylase [Ho ( 991) 1850 422.2 1.9e-115
gi|114645025|ref|XP_522368.2| PREDICTED: similar t (1190) 1850 422.2 2.3e-115
gi|10440452|dbj|BAB15759.1| FLJ00062 protein [Homo ( 484) 1844 420.6 2.8e-115
gi|7022290|dbj|BAA91545.1| unnamed protein product ( 614) 1842 420.3 4.6e-115
gi|194376962|dbj|BAG63042.1| unnamed protein produ (1014) 1843 420.6 5.9e-115
gi|194211882|ref|XP_001490035.2| PREDICTED: simila ( 989) 1834 418.6 2.3e-114
gi|73996684|ref|XP_863877.1| PREDICTED: similar to ( 901) 1828 417.2 5.4e-114
gi|73996686|ref|XP_543715.2| PREDICTED: similar to ( 962) 1828 417.3 5.7e-114
gi|194667092|ref|XP_874443.3| PREDICTED: similar t (1037) 1820 415.5 2.1e-113
gi|74226851|dbj|BAE27070.1| unnamed protein produc ( 527) 1805 411.9 1.2e-112
gi|149267120|ref|XP_001478373.1| PREDICTED: hypoth ( 851) 1805 412.1 1.8e-112
gi|47847402|dbj|BAD21373.1| mFLJ00062 protein [Mus ( 852) 1805 412.1 1.8e-112
gi|149267118|ref|XP_001478363.1| PREDICTED: hypoth ( 892) 1805 412.1 1.9e-112
gi|148672273|gb|EDL04220.1| histone deacetylase 7A ( 908) 1805 412.1 1.9e-112
gi|26354072|dbj|BAC40666.1| unnamed protein produc ( 916) 1805 412.1 1.9e-112
gi|148672275|gb|EDL04222.1| histone deacetylase 7A ( 932) 1805 412.1 2e-112
gi|30913081|sp|Q8C2B3.2|HDAC7_MOUSE RecName: Full= ( 938) 1805 412.1 2e-112
gi|26336342|dbj|BAC31856.1| unnamed protein produc ( 944) 1805 412.1 2e-112
gi|149267114|ref|XP_001478340.1| PREDICTED: hypoth ( 946) 1805 412.1 2e-112
gi|26326835|dbj|BAC27161.1| unnamed protein produc ( 953) 1805 412.1 2e-112
gi|149267112|ref|XP_001478328.1| PREDICTED: hypoth ( 953) 1805 412.1 2e-112
gi|148672272|gb|EDL04219.1| histone deacetylase 7A ( 969) 1805 412.1 2e-112
gi|26331526|dbj|BAC29493.1| unnamed protein produc ( 946) 1802 411.4 3.2e-112
gi|26353936|dbj|BAC40598.1| unnamed protein produc ( 892) 1799 410.8 4.8e-112
gi|6911184|gb|AAF31419.1|AF207749_1 histone deacet ( 938) 1797 410.3 6.8e-112
gi|149032186|gb|EDL87098.1| histone deacetylase 7A ( 916) 1795 409.9 9.2e-112
gi|62653005|ref|XP_345869.2| PREDICTED: similar to ( 953) 1795 409.9 9.4e-112
gi|7542540|gb|AAF63491.1|AF239243_1 histone deacet ( 855) 1734 396.2 1.1e-107
gi|60098543|emb|CAH65102.1| hypothetical protein [ ( 946) 1644 376.1 1.3e-101
gi|183985772|gb|AAI66352.1| LOC100158627 protein [ ( 546) 1560 357.2 3.9e-96
gi|7022054|dbj|BAA91474.1| unnamed protein product ( 276) 1481 339.4 4.6e-91
gi|193885226|pdb|2VQQ|A Chain A, Structure Of Hdac ( 413) 1446 331.7 1.4e-88
gi|193885222|pdb|2VQJ|A Chain A, Structure Of Hdac ( 413) 1446 331.7 1.4e-88
gi|221044224|dbj|BAH13789.1| unnamed protein produ ( 668) 1446 331.8 2.1e-88
>>gi|28273132|dbj|BAC56929.1| FLJ00413 protein [Homo sap (308 aa)
initn: 2114 init1: 2114 opt: 2114 Z-score: 2554.7 bits: 480.8 E(): 1.3e-133
Smith-Waterman score: 2114; 100.000% identity (100.000% similar) in 308 aa overlap (1-308:1-308)
10 20 30 40 50 60
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|282 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAM
10 20 30 40 50 60
70 80 90 100 110 120
FLJ004 GFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|282 GFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNF
70 80 90 100 110 120
130 140 150 160 170 180
FLJ004 FPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|282 FPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVS
130 140 150 160 170 180
190 200 210 220 230 240
FLJ004 AGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|282 AGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVA
190 200 210 220 230 240
250 260 270 280 290 300
FLJ004 ALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKCGDGTLAELRLKDLGGTLPHRGQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|282 ALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKCGDGTLAELRLKDLGGTLPHRGQI
250 260 270 280 290 300
FLJ004 LGLPVPAR
::::::::
gi|282 LGLPVPAR
>>gi|119578362|gb|EAW57958.1| histone deacetylase 7A, is (398 aa)
initn: 2072 init1: 2072 opt: 2072 Z-score: 2502.4 bits: 471.5 E(): 1.1e-130
Smith-Waterman score: 2072; 100.000% identity (100.000% similar) in 303 aa overlap (6-308:96-398)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|119 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
70 80 90 100 110 120
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
130 140 150 160 170 180
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
190 200 210 220 230 240
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
250 260 270 280 290 300
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
310 320 330 340 350 360
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:::::::::::::::::::::::::::::::::
gi|119 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
370 380 390
>>gi|109099450|ref|XP_001110599.1| PREDICTED: similar to (496 aa)
initn: 1982 init1: 1982 opt: 1982 Z-score: 2392.4 bits: 451.5 E(): 1.5e-124
Smith-Waterman score: 1982; 98.299% identity (99.320% similar) in 294 aa overlap (6-299:176-469)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|109 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
150 160 170 180 190 200
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
210 220 230 240 250 260
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
:::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::
gi|109 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWTGGLDPPMGDP
270 280 290 300 310 320
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 EYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
330 340 350 360 370 380
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
gi|109 GAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
390 400 410 420 430 440
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
::::::::::::.::::::: :::
gi|109 KCGDGTLAELRLRDLGGTLPPRGQSPRALQCQPGDLLLVWSKIPVNDPGSN
450 460 470 480 490
>>gi|168177301|pdb|3C0Y|A Chain A, Crystal Structure Of (423 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2234.0 bits: 421.9 E(): 9.9e-116
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:143-413)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|168 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
120 130 140 150 160 170
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
180 190 200 210 220 230
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
240 250 260 270 280 290
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
300 310 320 330 340 350
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|168 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
360 370 380 390 400 410
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|168 KYWGCMQRLAS
420
>>gi|193785883|dbj|BAG54670.1| unnamed protein product [ (425 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2234.0 bits: 421.9 E(): 9.9e-116
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:96-366)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|193 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
70 80 90 100 110 120
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|193 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
130 140 150 160 170 180
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|193 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
190 200 210 220 230 240
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|193 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
250 260 270 280 290 300
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|193 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
310 320 330 340 350 360
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|193 KYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
370 380 390 400 410 420
>>gi|119578358|gb|EAW57954.1| histone deacetylase 7A, is (480 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2233.2 bits: 422.0 E(): 1.1e-115
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:151-421)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|119 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
130 140 150 160 170 180
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
190 200 210 220 230 240
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
250 260 270 280 290 300
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
310 320 330 340 350 360
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
370 380 390 400 410 420
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|119 KYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
430 440 450 460 470 480
>>gi|211826359|gb|AAH06453.2| HDAC7 protein [Homo sapien (530 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2232.6 bits: 422.0 E(): 1.2e-115
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:201-471)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|211 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
180 190 200 210 220 230
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|211 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
240 250 260 270 280 290
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|211 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
300 310 320 330 340 350
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|211 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
360 370 380 390 400 410
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|211 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
420 430 440 450 460 470
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|211 KYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
480 490 500 510 520 530
>>gi|32879885|gb|AAP88773.1| histone deacetylase 7A [Hom (614 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2231.7 bits: 422.0 E(): 1.3e-115
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:285-555)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|328 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
260 270 280 290 300 310
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|328 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
320 330 340 350 360 370
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|328 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
380 390 400 410 420 430
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|328 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
440 450 460 470 480 490
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|328 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
500 510 520 530 540 550
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|328 KYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
560 570 580 590 600 610
>>gi|119578359|gb|EAW57955.1| histone deacetylase 7A, is (700 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2230.8 bits: 422.1 E(): 1.5e-115
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:371-641)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|119 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
350 360 370 380 390 400
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
410 420 430 440 450 460
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
470 480 490 500 510 520
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
530 540 550 560 570 580
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
590 600 610 620 630 640
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|119 KYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
650 660 670 680 690 700
>>gi|34782905|gb|AAH20505.2| HDAC7 protein [Homo sapiens (711 aa)
initn: 1850 init1: 1850 opt: 1850 Z-score: 2230.7 bits: 422.1 E(): 1.5e-115
Smith-Waterman score: 1850; 100.000% identity (100.000% similar) in 271 aa overlap (6-276:382-652)
10 20 30
FLJ004 LWLPQVDTDTIWNELHSSNAARWAAGSVTDLAFKV
::::::::::::::::::::::::::::::
gi|347 PLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKV
360 370 380 390 400 410
40 50 60 70 80 90
FLJ004 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|347 ASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDVHHGN
420 430 440 450 460 470
100 110 120 130 140 150
FLJ004 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|347 GTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPPMGDP
480 490 500 510 520 530
160 170 180 190 200 210
FLJ004 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|347 EYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAG
540 550 560 570 580 590
220 230 240 250 260 270
FLJ004 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|347 GAVVLALEGGHDLTAICDASEACVAALLGNRVDPLSEEGWKQKPNLNAIRSLEAVIRVHS
600 610 620 630 640 650
280 290 300
FLJ004 KCGDGTLAELRLKDLGGTLPHRGQILGLPVPAR
:
gi|347 KYWGCMQRLASCPDSWVPRVPGADKEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
660 670 680 690 700 710
308 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (2 proc)
start: Sat Feb 28 02:55:19 2009 done: Sat Feb 28 03:01:06 2009
Total Scan time: 799.920 Total Display time: 0.070
Function used was FASTA [version 34.26.5 April 26, 2007]