# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00110.fasta.huge -Q ../query/FLJ00110.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00110, 224 aa vs ./tmplib.10216 library 2210770 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.9115+/-0.00458; mu= 15.2905+/- 0.310 mean_var=118.2164+/-25.593, 0's: 0 Z-trim: 2 B-trim: 5 in 1/39 Lambda= 0.117960 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0731 ( 1096 res) hk03714 (1096) 119 30.5 0.39 KIAA1446 ( 645 res) fg06734 ( 645) 116 29.7 0.41 KIAA0268 ( 1193 res) ha07061 (1193) 106 28.4 1.9 KIAA0831 ( 406 res) hj04502 ( 406) 95 25.9 3.7 KIAA1645 ( 386 res) fg04139 ( 386) 94 25.6 4 KIAA1536 ( 645 res) fj00456(revised) ( 645) 94 26.0 5.4 KIAA1286 ( 1214 res) hh11961(revised) (1214) 96 26.7 6.2 KIAA1661 ( 90 res) hg03945 ( 90) 83 22.9 6.4 KIAA0612 ( 1810 res) hg00654s1 (1810) 97 27.1 6.9 KIAA1967 ( 818 res) fj04244 ( 818) 92 25.8 7.9 KIAA0458 ( 1552 res) ef01252 (1552) 95 26.7 8 KIAA1813 ( 673 res) ph00819b ( 673) 90 25.3 8.9 KIAA1419 ( 2464 res) ff01653 (2464) 96 27.1 9.3 KIAA1731 ( 2056 res) bf02656 (2056) 95 26.8 9.5 KIAA1824 ( 958 res) fh17057 ( 958) 90 25.5 11 FLJ00052 ( 368 res) as00052 ( 368) 85 24.1 11 KIAA0304 ( 2415 res) af07172 (2415) 94 26.8 12 FLJ00404 ( 261 res) sj07851 ( 261) 83 23.5 12 KIAA0643 ( 403 res) hj03545 ( 403) 84 24.0 13 KIAA0159 ( 1406 res) ha03574 (1406) 90 25.8 14 KIAA1970 ( 519 res) fk07936 ( 519) 84 24.1 16 KIAA0043 ( 731 res) ha01331 ( 731) 85 24.5 17 KIAA1227 ( 1069 res) fh04710 (1069) 85 24.7 21 KIAA0359 ( 760 res) hh00048 ( 760) 83 24.2 22 KIAA1276 ( 1068 res) fh00139s1 (1068) 84 24.6 24 KIAA1222 ( 742 res) fh03567 ( 742) 82 24.0 24 KIAA1884 ( 946 res) fh04567 ( 946) 83 24.3 25 FLJ00191 ( 523 res) sj02390 ( 523) 80 23.5 25 KIAA1841 ( 523 res) fj20412(revised) ( 523) 80 23.5 25 KIAA0398 ( 476 res) hg00376 ( 476) 79 23.2 27 KIAA0542 ( 1212 res) hg04325s1 (1212) 83 24.5 29 KIAA1643 ( 993 res) hh10131(revised) ( 993) 82 24.2 29 KIAA0381 ( 1114 res) ah04695 (1114) 82 24.3 31 KIAA1254 ( 758 res) hh14357s1 ( 758) 80 23.7 31 FLJ00120 ( 1171 res) as00120 (1171) 82 24.3 31 FLJ00341 ( 2760 res) sf00005 (2760) 86 25.5 32 KIAA0252 ( 702 res) ha07048s1 ( 702) 79 23.5 33 KIAA1241 ( 863 res) fh10384 ( 863) 80 23.8 33 KIAA0010 ( 1086 res) ha00408 (1086) 81 24.1 34 KIAA1938 ( 1376 res) hg00912s1 (1376) 82 24.4 34 FLJ00283 ( 500 res) sh02088 ( 500) 77 22.9 35 KIAA1034 ( 761 res) fh00753 ( 761) 79 23.5 35 KIAA0855 ( 632 res) hk06219 ( 632) 78 23.2 35 KIAA1530 ( 794 res) hj05130(revised) ( 794) 79 23.5 36 FLJ00072 ( 204 res) as00072 ( 204) 72 21.5 37 KIAA1514 ( 1598 res) fh00815(revised) (1598) 82 24.5 38 KIAA0510 ( 95 res) hh00345 ( 95) 68 20.4 38 FLJ00358 ( 217 res) sh03894 ( 217) 72 21.6 38 FLJ00008 ( 217 res) as00008 ( 217) 72 21.6 38 FLJ00099 ( 217 res) as00099 ( 217) 72 21.6 38 >>KIAA0731 ( 1096 res) hk03714 (1096 aa) initn: 97 init1: 97 opt: 119 Z-score: 113.8 bits: 30.5 E(): 0.39 Smith-Waterman score: 119; 34.667% identity (54.667% similar) in 75 aa overlap (4-77:33-106) 10 20 30 FLJ001 GFAGHGELGASARCLGAVGVGLLLGVGDGGSQP : :: :.. . : : :.: :.: :: : KIAA07 DRVVCLARRASPPSVHIAAAPEPGSPGRPGGGGEGGTGLEACRARGGGVLRGTGGGGRTP 10 20 30 40 50 60 40 50 60 70 80 90 FLJ001 GQEGILREGPSAHVQQWMVGVGLCRALET-ACCPPPPQPDGSVSGSFRRAKLRLYLEQLK . :. :::. .::.:. : . : .:: :..: KIAA07 RRPGLQSGGPSSPPAP-LVGLGFTAAASNWEGAAPRVNPDPSLQGLGPSAPEEGVAGALL 70 80 90 100 110 120 100 110 120 130 140 150 FLJ001 QLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKEQLQQEHRFLKRRLEQLSVQS KIAA07 AKVNPWTKNALPPVLTTVNGQSPPEHSAPAKVVRAAVPKQRKGSKVGDFGDAINWPTPGE 130 140 150 160 170 180 >>KIAA1446 ( 645 res) fg06734 (645 aa) initn: 99 init1: 99 opt: 116 Z-score: 113.4 bits: 29.7 E(): 0.41 Smith-Waterman score: 116; 28.333% identity (56.667% similar) in 120 aa overlap (44-160:29-145) 20 30 40 50 60 70 FLJ001 CLGAVGVGLLLGVGDGGSQPGQEGILREGPSAHVQQWMVGVGLCRALETACCPPPPQPDG :: : .:... :. :::: . KIAA14 RPGGWVCVSVCVCVCVCVRARARRYSRVSAARPGWPAGLSFPRSAPRPG-PPPPCRCS 10 20 30 40 50 80 90 100 110 120 130 FLJ001 SVS---GSFRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSI ... : .:. .: ..:..: ::::: :.::. ...:. :. :: : KIAA14 ALQEQKGELRK-RLSYTTHKLEKL-ETEFDSTRHYLEIELRRAQEELEKVTEKLRRIQSN 60 70 80 90 100 110 140 150 160 170 180 190 FLJ001 KEQLQQEHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVG ::. .. :. .: ... . :. :. : KIAA14 YMALQRINQELEDKLYRMGQHYEEEKRALSHEIVALNSHLLEAKVTIDKLSEDNELYRKD 120 130 140 150 160 170 >>KIAA0268 ( 1193 res) ha07061 (1193 aa) initn: 66 init1: 44 opt: 106 Z-score: 101.4 bits: 28.4 E(): 1.9 Smith-Waterman score: 106; 25.000% identity (59.848% similar) in 132 aa overlap (88-208:597-728) 60 70 80 90 100 110 FLJ001 RALETACCPPPPQPDGSVSGSFRRAKLRLYLEQLKQLVPLGPDSTRHTTLSL----LKRA .:.::... .. . .. ..: :.. KIAA02 DTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDVISMNASEFSEVQIALNEAKLSEE 570 580 590 600 610 620 120 130 140 150 160 FLJ001 KVHIK--KLEEQDRRALSIKEQLQQEHRFLKRRLEQLS--VQSVERVRTDSTGSAVSTDD ::. . ...:.. : . ::::::: . .. .:: ..: :. . : . . :: KIAA02 KVKSECHRVQEENARLKKKKEQLQQEIEDWSKLHAELSEQIKSFEKSQKDLEVALTHKDD 630 640 650 660 670 680 170 180 190 200 210 220 FLJ001 SEQEVD--IEGMEFGPGELDSVGSSSDADDHYSLQSG-TGGDSGFGPHCRRLGRPALS . . . : ... : .: :... ..: : .: .::: KIAA02 NINALTNCITQLNLLECESESEGQNKGGNDSDELANGEVGGDRNEKMKNQIKQMMDVSRT 690 700 710 720 730 740 KIAA02 QTAISVVEEDLKLLQLKLRASVSTKCNLEDQVKKLEDDRNSLQAAKAGLEDECKTLRQKV 750 760 770 780 790 800 >>KIAA0831 ( 406 res) hj04502 (406 aa) initn: 56 init1: 56 opt: 95 Z-score: 96.2 bits: 25.9 E(): 3.7 Smith-Waterman score: 95; 29.333% identity (64.000% similar) in 75 aa overlap (79-150:22-95) 50 60 70 80 90 100 FLJ001 QWMVGVGLCRALETACCPPPPQPDGSVSGSFRRAKL---RLYLEQLKQLVPLGPDSTRHT :.: :. .. .::::: . : . ... KIAA08 SQVDNHINHKRPTFVIFITCFFQRWKIMSCKMRIEQLKQTICKGNEEMEKN 10 20 30 40 50 110 120 130 140 150 160 FLJ001 TLSLLKRAKVHIKKLEEQDRRALSIKEQLQQEHRFLKRRLEQLSVQSVERVRTDSTGSAV . .::: .: . .:: . .: ::..:...: : .:. .. KIAA08 SEGLLK-TKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRS 60 70 80 90 100 110 170 180 190 200 210 220 FLJ001 STDDSEQEVDIEGMEFGPGELDSVGSSSDADDHYSLQSGTGGDSGFGPHCRRLGRPALS KIAA08 HILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSKLAEARRTTYLSGRWVCDDHN 120 130 140 150 160 170 >>KIAA1645 ( 386 res) fg04139 (386 aa) initn: 121 init1: 76 opt: 94 Z-score: 95.5 bits: 25.6 E(): 4 Smith-Waterman score: 96; 31.250% identity (56.250% similar) in 80 aa overlap (11-78:3-78) 10 20 30 40 FLJ001 GFAGHGELGASARCLGAVGVGLLLGVGDGGSQ--PG---QEG------ILR-EGPSAHVQ :.:: . .:.: : :.:.. :: .:: :: :::... KIAA16 SVSGRCAALLGAG----VPDSGKRVAPGLSPSEGGPSHGLWLRIPGPSSRAI 10 20 30 40 50 60 70 80 90 100 FLJ001 QWMVGVGLCRALETACCPPPPQPDGSVSGSFRRAKLRLYLEQLKQLVPLGPDSTRHTTLS . : . .. . : ::::.:. . :. KIAA16 RVASGNCILPSMTAPCPPPPPDPQFVLRGTQSPVHALHFCEGAQAQGRPLLFSGSQSGLV 50 60 70 80 90 100 >>KIAA1536 ( 645 res) fj00456(revised) (645 aa) initn: 48 init1: 48 opt: 94 Z-score: 93.2 bits: 26.0 E(): 5.4 Smith-Waterman score: 94; 26.957% identity (57.391% similar) in 115 aa overlap (103-213:470-579) 80 90 100 110 120 130 FLJ001 GSVSGSFRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIKE . ..: :...: .. .:. : . :: KIAA15 KLSAEILRLEKAVQEERTQNQVFKTELAREKDSSLVQLSESKRELTELRSALRVLQKEKE 440 450 460 470 480 490 140 150 160 170 180 190 FLJ001 QLQQEHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDSVGSS :::.:.. : . ...: .. .:.: .. . ..:.: : : :. :. : . . KIAA15 QLQEEKQELLEYMRKLEAR-LEKVADEKWNEDATTEDEEAAV---GLSC-PAALTDSEDE 500 510 520 530 540 550 200 210 220 FLJ001 SDAD---DHYSL-QSGTGGDSGFGPHCRRLGRPALS : : :.: . : :.: :: KIAA15 SPEDMRLPPYGLCERGDPGSSPAGPREASPLVVISQPAPISPHLSGPAEDSSSDSEAEDE 560 570 580 590 600 610 >>KIAA1286 ( 1214 res) hh11961(revised) (1214 aa) initn: 114 init1: 71 opt: 96 Z-score: 92.2 bits: 26.7 E(): 6.2 Smith-Waterman score: 96; 25.352% identity (52.817% similar) in 142 aa overlap (91-224:913-1052) 70 80 90 100 110 FLJ001 ETACCPPPPQPDGSVSGSFRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLL-KRAKVHIKK ...: ..::. : :: . .:..: .:: KIAA12 PRKVEEDELLEKSPLQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPLSGVGRRTSVLFKK 890 900 910 920 930 940 120 130 140 150 160 170 FLJ001 LEEQDRRALSIKEQLQ--QEHRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSE---QEV .. . : . :. ..: :.. .. : . . : ...: :. KIAA12 AKNGVKLQRSPDRVLENGEDHGVAGSPASPASIEEERHSRKRPRSRSCSESEGERSPQQE 950 960 970 980 990 1000 180 190 200 210 220 FLJ001 DIEGMEFGPGELDSVGSSSDADDHYSLQSGTGGD--SGFGPHCRRLGRPALS . :: : :. : ::.. .:..: . . ::. : : :.:::: KIAA12 EETGMTNGFGKHTESG--SDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGV 1010 1020 1030 1040 1050 1060 KIAA12 NGDSDYNGSGRSLLLPFEDRGDLKPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPI 1070 1080 1090 1100 1110 1120 >>KIAA1661 ( 90 res) hg03945 (90 aa) initn: 119 init1: 49 opt: 83 Z-score: 91.9 bits: 22.9 E(): 6.4 Smith-Waterman score: 83; 37.778% identity (68.889% similar) in 45 aa overlap (168-210:8-52) 140 150 160 170 180 190 FLJ001 HRFLKRRLEQLSVQSVERVRTDSTGSAVSTDDSEQEVDIEGMEF-GPGELDSVGSSSDAD ::.... : .: : :. :. :...: : KIAA16 GDDGGGCDDGDDDGDDDGGGGDGGGDGDDGGDGGDDD 10 20 30 200 210 220 FLJ001 -DHYSLQSGTGGDSGFGPHCRRLGRPALS :: . ..: :::.: KIAA16 GDHDDGDGGYGGDDGDDDGDGGGDGDDDDSDDGGDDANDDGGGCHALLTSGKD 40 50 60 70 80 90 >>KIAA0612 ( 1810 res) hg00654s1 (1810 aa) initn: 58 init1: 58 opt: 97 Z-score: 91.3 bits: 27.1 E(): 6.9 Smith-Waterman score: 97; 23.490% identity (57.047% similar) in 149 aa overlap (78-221:373-512) 50 60 70 80 90 100 FLJ001 QQWMVGVGLCRALETACCPPPPQPDGSVSGSFRRAK-LRLYLEQLKQLVP-LGPDSTRHT ..:... :. ::.:.:.. . . :. KIAA06 SGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREVAQRRQ 350 360 370 380 390 400 110 120 130 140 150 160 FLJ001 TLSLL-KRAKVHIKKLEEQDRRALSIKEQLQQEHRFLKRRLEQLSVQSVE-RVRTDSTGS : . ..:.. ... .:. :: . . . :.::. . ::. ...:.. ::: KIAA06 QLEVEHEQARLSLREKQEEVRRLQQAQAEAQREHEGAVQLLES-TLDSMQARVRELEEQC 410 420 430 440 450 460 170 180 190 200 210 220 FLJ001 AVSTDD-SEQEVDIEGMEFGPGELDSVGSSSDADDHYSLQSGTGGDSGFGPHCRRLGRPA .:.. : ....... :: :: . :. : :. :: : : . .: KIAA06 RSQTEQFSLLAQELQAFRLHPGPLDLLTSALDC--------GSLGDCPPPPCCCSIPQPC 470 480 490 500 510 FLJ001 LS KIAA06 RGSGPKDLDLPPGSPGRCTPKSSEPAPATLTGVPRRTAKKAESLSNSSHSESIHNSPKSC 520 530 540 550 560 570 >>KIAA1967 ( 818 res) fj04244 (818 aa) initn: 119 init1: 63 opt: 92 Z-score: 90.3 bits: 25.8 E(): 7.9 Smith-Waterman score: 92; 37.288% identity (61.017% similar) in 59 aa overlap (102-157:748-806) 80 90 100 110 120 130 FLJ001 DGSVSGSFRRAKLRLYLEQLKQLVPLGPDSTRHTTLSLLKRAKVHIKKLEEQDRRALSIK : .: . ... .:.. . :: : : : KIAA19 DSGRLYLENKIHTLELKLEESHNRFSATEVTNKTLAAEMQELRVRLAEAEETARTAERQK 720 730 740 750 760 770 140 150 160 170 180 FLJ001 EQLQQEHRFLKRRLE--QLSVQSV-ERVRTDSTGSAVSTDDSEQEVDIEGMEFGPGELDS :::. . :.::: :: .: : :.:: KIAA19 SQLQRLLQELRRRLTPLQLEIQRVVEKVRWGWTRRQHSSFP 780 790 800 810 224 residues in 1 query sequences 2210770 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:34:55 2009 done: Fri Feb 27 10:34:56 2009 Total Scan time: 0.390 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]