# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00094.fasta.nr -Q ../query/FLJ00094.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00094, 376 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7816468 sequences Expectation_n fit: rho(ln(x))= 6.2081+/-0.0002; mu= 6.8818+/- 0.011 mean_var=113.9503+/-21.721, 0's: 23 Z-trim: 55 B-trim: 123 in 1/66 Lambda= 0.120148 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440496|dbj|BAB15781.1| FLJ00094 protein [Homo ( 376) 2672 473.5 3.2e-131 gi|119606098|gb|EAW85692.1| SRY (sex determining r ( 376) 2667 472.7 5.8e-131 gi|7158399|gb|AAF37424.1|AF164104_1 transcription ( 328) 2173 387.0 3.1e-105 gi|10720294|sp|P57073.1|SOX8_HUMAN RecName: Full=T ( 446) 2173 387.1 3.9e-105 gi|7018298|emb|CAB75612.1| c394H11.1 (similar to S ( 520) 2173 387.1 4.4e-105 gi|114660282|ref|XP_510724.2| PREDICTED: similar t ( 372) 2164 385.5 1e-104 gi|10720403|sp|Q04886.2|SOX8_MOUSE RecName: Full=T ( 464) 931 171.8 2.6e-40 gi|26329803|dbj|BAC28640.1| unnamed protein produc ( 464) 931 171.8 2.6e-40 gi|26329121|dbj|BAC28299.1| unnamed protein produc ( 464) 930 171.6 2.9e-40 gi|37926475|gb|AAP59791.1| Sry-related gene 8 [Tra ( 375) 831 154.4 3.6e-35 gi|1199770|dbj|BAA11868.1| SoxP1 [Oncorhynchus myk ( 467) 808 150.5 6.8e-34 gi|33415936|gb|AAQ18505.1| transcription factor So ( 462) 798 148.8 2.2e-33 gi|194380472|dbj|BAG58389.1| unnamed protein produ ( 445) 797 148.6 2.5e-33 gi|48375124|gb|AAT42231.1| transcription factor So ( 462) 796 148.4 2.8e-33 gi|60549975|gb|AAX24132.1| DNA-binding transcripti ( 462) 795 148.2 3.2e-33 gi|82582249|sp|Q6IZ48.2|SOX8_TETNG RecName: Full=T ( 462) 783 146.2 1.4e-32 gi|61808324|gb|AAX56088.1| HMG-box transcription f ( 428) 773 144.4 4.3e-32 gi|134025636|gb|AAI36048.1| Sox10 protein [Xenopus ( 436) 761 142.3 1.8e-31 gi|24711594|gb|AAN62483.1| transcription factor So ( 446) 748 140.1 8.9e-31 gi|213623671|gb|AAI70062.1| LOC398422 protein [Xen ( 448) 748 140.1 8.9e-31 gi|194219408|ref|XP_001497479.2| PREDICTED: simila ( 341) 729 136.7 7.1e-30 gi|194678503|ref|XP_608786.4| PREDICTED: similar t ( 747) 729 137.0 1.3e-29 gi|168479560|dbj|BAG11536.1| Sry-box protein 9 [Ep ( 498) 724 136.0 1.7e-29 gi|70727925|gb|AAZ07990.1| HMG box transcription f ( 460) 722 135.6 2.1e-29 gi|9964081|gb|AAG09814.1|AF277096_1 HMG box transc ( 462) 720 135.2 2.6e-29 gi|115394120|gb|ABI97016.1| Sry-type HMG box 10 [A ( 447) 709 133.3 9.6e-29 gi|73959185|ref|XP_547203.2| PREDICTED: similar to ( 231) 691 130.0 5.1e-28 gi|73959183|ref|XP_865245.1| PREDICTED: similar to ( 459) 691 130.2 8.5e-28 gi|73959187|ref|XP_852224.1| PREDICTED: similar to ( 462) 691 130.2 8.6e-28 gi|73959189|ref|XP_865294.1| PREDICTED: similar to ( 463) 691 130.2 8.6e-28 gi|149052122|gb|EDM03939.1| SRY-box containing gen ( 463) 691 130.2 8.6e-28 gi|126308526|ref|XP_001370056.1| PREDICTED: simila ( 512) 689 129.9 1.2e-27 gi|194226825|ref|XP_001916500.1| PREDICTED: SRY (s ( 450) 683 128.8 2.2e-27 gi|76363934|gb|ABA41588.1| transcription factor So ( 457) 682 128.7 2.5e-27 gi|55715624|gb|AAV59015.1| HMG-box transcription f ( 360) 678 127.9 3.4e-27 gi|45501110|gb|AAH67133.1| Sox9b protein [Danio re ( 398) 678 127.9 3.7e-27 gi|9964083|gb|AAG09815.1|AF277097_1 HMG box transc ( 407) 678 127.9 3.7e-27 gi|171362742|dbj|BAG14376.1| SoxE family protein E ( 401) 677 127.7 4.2e-27 gi|195537625|dbj|BAG67029.1| SoxE protein [Lethent ( 446) 674 127.3 6.4e-27 gi|34223471|gb|AAQ62978.1| Sox9a transcription fac ( 464) 674 127.3 6.6e-27 gi|84380305|gb|ABC58685.1| HMG box protein SoxE3 [ ( 539) 674 127.3 7.4e-27 gi|80973855|gb|ABB53636.1| Sox9 [Petromyzon marinu ( 436) 672 126.9 8.1e-27 gi|149485783|ref|XP_001506094.1| PREDICTED: simila ( 508) 672 127.0 9e-27 gi|74484299|gb|ABA10785.1| Sox8 [Scyliorhinus cani ( 224) 663 125.1 1.4e-26 gi|149594937|ref|XP_001516652.1| PREDICTED: simila ( 213) 660 124.6 2e-26 gi|38503365|sp|Q9BG89.1|SOX9_PANTR RecName: Full=T ( 509) 665 125.7 2.1e-26 gi|1351096|sp|P48436.1|SOX9_HUMAN RecName: Full=Tr ( 509) 665 125.7 2.1e-26 gi|12698702|gb|AAK01648.1| SOX9 [Hylobates sp. TIB ( 509) 665 125.7 2.1e-26 gi|30583965|gb|AAP36231.1| Homo sapiens SRY (sex d ( 510) 665 125.7 2.1e-26 gi|61216727|sp|Q9BG91.1|SOX9_CALJA RecName: Full=T ( 509) 661 125.1 3.4e-26 >>gi|10440496|dbj|BAB15781.1| FLJ00094 protein [Homo sap (376 aa) initn: 2672 init1: 2672 opt: 2672 Z-score: 2512.2 bits: 473.5 E(): 3.2e-131 Smith-Waterman score: 2672; 100.000% identity (100.000% similar) in 376 aa overlap (1-376:1-376) 10 20 30 40 50 60 FLJ000 AYQPSQTGAGRFSQRSVLPGATGGSGAHGRRVSLVRASWPRPLLPVPPVVCACAEGTVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 AYQPSQTGAGRFSQRSVLPGATGGSGAHGRRVSLVRASWPRPLLPVPPVVCACAEGTVGA 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 LAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 LAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGA 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 ELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPELKLEGRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 ELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPELKLEGRR 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 PVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEPGQAYGGAYFHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 PVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEPGQAYGGAYFHA 190 200 210 220 230 240 250 260 270 280 290 300 FLJ000 GVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQPRGSPDYGSCSGQSSATPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 GVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQPRGSPDYGSCSGQSSATPA 250 260 270 280 290 300 310 320 330 340 350 360 FLJ000 APAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 APAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHS 310 320 330 340 350 360 370 FLJ000 PTSHWDQPVYTTLTRP :::::::::::::::: gi|104 PTSHWDQPVYTTLTRP 370 >>gi|119606098|gb|EAW85692.1| SRY (sex determining regio (376 aa) initn: 2667 init1: 2667 opt: 2667 Z-score: 2507.5 bits: 472.7 E(): 5.8e-131 Smith-Waterman score: 2667; 99.734% identity (100.000% similar) in 376 aa overlap (1-376:1-376) 10 20 30 40 50 60 FLJ000 AYQPSQTGAGRFSQRSVLPGATGGSGAHGRRVSLVRASWPRPLLPVPPVVCACAEGTVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AYQPSQTGAGRFSQRSVLPGATGGSGAHGRRVSLVRASWPRPLLPVPPVVCACAEGTVGA 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 LAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHSDSDSGA 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 ELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPELKLEGRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPELKLEGRR 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 PVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEPGQAYGGAYFHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPLGGPAPPEPGQAYGGAYFHA 190 200 210 220 230 240 250 260 270 280 290 300 FLJ000 GVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQPRGSPDYGSCSGQSSATPA :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQPRGSPDYGSCSGQSSATPA 250 260 270 280 290 300 310 320 330 340 350 360 FLJ000 APAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHS 310 320 330 340 350 360 370 FLJ000 PTSHWDQPVYTTLTRP :::::::::::::::: gi|119 PTSHWDQPVYTTLTRP 370 >>gi|7158399|gb|AAF37424.1|AF164104_1 transcription fact (328 aa) initn: 2173 init1: 2173 opt: 2173 Z-score: 2045.5 bits: 387.0 E(): 3.1e-105 Smith-Waterman score: 2173; 99.672% identity (100.000% similar) in 305 aa overlap (72-376:24-328) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|715 KLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 10 20 30 40 50 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|715 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP 60 70 80 90 100 110 170 180 190 200 210 220 FLJ000 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|715 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL 120 130 140 150 160 170 230 240 250 260 270 280 FLJ000 GGPAPPEPGQAYGGAYFHAGVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|715 GGPAPPEPGQAYGGAYFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ 180 190 200 210 220 230 290 300 310 320 330 340 FLJ000 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|715 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP 240 250 260 270 280 290 350 360 370 FLJ000 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP ::::::::::::::::::::::::::::::::::: gi|715 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP 300 310 320 >>gi|10720294|sp|P57073.1|SOX8_HUMAN RecName: Full=Trans (446 aa) initn: 2173 init1: 2173 opt: 2173 Z-score: 2043.7 bits: 387.1 E(): 3.9e-105 Smith-Waterman score: 2173; 99.672% identity (100.000% similar) in 305 aa overlap (72-376:142-446) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|107 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 120 130 140 150 160 170 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP 180 190 200 210 220 230 170 180 190 200 210 220 FLJ000 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL 240 250 260 270 280 290 230 240 250 260 270 280 FLJ000 GGPAPPEPGQAYGGAYFHAGVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|107 GGPAPPEPGQAYGGAYFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ 300 310 320 330 340 350 290 300 310 320 330 340 FLJ000 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|107 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP 360 370 380 390 400 410 350 360 370 FLJ000 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP ::::::::::::::::::::::::::::::::::: gi|107 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP 420 430 440 >>gi|7018298|emb|CAB75612.1| c394H11.1 (similar to SOX ( (520 aa) initn: 2173 init1: 2173 opt: 2173 Z-score: 2042.8 bits: 387.1 E(): 4.4e-105 Smith-Waterman score: 2173; 99.672% identity (100.000% similar) in 305 aa overlap (72-376:216-520) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|701 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 190 200 210 220 230 240 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|701 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP 250 260 270 280 290 300 170 180 190 200 210 220 FLJ000 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|701 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL 310 320 330 340 350 360 230 240 250 260 270 280 FLJ000 GGPAPPEPGQAYGGAYFHAGVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|701 GGPAPPEPGQAYGGAYFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ 370 380 390 400 410 420 290 300 310 320 330 340 FLJ000 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|701 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP 430 440 450 460 470 480 350 360 370 FLJ000 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP ::::::::::::::::::::::::::::::::::: gi|701 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP 490 500 510 520 >>gi|114660282|ref|XP_510724.2| PREDICTED: similar to c3 (372 aa) initn: 2164 init1: 2164 opt: 2164 Z-score: 2036.3 bits: 385.5 E(): 1e-104 Smith-Waterman score: 2164; 99.016% identity (100.000% similar) in 305 aa overlap (72-376:68-372) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|114 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 40 50 60 70 80 90 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTP 100 110 120 130 140 150 170 180 190 200 210 220 FLJ000 KTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|114 KTELQQAGAKPELKLEGRRPADSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQYLPL 160 170 180 190 200 210 230 240 250 260 270 280 FLJ000 GGPAPPEPGQAYGGAYFHAGVSPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|114 GGPAPPEPGQAYGGAYFHAGASPVWAHKSAPSASASPTETGPPRPHIKTEQPSPGHYGDQ 220 230 240 250 260 270 290 300 310 320 330 340 FLJ000 PRGSPDYGSCSGQSSATPAAPAGPFAGSQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|114 PRGSPDYGSCSGQSSATPAAPAGPFAGAQGDYGDLQASSYYGAYPGYAPGLYQYPCFHSP 280 290 300 310 320 330 350 360 370 FLJ000 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP ::::::::::::::::::::::::::::::::::: gi|114 RRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP 340 350 360 370 >>gi|10720403|sp|Q04886.2|SOX8_MOUSE RecName: Full=Trans (464 aa) initn: 1441 init1: 498 opt: 931 Z-score: 880.0 bits: 171.8 E(): 2.6e-40 Smith-Waterman score: 1556; 74.006% identity (86.544% similar) in 327 aa overlap (72-376:139-464) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|107 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDH-TGQTHGPPTPPTT :::::::.:.:.::::::.::: :::: .:::.: ::..:::.:: ::::::::::::: gi|107 QPRRRKSVKTGRSDSDSGTELGHHPGG-PMYKADAVLGEAHHHSDHHTGQTHGPPTPPTT 170 180 190 200 210 220 170 180 190 200 210 FLJ000 PKTELQQA--GAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQY :::.:.:: :.: ::.::::: ::::::::::::::::::::::...::.::::::::: gi|107 PKTDLHQASNGSKQELRLEGRRLVDSGRQNIDFSNVDISELSSEVISNMDTFDVHEFDQY 230 240 250 260 270 280 220 230 240 250 260 FLJ000 LPLGGPA--PPEPGQA-----YGGA-YFHAGV-----SPVWAHKSAPSASASPTETGPPR :::.: . : ::.:: :::: : :.:. :::::::.::::::::::.:: : gi|107 LPLNGHSALPTEPSQATASGSYGGASYSHSGATGIGASPVWAHKGAPSASASPTEAGPLR 290 300 310 320 330 340 270 280 290 300 310 FLJ000 PHIKTEQPSPGHYGDQPRGSP---DYGSCSGQSSATPAAPA---GPFAGSQGDYGDLQAS :.::::: ::.::.:: .::: :::: :.:.:.: :: : . ::..: :: ::::: gi|107 PQIKTEQLSPSHYNDQSHGSPGRADYGSYSAQASVTTAASATAASSFASAQCDYTDLQAS 350 360 370 380 390 400 320 330 340 350 360 370 FLJ000 SYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP .::. :::: :.::::: ::: ::::::::::::..::::::.:.:::::::::::: gi|107 NYYSPYPGYPPSLYQYPYFHSSRRPYASPLLNGLSMPPAHSPSSNWDQPVYTTLTRP 410 420 430 440 450 460 >>gi|26329803|dbj|BAC28640.1| unnamed protein product [M (464 aa) initn: 1441 init1: 498 opt: 931 Z-score: 880.0 bits: 171.8 E(): 2.6e-40 Smith-Waterman score: 1556; 74.006% identity (86.544% similar) in 327 aa overlap (72-376:139-464) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|263 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDH-TGQTHGPPTPPTT :::::::.:.:.::::::.::: :::: .:::.: ::..:::.:: ::::::::::::: gi|263 QPRRRKSVKTGRSDSDSGTELGHHPGG-PMYKADAVLGEAHHHSDHHTGQTHGPPTPPTT 170 180 190 200 210 220 170 180 190 200 210 FLJ000 PKTELQQA--GAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQY :::.:.:: :.: ::.::::: ::::::::::::::::::::::...::.::::::::: gi|263 PKTDLHQASNGSKQELRLEGRRLVDSGRQNIDFSNVDISELSSEVISNMDTFDVHEFDQY 230 240 250 260 270 280 220 230 240 250 260 FLJ000 LPLGGPA--PPEPGQA-----YGGA-YFHAGV-----SPVWAHKSAPSASASPTETGPPR :::.: . : ::.:: :::: : :.:. :::::::.::::::::::.:: : gi|263 LPLNGHSALPTEPSQATASGSYGGASYSHSGATGIGASPVWAHKGAPSASASPTEAGPLR 290 300 310 320 330 340 270 280 290 300 310 FLJ000 PHIKTEQPSPGHYGDQPRGSP---DYGSCSGQSSATPAAPA---GPFAGSQGDYGDLQAS :.::::: ::.::.:: .::: :::: :.:.:.: :: : . ::..: :: ::::: gi|263 PQIKTEQLSPSHYNDQSHGSPGRADYGSYSAQASVTTAASATAASSFASAQCDYTDLQAS 350 360 370 380 390 400 320 330 340 350 360 370 FLJ000 SYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP .::. :::: :.::::: ::: ::::::::::::..::::::.:.:::::::::::: gi|263 NYYSPYPGYPPSLYQYPYFHSSRRPYASPLLNGLSMPPAHSPSSNWDQPVYTTLTRP 410 420 430 440 450 460 >>gi|26329121|dbj|BAC28299.1| unnamed protein product [M (464 aa) initn: 1440 init1: 498 opt: 930 Z-score: 879.1 bits: 171.6 E(): 2.9e-40 Smith-Waterman score: 1555; 74.006% identity (86.239% similar) in 327 aa overlap (72-376:139-464) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY :::::::::::::::::::::::::::::: gi|263 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKY 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDH-TGQTHGPPTPPTT :::::::.:.:.::::::.::: :::: .:::.: ::..:::.:: ::::::::::::: gi|263 QPRRRKSVKTGRSDSDSGTELGHHPGG-PMYKADAVLGEAHHHSDHHTGQTHGPPTPPTT 170 180 190 200 210 220 170 180 190 200 210 FLJ000 PKTELQQA--GAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQY :::.:.:: :.: ::.::::: ::::::::::::::::::::::...:: ::::::::: gi|263 PKTDLHQASNGSKQELRLEGRRLVDSGRQNIDFSNVDISELSSEVISNMDNFDVHEFDQY 230 240 250 260 270 280 220 230 240 250 260 FLJ000 LPLGGPA--PPEPGQA-----YGGA-YFHAGV-----SPVWAHKSAPSASASPTETGPPR :::.: . : ::.:: :::: : :.:. :::::::.::::::::::.:: : gi|263 LPLNGHSALPTEPSQATASGSYGGASYSHSGATGIGASPVWAHKGAPSASASPTEAGPLR 290 300 310 320 330 340 270 280 290 300 310 FLJ000 PHIKTEQPSPGHYGDQPRGSP---DYGSCSGQSSATPAAPA---GPFAGSQGDYGDLQAS :.::::: ::.::.:: .::: :::: :.:.:.: :: : . ::..: :: ::::: gi|263 PQIKTEQLSPSHYNDQSHGSPGRADYGSYSAQASVTTAASATAASSFASAQCDYTDLQAS 350 360 370 380 390 400 320 330 340 350 360 370 FLJ000 SYYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP .::. :::: :.::::: ::: ::::::::::::..::::::.:.:::::::::::: gi|263 NYYSPYPGYPPSLYQYPYFHSSRRPYASPLLNGLSMPPAHSPSSNWDQPVYTTLTRP 410 420 430 440 450 460 >>gi|37926475|gb|AAP59791.1| Sry-related gene 8 [Trachem (375 aa) initn: 992 init1: 353 opt: 831 Z-score: 787.6 bits: 154.4 E(): 3.6e-35 Smith-Waterman score: 1268; 64.331% identity (81.529% similar) in 314 aa overlap (72-364:65-375) 50 60 70 80 90 100 FLJ000 PLLPVPPVVCACAEGTVGALAIPASALCCSLLSESEKRPFVEEAERLRVQHKKDHPDYKY ::::.::::::::::::::::::::::::: gi|379 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQHKKDHPDYKY 40 50 60 70 80 90 110 120 130 140 150 FLJ000 QPRRRKSAKAGHSDSDSGAELGPHPGGGAVYKAEAGLG---DGHHHGDHTGQTHGPPTPP :::::::.:::.:::::::::. : .:. .:::..::: :.:::.::::::::::::: gi|379 QPRRRKSVKAGQSDSDSGAELSHH-AGSQIYKADTGLGGVGDSHHHSDHTGQTHGPPTPP 100 110 120 130 140 150 160 170 180 190 200 210 FLJ000 TTPKTELQQAGAKPELKLEGRRPVDSGRQNIDFSNVDISELSSEVMGTMDAFDVHEFDQY :::::.:.. :.: ::: :::: :.::::::::::::::::::::.. : .:::.:.::: gi|379 TTPKTDLHH-GSKQELKHEGRRLVESGRQNIDFSNVDISELSSEVIN-MKTFDVRELDQY 160 170 180 190 200 210 220 230 240 250 260 FLJ000 LPLGGPA--PPEPGQ-----AYGGAYFHA-----GVSPVWAHKSAPSASASPTETGPPRP :::.: . : :: .:: .: :. :.. .:.::: :.: . .::. :: gi|379 LPLNGHSAMPAGHGQNSSAGSYGPSYSHSANGTSGAAQAWTHKSPASVSPTLNETSQQRP 220 230 240 250 260 270 270 280 290 300 310 320 FLJ000 HIKTEQPSPGHYGDQPRGSP---DYGSCSGQSSATPAAPA---GPFAGSQGDYGDLQASS :::::: ::.::.:: .::: :::: :.:. :: :. : . :..:: :: :::.:. gi|379 HIKTEQLSPSHYSDQSHGSPTHSDYGSYSAQACATTASTATAAASFSSSQCDYTDLQSSN 280 290 300 310 320 330 330 340 350 360 370 FLJ000 YYGAYPGYAPGLYQYPCFHSPRRPYASPLLNGLALPPAHSPTSHWDQPVYTTLTRP ::. : :: ..:::: ::: :::::.:.::::..:::::::.. gi|379 YYNPYSGYPSSIYQYPYFHSSRRPYATPILNGLSIPPAHSPTAN 340 350 360 370 376 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 21:55:49 2009 done: Fri Feb 27 22:02:02 2009 Total Scan time: 850.210 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]