# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00097.fasta.huge -Q ../query/FLJ00097.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00097, 85 aa vs ./tmplib.10216 library 2210909 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.4373+/-0.00371; mu= 9.9393+/- 0.250 mean_var=78.0121+/-17.296, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.145209 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1661 ( 90 res) hg03945 ( 90) 94 27.2 0.13 KIAA1831 ( 663 res) hk00543 ( 663) 82 25.7 2.6 KIAA1695 ( 1199 res) fj11471 (1199) 84 26.4 2.8 KIAA1092 ( 1154 res) hk04417 (1154) 83 26.2 3.2 FLJ00089 ( 349 res) as00089 ( 349) 76 24.1 4.1 KIAA0783 ( 899 res) hk05408 ( 899) 79 25.2 4.9 KIAA1450 ( 1139 res) fh12401b (1139) 78 25.1 6.6 KIAA1281 ( 1534 res) hh04108s1 (1534) 79 25.5 6.9 KIAA0386 ( 1085 res) hj00015 (1085) 76 24.7 8.5 KIAA0347 ( 1281 res) hg01528(revised) (1281) 76 24.8 9.5 KIAA1876 ( 803 res) pf01162s1 ( 803) 73 23.9 11 KIAA0842 ( 1020 res) hk05077 (1020) 73 24.0 13 KIAA1121 ( 1390 res) hh10147 (1390) 74 24.4 13 KIAA1932 ( 795 res) fj14525 ( 795) 71 23.5 14 KIAA0462 ( 2276 res) hg00891 (2276) 75 24.8 16 KIAA0705 ( 1483 res) hg03359s1 (1483) 73 24.2 16 FLJ00117 ( 331 res) as00117 ( 331) 66 22.0 17 FLJ00418 ( 200 res) sj09371 ( 200) 63 21.1 19 KIAA1465 ( 785 res) fh13187 ( 785) 69 23.0 19 KIAA1737 ( 400 res) pj00125 ( 400) 66 22.1 19 KIAA0855 ( 632 res) hk06219 ( 632) 68 22.7 19 KIAA0224 ( 1256 res) ha04657 (1256) 71 23.7 19 KIAA1542 ( 1654 res) hh03408 (1654) 72 24.0 20 KIAA0323 ( 724 res) hg00467 ( 724) 68 22.8 21 KIAA1543 ( 917 res) hh05613a ( 917) 69 23.1 21 FLJ00246 ( 1486 res) sj08543 (1486) 71 23.8 22 KIAA0649 ( 1253 res) hj04122 (1253) 70 23.5 22 KIAA2035 ( 1135 res) ff09201 (1135) 69 23.2 24 KIAA0528 ( 1003 res) fj15856 (1003) 68 23.0 26 KIAA1059 ( 1297 res) hh12158 (1297) 69 23.3 26 FLJ00028 ( 91 res) as00028 ( 91) 57 19.4 27 FLJ00274 ( 1386 res) sh00469 (1386) 69 23.3 27 FLJ00207 ( 288 res) sj04935 ( 288) 62 21.1 27 KIAA0985 ( 697 res) hj08038 ( 697) 65 22.1 31 KIAA0035 ( 707 res) ha01976 ( 707) 65 22.1 32 KIAA1889 ( 505 res) fk02634 ( 505) 63 21.6 34 KIAA1719 ( 1050 res) pf00330s1 (1050) 66 22.6 35 KIAA1951 ( 679 res) fj05532 ( 679) 64 21.9 36 FLJ00077 ( 278 res) as00077 ( 278) 60 20.6 36 KIAA1130 ( 575 res) hh00715 ( 575) 63 21.6 37 FLJ00094 ( 376 res) as00094 ( 376) 61 21.0 38 KIAA1346 ( 999 res) fj00671 ( 999) 65 22.3 40 KIAA0176 ( 265 res) ha03941 ( 265) 59 20.4 40 KIAA1062 ( 1771 res) hj03579s1 (1771) 67 23.0 43 KIAA1623 ( 1236 res) fj04650 (1236) 65 22.4 45 KIAA0819 ( 989 res) hh01037 ( 989) 64 22.1 45 KIAA0397 ( 1016 res) fj00010 (1016) 64 22.1 46 KIAA0047 ( 268 res) ha01551 ( 268) 58 20.2 47 KIAA1368 ( 1049 res) fj03125 (1049) 64 22.1 47 KIAA1113 ( 1131 res) hj06379(revised) (1131) 64 22.2 49 >>KIAA1661 ( 90 res) hg03945 (90 aa) initn: 103 init1: 69 opt: 94 Z-score: 122.6 bits: 27.2 E(): 0.13 Smith-Waterman score: 95; 45.161% identity (74.194% similar) in 31 aa overlap (40-70:2-31) 10 20 30 40 50 60 FLJ000 PEEVVSRNMDVKGAPAEVLGGNEGHDIGREDGGGDCSDASTDLGDQDAAAITAGGKGEDR : :: :.:.. : ::.:... .:: :.: KIAA16 GDDGGGCDDGDDD-GDDDGGGGDGGGDGDDG 10 20 30 70 80 FLJ000 GPLRASRRSQACRPLG : KIAA16 GDGGDDDGDHDDGDGGYGGDDGDDDGDGGGDGDDDDSDDGGDDANDDGGGCHALLTSGKD 40 50 60 70 80 90 >>KIAA1831 ( 663 res) hk00543 (663 aa) initn: 72 init1: 72 opt: 82 Z-score: 98.9 bits: 25.7 E(): 2.6 Smith-Waterman score: 82; 34.921% identity (57.143% similar) in 63 aa overlap (22-83:538-599) 10 20 30 40 50 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEVLGGNEGHDIGREDGGGDCSDASTD :: :: :.: :..: . .: : :.: KIAA18 PPACRSPLPPGGDQGPFSSPKAWPEEWGGAGAQAEELAGYEAEDEAGMQGPGP-RDGSPL 510 520 530 540 550 560 60 70 80 FLJ000 LGD-QDAAAITAGGKGEDRGPLRASRRSQACRPLG :: .:... .:::. :: : . .: KIAA18 LGGCSDSSGSLREEEGEDEEPLPPLRAPAGTEPEPIAMLVLRGSSSRGPDAGCLTEELGE 570 580 590 600 610 620 KIAA18 PAATERPAQPGAANPLVVGAVALLDLSLAFLFSQLLT 630 640 650 660 >>KIAA1695 ( 1199 res) fj11471 (1199 aa) initn: 57 init1: 57 opt: 84 Z-score: 98.2 bits: 26.4 E(): 2.8 Smith-Waterman score: 84; 27.848% identity (54.430% similar) in 79 aa overlap (7-77:84-162) 10 20 30 FLJ000 ALDRKSLDCPEE-----VVSRNMDVKGAPAEVLGGN .:: :: : .:... ::. ... KIAA16 GVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDCLEELGIAAVSQRHLNKKGTDLDLVEQL 60 70 80 90 100 110 40 50 60 70 80 FLJ000 EGHDIG--REDGGGDCSDASTDLGDQDAAAITAGGKGEDRG-PLRASRRSQACRPLG . .... .::: . :. :.. ..: :: :: : ::: KIAA16 NIYEVALRHEDGDETTEPPPSGCRDRRRASVCSSGGGEHRGLDRRRSRRHSVQSIKSTLS 120 130 140 150 160 170 KIAA16 APTSPCSQSAPSFKPNQVRDLREKSSPSGLLTSSFRQHQESLAAERERRRQEREERLQRI 180 190 200 210 220 230 >>KIAA1092 ( 1154 res) hk04417 (1154 aa) initn: 54 init1: 54 opt: 83 Z-score: 97.3 bits: 26.2 E(): 3.2 Smith-Waterman score: 83; 38.298% identity (55.319% similar) in 47 aa overlap (29-71:66-110) 10 20 30 40 50 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEVLGGNEGHDIGREDGGG----DCSDASTDLGD :: :: .: :.:: ::: . . :: KIAA10 AAGGALPTSPGPALGAKGALKAGVGEGGGGGGRLGHGRARYDSGGVSNGDCSLGVS--GD 40 50 60 70 80 90 60 70 80 FLJ000 QDAAAITAGGKGEDRGPLRASRRSQACRPLG . :. : : .: .: KIAA10 EARASPTRGPRGVALAPTPSAVVCTLPRESKPGGLPRRSSIIKDGTKQKRERKKTVSFSS 100 110 120 130 140 150 >>FLJ00089 ( 349 res) as00089 (349 aa) initn: 74 init1: 50 opt: 76 Z-score: 95.4 bits: 24.1 E(): 4.1 Smith-Waterman score: 76; 33.898% identity (55.932% similar) in 59 aa overlap (29-80:7-65) 10 20 30 40 50 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEVLGGNEGHDIGRE--DGGGDCSDASTDLG----D ::..:. :: : :: :.. . . : : FLJ000 RPEGGKGGHRGEAKQREVEDPGGVCKENTQQRGAAEAD 10 20 30 60 70 80 FLJ000 QDAAAITAGGKGEDR-GPLRASRRSQACRPLG ..:.: ::. . : : : : . : FLJ000 PATSALTRGGRERGREGSAVALRAGPAGEGAAMSRERPPGTDIPRNLSFIAALTERAYYR 40 50 60 70 80 90 >>KIAA0783 ( 899 res) hk05408 (899 aa) initn: 96 init1: 68 opt: 79 Z-score: 94.0 bits: 25.2 E(): 4.9 Smith-Waterman score: 79; 28.571% identity (58.929% similar) in 56 aa overlap (1-56:31-80) 10 20 30 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEVLGG ::: : : . :. : .:. : KIAA07 VFSKRPPHGFLMDRSSKRRQVKPLAASLLEALDYDSSDDSDFKVGDASDSEGS------G 10 20 30 40 50 40 50 60 70 80 FLJ000 NEGHDIGREDGGGDCSDASTDLGDQDAAAITAGGKGEDRGPLRASRRSQACRPLG : ..: ....: :.:::. .. ... KIAA07 NGSEDASKDSGEGSCSDSEENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQLIKMEKKE 60 70 80 90 100 110 >>KIAA1450 ( 1139 res) fh12401b (1139 aa) initn: 55 init1: 55 opt: 78 Z-score: 91.7 bits: 25.1 E(): 6.6 Smith-Waterman score: 78; 25.641% identity (55.128% similar) in 78 aa overlap (8-85:625-697) 10 20 30 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEVLGGNEGHDIG .::: . ::.. .: : . .:. . : KIAA14 ITVRNEPALVPPILPPTAAERHNPWPTGFPECPEGTDSRDLGLK--PDK--EANRRPEQG 600 610 620 630 640 650 40 50 60 70 80 FLJ000 REDGGGDCSDASTDLGDQDAAAITAGGKGEDRGPLRASRRSQACRPLG : .. : ..: . . :. : . . ..: .: : .:. :: KIAA14 SEACSAGCLGPASDASWKPQNAFC-GDEKNKEAPQDGSSRLPSCEVLGAGMKMDQQAVCE 660 670 680 690 700 KIAA14 LLKVEMPTRLPDRSVAWPCPDRHLREKPSLEKVTFQIGSFASPESDFESRMKKMEERVKA 710 720 730 740 750 760 >>KIAA1281 ( 1534 res) hh04108s1 (1534 aa) initn: 40 init1: 40 opt: 79 Z-score: 91.3 bits: 25.5 E(): 6.9 Smith-Waterman score: 79; 25.000% identity (59.211% similar) in 76 aa overlap (10-82:150-225) 10 20 30 FLJ000 ALDRKSLDCPE-EVVSRNMDVKGAPAEVLGGNEGHDIGR :: ... ..:.: :.:. : : . . KIAA12 HKETSKSKVKRSKTSKDANKSLPSAALYGIPEISSTGKRQEVQGRPGEATGMNSALGQSV 120 130 140 150 160 170 40 50 60 70 80 FLJ000 EDGGGDCSDASTDLGDQDAAAITAG--GKGEDRGPLRASRRSQACRPLG .::. .... . .::. :: ::.... : ... : : KIAA12 SSGGSGNPNSNSTSTSTSAATAGAGSCGKSKEEKPGKSQSSRGAKRDKDAGKSRKDKHDL 180 190 200 210 220 230 KIAA12 LQGHQNGSGSQAPSGGHLYGFGAKSNGGGASPFHCGGTGSGSVAAAGEVSKSAPDSGLMG 240 250 260 270 280 290 >>KIAA0386 ( 1085 res) hj00015 (1085 aa) initn: 59 init1: 37 opt: 76 Z-score: 89.7 bits: 24.7 E(): 8.5 Smith-Waterman score: 76; 28.916% identity (50.602% similar) in 83 aa overlap (1-82:459-537) 10 20 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEV-LG :: .: : . : : .. .::: :. KIAA03 LPDDIFENGKAAEEKMPLSLSFSDLPNGDCALTSHSTGSPSN--STNPEITITPAEFNLS 430 440 450 460 470 480 30 40 50 60 70 80 FLJ000 GNEGHDIGREDGGGDCSDASTDLGDQDAAAITAGGKGEDRGPLRASRRSQACRPLG . ... : .: .. : : :.. . . : : : :: :.::: KIAA03 SLASQNEGMDDTSSASSRNSLGEGQEPKSHLKEEDPEEPRKP--ASAPSEACRRQSSGAG 490 500 510 520 530 540 KIAA03 AEHLFLENDVAEALLQESEEASELKPVELDTSEGNITKQLVKRLTSAEVPMATDRLLSEG 550 560 570 580 590 600 >>KIAA0347 ( 1281 res) hg01528(revised) (1281 aa) initn: 76 init1: 76 opt: 76 Z-score: 88.8 bits: 24.8 E(): 9.5 Smith-Waterman score: 76; 43.478% identity (82.609% similar) in 23 aa overlap (31-53:70-92) 10 20 30 40 50 60 FLJ000 ALDRKSLDCPEEVVSRNMDVKGAPAEVLGGNEGHDIGREDGGGDCSDASTDLGDQDAAAI ::. . ::.. :.::.:.. .:: KIAA03 PTKEPVEPQPSQVPLQEDVDMSSGSSGHETNENCSTGRDSQGSDCDDSGKELGMLVEPPD 40 50 60 70 80 90 70 80 FLJ000 TAGGKGEDRGPLRASRRSQACRPLG KIAA03 ARQSPDTFSLMMAKSEHNPSTSGCSSDQSSKVDTHKELIKTLKELKVHLPADKKAKGKAS 100 110 120 130 140 150 85 residues in 1 query sequences 2210909 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:33:53 2009 done: Fri Feb 27 10:33:54 2009 Total Scan time: 0.280 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]