# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00091.fasta.huge -Q ../query/FLJ00091.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00091, 170 aa vs ./tmplib.10216 library 2210824 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.3312+/-0.00518; mu= 26.3999+/- 0.353 mean_var=183.9544+/-40.277, 0's: 0 Z-trim: 2 B-trim: 28 in 1/39 Lambda= 0.094563 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0522 ( 1555 res) hg01393 (1555) 136 30.5 0.44 KIAA0665 ( 760 res) hk02064 ( 760) 131 29.1 0.56 FLJ00259 ( 659 res) sh04102 ( 659) 126 28.2 0.87 FLJ00176 ( 403 res) sj00934 ( 403) 123 27.3 0.98 KIAA0458 ( 1552 res) ef01252 (1552) 115 27.6 3.2 FLJ00280 ( 440 res) sh01728 ( 440) 109 25.5 3.8 KIAA0227 ( 336 res) ha02748 ( 336) 108 25.1 3.8 FLJ00420 ( 613 res) sj09535 ( 613) 109 25.9 4.2 KIAA0691 ( 762 res) hk03735 ( 762) 109 26.1 4.5 FLJ00193 ( 491 res) sj02629 ( 491) 106 25.2 5.2 KIAA0385 ( 1380 res) hh00802 (1380) 108 26.5 6 KIAA1292 ( 595 res) hk05468(revised) ( 595) 105 25.3 6.1 FLJ00198 ( 677 res) sj03504 ( 677) 104 25.3 7 FLJ00131 ( 173 res) sh01962 ( 173) 97 23.0 8.8 FLJ00099 ( 217 res) as00099 ( 217) 97 23.2 9.5 FLJ00358 ( 217 res) sh03894 ( 217) 97 23.2 9.5 FLJ00008 ( 217 res) as00008 ( 217) 97 23.2 9.5 KIAA1510 ( 1140 res) fg02934(revised) (1140) 101 25.4 11 FLJ00277 ( 357 res) sh01540 ( 357) 96 23.5 12 KIAA1133 ( 891 res) hg03758b ( 891) 99 24.9 12 KIAA1361 ( 1005 res) fj02367 (1005) 99 25.0 13 KIAA1064 ( 1315 res) hj05008s1 (1315) 99 25.2 14 FLJ00121 ( 448 res) sh00381 ( 448) 95 23.6 14 KIAA1858 ( 2469 res) ae00147 (2469) 99 25.9 17 FLJ00094 ( 376 res) as00094 ( 376) 92 23.1 18 KIAA1887 ( 967 res) fk02232 ( 967) 95 24.4 18 KIAA1984 ( 339 res) hk01547 ( 339) 91 22.8 19 KIAA1639 ( 2584 res) af14886 (2584) 97 25.6 21 KIAA1780 ( 1192 res) pf01012 (1192) 93 24.3 24 FLJ00038 ( 199 res) as00038 ( 199) 86 21.6 26 FLJ00318 ( 127 res) sh07374 ( 127) 84 20.9 27 KIAA0722 ( 1066 res) hk02030s1 (1066) 91 23.9 27 KIAA1135 ( 789 res) hj05037 ( 789) 89 23.4 30 KIAA1932 ( 795 res) fj14525 ( 795) 89 23.4 30 KIAA1870 ( 832 res) hh05136b ( 832) 89 23.4 31 KIAA0855 ( 632 res) hk06219 ( 632) 87 22.9 34 KIAA1463 ( 1166 res) fh18591s1 (1166) 89 23.8 34 KIAA1511 ( 1253 res) fg04486(revised) (1253) 89 23.8 35 KIAA1865 ( 723 res) fj14303 ( 723) 87 23.0 35 KIAA1423 ( 616 res) fh08369(revised) ( 616) 86 22.7 37 FLJ00283 ( 500 res) sh02088 ( 500) 85 22.4 38 KIAA0765 ( 952 res) hk04803s1 ( 952) 87 23.3 39 FLJ00278 ( 176 res) sh01653 ( 176) 81 20.8 40 KIAA1813 ( 673 res) ph00819b ( 673) 85 22.7 42 FLJ00228 ( 393 res) sj06463 ( 393) 83 21.9 43 KIAA0561 ( 1308 res) hh01676 (1308) 87 23.6 43 FLJ00083 ( 216 res) as00083 ( 216) 81 21.0 43 KIAA0672 ( 824 res) hk02382 ( 824) 85 22.9 44 KIAA0821 ( 1566 res) hh02631 (1566) 87 23.8 45 FLJ00079 ( 84 res) as00079 ( 84) 77 19.5 46 >>KIAA0522 ( 1555 res) hg01393 (1555 aa) initn: 116 init1: 70 opt: 136 Z-score: 112.8 bits: 30.5 E(): 0.44 Smith-Waterman score: 136; 29.375% identity (41.250% similar) in 160 aa overlap (6-161:1309-1460) 10 20 30 FLJ000 QPLCAHHLWGRCERREGSGCLAADNMKTSC-DENR :: . . . : : : . : . . KIAA05 KRGKGPFQMPPPPTGQASASSSSASSTHHHHHHHHHGHSHGGLGVLPDGQSKLQALHAQY 1280 1290 1300 1310 1320 1330 40 50 60 70 80 90 FLJ000 GTGAGPAAPRTRTGGGHGAPDPGPALGAADPACHCRDPGGVSTSSDGGHRALVLHHPLWV : ::: : . : : : : : .:. : :: . : : : KIAA05 CQGPGPAPPPYLPPQQPSLPPP-PQQPPPLPQLGSIPPPPASAPPVGPHRHFHAHGP--V 1340 1350 1360 1370 1380 1390 100 110 120 130 140 150 FLJ000 PGVWLHLPGDCEQG-GPRWCWGDHAGCVAPGTWHPAMGPCSPGPLGNPE-QHLSHPGRLW :: . : . : .:: : : :: :: : :: :: .: :: :.. KIAA05 PGPQHYTLG--RPGRAPRRGAGGHPQ-FAPHGRHPLHQPTSPLPLYSPAPQH--PPAHKQ 1400 1410 1420 1430 1440 1450 160 170 FLJ000 GQQP-LRQHHLLLQVCVLP : . . .:: KIAA05 GPKHFIFSHHPQMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSPHSPIPPHPSYPPLPPP 1460 1470 1480 1490 1500 1510 >>KIAA0665 ( 760 res) hk02064 (760 aa) initn: 94 init1: 66 opt: 131 Z-score: 110.8 bits: 29.1 E(): 0.56 Smith-Waterman score: 131; 31.034% identity (46.552% similar) in 116 aa overlap (38-148:8-107) 10 20 30 40 50 60 FLJ000 LWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPALGAADPAC : ::.: :. .::: : :. : KIAA06 PLGSMASAPPASP---PGSEPPGPDPEP--GGPD--- 10 20 70 80 90 100 110 120 FLJ000 HCRDPGGVSTSSDGGHRALVLHHPL-----WVPGVWLHLPGDCEQGGPRWCWGDHAGCVA ::... . : : : :. ::. :: .:: :: : : . KIAA06 ---GPGAAQLAP--GPAELRLGAPVGGPDPQSPGLDEPAPGAAADGGARWSAGPAPG-LE 30 40 50 60 70 80 130 140 150 160 170 FLJ000 PGTWHPAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP : : :: .: : ..:. .:. : KIAA06 GGPRDP--GPSAPPPRSGPRGQLASPDAPGPGPRSEAPLPELDPLFSWTEEPEECGPASC 90 100 110 120 130 140 >>FLJ00259 ( 659 res) sh04102 (659 aa) initn: 59 init1: 59 opt: 126 Z-score: 107.5 bits: 28.2 E(): 0.87 Smith-Waterman score: 137; 29.927% identity (46.715% similar) in 137 aa overlap (10-135:158-282) 10 20 30 FLJ000 QPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAG :.:.: .:: . : .: .: .. : FLJ002 SHAYPVRCLLPSAHGSCADWAARWYFVASVGQCNRFWYGGCHGNANNFASEQECMSSCQG 130 140 150 160 170 180 40 50 60 70 80 90 FLJ000 PAAPRTRTGGGHGAPDPGPALGAADPACHCRDPGGVSTSSD---GGHR--ALVLHHPLWV :: : : ::. . : : :: : ... . :: : : ..: FLJ002 SL---------HGPRRPQP--GASGRSTHT-DGGGSSPAGEQEPSQHRTGAAVQRKPWPS 190 200 210 220 230 100 110 120 130 140 FLJ000 PGVWLH--LPGDCE----QGGPRWCWGDHAGCVAPGTWHPAMGPCSPGPLGNPEQHLSHP :.: . :: : :. .: ::.. : ::: : .: : FLJ002 GGLWRQDQQPGPGEAPHTQAFGEWPWGQELGSRAPGLGGDAGSPAPPFHSSSYRISLAGV 240 250 260 270 280 290 150 160 170 FLJ000 GRLWGQQPLRQHHLLLQVCVLP FLJ002 EPSLVQAALGQLVRLSCSDDTAPESQAAWQKDGQPISSDRHRLQFDGSLIIHPLQAEDAG 300 310 320 330 340 350 >>FLJ00176 ( 403 res) sj00934 (403 aa) initn: 102 init1: 80 opt: 123 Z-score: 106.5 bits: 27.3 E(): 0.98 Smith-Waterman score: 123; 30.719% identity (47.712% similar) in 153 aa overlap (32-165:53-195) 10 20 30 40 50 FLJ000 PLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAP---DPG- :... .. :::. : ::: ::: FLJ001 RRCLHLPGQTLQLSPEAPPLLPGPAQRLAVESQAPAGQDAAPEDGGPGPAGAPRCGDPGC 30 40 50 60 70 80 60 70 80 90 100 FLJ000 ----PALGAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGV-WLH--LPGDCEQG-- : ::: :: ..:.: .. :: : : .::: : :: .: FLJ001 AGQAAARTAADQPCHREQPSGPQSLPLPGH-----HVPT-APGVRWGSGGLPEGAGHGDR 90 100 110 120 130 110 120 130 140 150 160 FLJ000 GPRWCWGDH-AGCVAPGTWH-----PAMGPCSPGPLGNPEQHLSHPGRLWGQQPLRQHHL :: : : :. .::.. :. . : : . . ::: :.. :.: . FLJ001 GP----GGHGAAGTAPAVADLQRLCRALLQAGRLPGGRAAAEQGPPGRAAGERTLHQPRR 140 150 160 170 180 190 170 FLJ000 LLQVCVLP .: FLJ001 QFQKAENHFSTAIRHNPQKAQYYLYRAKSRQLLQNIFGARQDVATVLLLNPKQPKLSLLM 200 210 220 230 240 250 >>KIAA0458 ( 1552 res) ef01252 (1552 aa) initn: 96 init1: 62 opt: 115 Z-score: 97.3 bits: 27.6 E(): 3.2 Smith-Waterman score: 115; 27.481% identity (43.511% similar) in 131 aa overlap (35-157:817-943) 10 20 30 40 50 60 FLJ000 AHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPALGAAD :... :.:: :: ::: : KIAA04 QQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAG 790 800 810 820 830 840 70 80 90 100 110 FLJ000 PACHCRDPG---GVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCE----QGGPRWCWGDH : . : :. ... :. : : . :.::.. : :: KIAA04 PLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPP 850 860 870 880 890 900 120 130 140 150 160 170 FLJ000 AGCVAPGTWHPAMGPCSPGP-LGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP : . : : : .: : : :. : .:: .: : .:. KIAA04 APLAMPHIKPP---PTTPIPQLPAPQAH-KHPPHLSGPSPFSMNANLPPPPALKPLSSLS 910 920 930 940 950 960 KIAA04 THHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 970 980 990 1000 1010 1020 >>FLJ00280 ( 440 res) sh01728 (440 aa) initn: 147 init1: 78 opt: 109 Z-score: 96.0 bits: 25.5 E(): 3.8 Smith-Waterman score: 109; 39.286% identity (50.000% similar) in 56 aa overlap (110-156:4-58) 80 90 100 110 120 130 FLJ000 DGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDHAGCV------APGTWH-PAMGP ::: :: :: . :: . :. : FLJ002 VARPRWGWGCHADGTRTRTLPPPGILRTPGTLP 10 20 30 140 150 160 170 FLJ000 CSPGPLGNPEQHLSHPGR--LWGQQPLRQHHLLLQVCVLP : :: : :. : ::. : :. : FLJ002 C-PGTLPPPRTHSYLPGHSPLLGHTPTSRDTPPSRNTLPPPWMLPSPRTLPSPRTLPSPR 40 50 60 70 80 90 >>KIAA0227 ( 336 res) ha02748 (336 aa) initn: 98 init1: 70 opt: 108 Z-score: 95.9 bits: 25.1 E(): 3.8 Smith-Waterman score: 108; 30.328% identity (43.443% similar) in 122 aa overlap (10-124:113-227) 10 20 30 FLJ000 QPLCAHHLWGRCERREGSGCLAADNMKTSCDENRGTGAG :: ::. ::. : : : : KIAA02 GRRPRLLNPGRRGGGGGGGQIAARTRRRGGGRMERK-GSAAGAKGN---PSPPAAGEGQR 90 100 110 120 130 40 50 60 70 80 90 FLJ000 PAAPRTRTGGGHGAPDPGPALGAADPA-----CHCRDPGGVSTSSDGGHRALV--LHHPL : : ::: ::: : . .::.:: : :.. .: : . :. : KIAA02 PPPPLCVPGGGGGAPARGQVGAAAEPAELIRRAHEFKSQGAQCYKDKKFREAIGKYHRAL 140 150 160 170 180 190 100 110 120 130 140 150 FLJ000 WVPGVWLHLPGDCEQGGPRWCWGDHAGCVAPGTWHPAMGPCSPGPLGNPEQHLSHPGRLW : ::. :. . .. :: . :: KIAA02 LELKGLLPPPGERERDSRA---ASPAGALKPGRLSEEQSKTVEAIEIDCYNSLAACLLQA 200 210 220 230 240 250 160 170 FLJ000 GQQPLRQHHLLLQVCVLP KIAA02 ELVNYERVKEYCLKVLKKEGENFKALYRSGVAFYHLGDYDKALYYLKEARTQQPTDTNVI 260 270 280 290 300 310 >>FLJ00420 ( 613 res) sj09535 (613 aa) initn: 68 init1: 55 opt: 109 Z-score: 95.1 bits: 25.9 E(): 4.2 Smith-Waterman score: 109; 30.000% identity (50.909% similar) in 110 aa overlap (35-141:326-429) 10 20 30 40 50 60 FLJ000 AHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPALGAAD :.:.: .. . ...: :: : ::.. FLJ004 AQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGA---GKQNGATS 300 310 320 330 340 350 70 80 90 100 110 120 FLJ000 PACHCRD-PGGVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDHAGCVAP . : :. :. ::.::. : . : :. : : . : :: ::: FLJ004 YSSVVADSPAEVALSSSGGNNA--SSQALGPPS-GPHNPPPSTSKEPSAAAPTGAGGVAP 360 370 380 390 400 130 140 150 160 170 FLJ000 GTWHPAMGPC--SPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP :. . . :: : :.. : FLJ004 GSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLKS 410 420 430 440 450 460 >>KIAA0691 ( 762 res) hk03735 (762 aa) initn: 68 init1: 55 opt: 109 Z-score: 94.6 bits: 26.1 E(): 4.5 Smith-Waterman score: 109; 30.000% identity (50.909% similar) in 110 aa overlap (35-141:411-514) 10 20 30 40 50 60 FLJ000 AHHLWGRCERREGSGCLAADNMKTSCDENRGTGAGPAAPRTRTGGGHGAPDPGPALGAAD :.:.: .. . ...: :: : ::.. KIAA06 AQAVAPPAPSGPSTTQPRPPSVQPSGGGGGGSGGGGSSSSSNSSAGGGA---GKQNGATS 390 400 410 420 430 70 80 90 100 110 120 FLJ000 PACHCRD-PGGVSTSSDGGHRALVLHHPLWVPGVWLHLPGDCEQGGPRWCWGDHAGCVAP . : :. :. ::.::. : . : :. : : . : :: ::: KIAA06 YSSVVADSPAEVALSSSGGNNA--SSQALGPPS-GPHNPPPSTSKEPSAAAPTGAGGVAP 440 450 460 470 480 490 130 140 150 160 170 FLJ000 GTWHPAMGPC--SPGPLGNPEQHLSHPGRLWGQQPLRQHHLLLQVCVLP :. . . :: : :.. : KIAA06 GSGNNSGGPSLLVPLPVNPPSSPTPSFSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLKS 500 510 520 530 540 550 >>FLJ00193 ( 491 res) sj02629 (491 aa) initn: 56 init1: 56 opt: 106 Z-score: 93.5 bits: 25.2 E(): 5.2 Smith-Waterman score: 125; 24.859% identity (42.938% similar) in 177 aa overlap (4-170:21-180) 10 20 30 FLJ000 QPLCAHHLWG-----RCERREGSGCLAADNMKTSCDENRGTGA : . ::: : ..:. :: .: . : . FLJ001 PCSWTLSVPGFWMGARCHLSCPEGLWGVNCSNTCTCKNGGTCLP-ENGNCVCAPGF---R 10 20 30 40 50 40 50 60 70 80 90 FLJ000 GPAAPRTRTGGGHGAPDPGPALGAADPACHCRDPGGVSTSSDGGHRALVLHHPLWVPGVW ::. :. : .: : : :: :.. . .: . .: :: : FLJ001 GPSCQRSCQPGRYGK-RCVPCKCANHSFCH---PSNGTCYCLAGWTGPDCSQPC-PPGHW 60 70 80 90 100 110 100 110 120 130 140 150 FLJ000 LH---LPGDCEQGGPRWCWGDHAGCVAPGTW--HPAMGPCSPGPLGNPEQHLSHPGRLWG . .:..:: : . ..:. : : : . : :::. . :.: . FLJ001 GENCAQTCQCHHGGT--CHPQDGSCICPLGWTGHHCLEGC---PLGTFGANCSQPCQC-- 120 130 140 150 160 160 170 FLJ000 QQPLRQHHLLLQVCVLP : .. : .:: : FLJ001 -GPGEKCHPETGACVCPPGHSGAPCRIGIQEPFTVMPTTPVAYNSLGAVIGIAVLGSLVV 170 180 190 200 210 220 170 residues in 1 query sequences 2210824 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:33:15 2009 done: Fri Feb 27 10:33:15 2009 Total Scan time: 0.340 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]