# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00091.fasta.nr -Q ../query/FLJ00091.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00091, 170 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824476 sequences Expectation_n fit: rho(ln(x))= 5.1597+/-0.000189; mu= 8.3995+/- 0.011 mean_var=88.9018+/-16.926, 0's: 53 Z-trim: 60 B-trim: 0 in 0/66 Lambda= 0.136025 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676426|dbj|BAB84865.1| FLJ00091 protein [Homo ( 170) 1343 272.4 2.3e-71 gi|119596958|gb|EAW76552.1| hCG2024112, isoform CR ( 173) 1343 272.4 2.4e-71 gi|198132708|gb|EDY68374.1| GA27442 [Drosophila ps ( 935) 192 47.2 0.0076 >>gi|18676426|dbj|BAB84865.1| FLJ00091 protein [Homo sap (170 aa) initn: 1343 init1: 1343 opt: 1343 Z-score: 1437.4 bits: 272.4 E(): 2.3e-71 Smith-Waterman score: 1343; 100.000% identity (100.000% similar) in 170 aa overlap (1-170:1-170) 10 20 30 40 50 60 FLJ000 QPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 QPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPAL 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 GAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDHAGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDHAGC 70 80 90 100 110 120 130 140 150 160 170 FLJ000 VAPGTWHPAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP :::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VAPGTWHPAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP 130 140 150 160 170 >>gi|119596958|gb|EAW76552.1| hCG2024112, isoform CRA_e (173 aa) initn: 1343 init1: 1343 opt: 1343 Z-score: 1437.3 bits: 272.4 E(): 2.4e-71 Smith-Waterman score: 1343; 100.000% identity (100.000% similar) in 170 aa overlap (1-170:4-173) 10 20 30 40 50 FLJ000 QPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EGNQPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPG 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 PALGAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PALGAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDH 70 80 90 100 110 120 120 130 140 150 160 170 FLJ000 AGCVAPGTWHPAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AGCVAPGTWHPAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP 130 140 150 160 170 >>gi|198132708|gb|EDY68374.1| GA27442 [Drosophila pseudo (935 aa) initn: 206 init1: 97 opt: 192 Z-score: 207.3 bits: 47.2 E(): 0.0076 Smith-Waterman score: 201; 37.226% identity (48.905% similar) in 137 aa overlap (34-152:81-209) 10 20 30 40 FLJ000 CAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRT---RTGG----------- : : ::..:: : :: gi|198 AFGGPGPGAPGQGWPGPGEPGHGGPGSGGPRPGGPGPGGPRPDGPRPGGPTPGGPGPWEP 60 70 80 90 100 110 50 60 70 80 90 100 FLJ000 GHGAPDPG-PALGAADPACHCRDPGGVSTSSDGGHRAL--VLHHPLWVPGVWLHLPGDCE :::.: :: :: :. :. .::::. .: : : .. ::: :: : gi|198 GHGGPGPGWPAPGVPGPGVP--EPGGVGPGSAGPGFAGPGAVGSSGLRPGV--PTPGGPE 120 130 140 150 160 110 120 130 140 150 160 FLJ000 QGGPRWCWGDHAGCVAPGTWHP-AMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQ ::: : :.: :: .: . :: .::: : : . ::. : gi|198 PGGPGSGWPGHGG-PEPGGPRPGSTGPGGPGP-GWPAP--GAPGQGWPAPGVPGPGGHEP 170 180 190 200 210 220 170 FLJ000 VCVLP gi|198 GGPGPGGPGPGSLGPGRPGPGSPGPGLPGPGGPGPGGLGPAGPTPGGPGPGRPTPGRPGP 230 240 250 260 270 280 170 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 21:33:41 2009 done: Fri Feb 27 21:38:01 2009 Total Scan time: 621.110 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]