# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00082.fasta.nr -Q ../query/FLJ00082.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00082, 71 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827137 sequences Expectation_n fit: rho(ln(x))= 4.5864+/-0.000177; mu= 6.0637+/- 0.010 mean_var=54.3790+/-10.759, 0's: 44 Z-trim: 48 B-trim: 2785 in 1/67 Lambda= 0.173924 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676420|dbj|BAB84862.1| FLJ00082 protein [Homo ( 71) 482 127.6 1.5e-28 gi|194373603|dbj|BAG56897.1| unnamed protein produ ( 588) 222 63.0 3.5e-08 gi|194376146|dbj|BAG62832.1| unnamed protein produ ( 697) 222 63.1 4e-08 gi|73909153|gb|AAH60874.2| NBEAL2 protein [Homo sa ( 973) 222 63.2 5.2e-08 gi|37182034|gb|AAQ88820.1| SQFE253 [Homo sapiens] (1003) 222 63.2 5.3e-08 gi|148677062|gb|EDL09009.1| mCG146094 [Mus musculu ( 448) 217 61.7 6.7e-08 gi|119585205|gb|EAW64801.1| hCG15426, isoform CRA_ (1554) 222 63.3 7.6e-08 gi|119585207|gb|EAW64803.1| hCG15426, isoform CRA_ (2040) 222 63.4 9.4e-08 gi|34526553|dbj|BAC85154.1| FLJ00341 protein [Homo (2760) 222 63.5 1.2e-07 gi|73985939|ref|XP_541900.2| PREDICTED: similar to (2305) 217 62.2 2.5e-07 gi|219521767|gb|AAI72118.1| Unknown (protein for M (2723) 217 62.2 2.8e-07 gi|189030822|sp|Q6ZQA0.2|NBEL2_MOUSE RecName: Full (2742) 217 62.2 2.8e-07 gi|109483998|ref|XP_236649.4| PREDICTED: similar t (2745) 217 62.2 2.8e-07 gi|194221387|ref|XP_001916603.1| PREDICTED: neurob (2748) 217 62.2 2.8e-07 gi|187957482|gb|AAI57957.1| Nbeal2 protein [Mus mu (2750) 217 62.2 2.8e-07 gi|149260328|ref|XP_982666.2| PREDICTED: similar t (2825) 217 62.2 2.9e-07 gi|194677363|ref|XP_001255343.2| PREDICTED: simila (2720) 205 59.2 2.3e-06 gi|34534829|dbj|BAC87125.1| unnamed protein produc (1314) 200 57.7 3e-06 gi|116242670|sp|Q6ZS30.2|NBEL1_HUMAN RecName: Full (1314) 200 57.7 3e-06 gi|26334213|dbj|BAC30824.1| unnamed protein produc ( 550) 196 56.5 3e-06 gi|187252583|gb|AAI66673.1| Neurobeachin-like 1 [s (1335) 200 57.7 3.1e-06 gi|109486150|ref|XP_001070133.1| PREDICTED: simila (1504) 200 57.8 3.4e-06 gi|33417009|gb|AAH55813.1| Nbeal1 protein [Mus mus ( 707) 196 56.6 3.7e-06 gi|119590731|gb|EAW70325.1| hCG2036623, isoform CR (2285) 201 58.2 4e-06 gi|32415551|gb|AAO45288.1| beach protein [Homo sap ( 974) 196 56.6 4.8e-06 gi|34536111|dbj|BAC87543.1| unnamed protein produc (1042) 196 56.7 5.1e-06 gi|194222498|ref|XP_001497646.2| PREDICTED: simila (2519) 200 57.9 5.1e-06 gi|157041262|ref|NP_001096643.1| neurobeachin-like (2592) 200 57.9 5.2e-06 gi|109487222|ref|XP_001070093.1| PREDICTED: simila (2619) 200 57.9 5.3e-06 gi|189538223|ref|XP_001344257.2| PREDICTED: simila (1885) 198 57.3 5.7e-06 gi|149944613|ref|NP_001092743.1| neurobeachin-like (1404) 196 56.8 6.4e-06 gi|148667728|gb|EDL00145.1| mCG116543 [Mus musculu (1942) 196 56.9 8.3e-06 gi|126338027|ref|XP_001371551.1| PREDICTED: simila (2676) 197 57.2 9e-06 gi|149635527|ref|XP_001508701.1| PREDICTED: simila (2269) 196 56.9 9.4e-06 gi|109100697|ref|XP_001094456.1| PREDICTED: simila (2295) 196 56.9 9.5e-06 gi|149046043|gb|EDL98936.1| rCG22325 [Rattus norve (2645) 196 56.9 1.1e-05 gi|153791557|ref|NP_775620.2| neurobeachin like 1 (2688) 196 56.9 1.1e-05 gi|114582852|ref|XP_525997.2| PREDICTED: similar t (2750) 196 57.0 1.1e-05 gi|118093506|ref|XP_421964.2| PREDICTED: hypotheti (2298) 195 56.6 1.1e-05 gi|74005629|ref|XP_545603.2| PREDICTED: similar to (3133) 196 57.0 1.2e-05 gi|47225484|emb|CAG11967.1| unnamed protein produc (2783) 193 56.2 1.9e-05 gi|47216728|emb|CAG01002.1| unnamed protein produc (2221) 191 55.6 2.2e-05 gi|210111674|gb|EEA59471.1| hypothetical protein B ( 538) 170 50.0 0.00027 gi|215493323|gb|EEC02964.1| nbeal1, putative [Ixod (1960) 168 49.8 0.0011 gi|115681472|ref|XP_785921.2| PREDICTED: hypotheti (3355) 169 50.2 0.0014 gi|244238|gb|AAB21258.1| YCR591 [Saccharomyces cer ( 408) 159 47.1 0.0015 gi|167878726|gb|EDS42109.1| beach protein [Culex q ( 879) 159 47.3 0.0028 gi|220970879|gb|EED89215.1| predicted protein [Tha ( 329) 152 45.3 0.0042 gi|108882503|gb|EAT46728.1| conserved hypothetical ( 884) 156 46.6 0.0047 gi|4806|emb|CAA41798.1| YCR591 [Saccharomyces cere (1833) 159 47.6 0.0049 >>gi|18676420|dbj|BAB84862.1| FLJ00082 protein [Homo sap (71 aa) initn: 482 init1: 482 opt: 482 Z-score: 668.9 bits: 127.6 E(): 1.5e-28 Smith-Waterman score: 482; 100.000% identity (100.000% similar) in 71 aa overlap (1-71:1-71) 10 20 30 40 50 60 FLJ000 GWAVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GWAVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQ 10 20 30 40 50 60 70 FLJ000 TPCQLLKVRPA ::::::::::: gi|186 TPCQLLKVRPA 70 >>gi|194373603|dbj|BAG56897.1| unnamed protein product [ (588 aa) initn: 222 init1: 222 opt: 222 Z-score: 303.2 bits: 63.0 E(): 3.5e-08 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:139-173) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|194 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 110 120 130 140 150 160 70 FLJ000 CQLLKVRPA ::::: gi|194 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR 170 180 190 200 210 220 >>gi|194376146|dbj|BAG62832.1| unnamed protein product [ (697 aa) initn: 222 init1: 222 opt: 222 Z-score: 302.1 bits: 63.1 E(): 4e-08 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:248-282) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|194 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 220 230 240 250 260 270 70 FLJ000 CQLLKVRPA ::::: gi|194 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR 280 290 300 310 320 330 >>gi|73909153|gb|AAH60874.2| NBEAL2 protein [Homo sapien (973 aa) initn: 250 init1: 222 opt: 222 Z-score: 300.0 bits: 63.2 E(): 5.2e-08 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:524-558) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|739 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 500 510 520 530 540 550 70 FLJ000 CQLLKVRPA ::::: gi|739 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR 560 570 580 590 600 610 >>gi|37182034|gb|AAQ88820.1| SQFE253 [Homo sapiens] (1003 aa) initn: 250 init1: 222 opt: 222 Z-score: 299.8 bits: 63.2 E(): 5.3e-08 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:584-618) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|371 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 560 570 580 590 600 610 70 FLJ000 CQLLKVRPA ::::: gi|371 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVTVSASGLLGTHSWLP 620 630 640 650 660 670 >>gi|148677062|gb|EDL09009.1| mCG146094 [Mus musculus] (448 aa) initn: 217 init1: 217 opt: 217 Z-score: 298.1 bits: 61.7 E(): 6.7e-08 Smith-Waterman score: 217; 91.429% identity (97.143% similar) in 35 aa overlap (33-67:117-151) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . ::::::::.::::::::::::::::::: gi|148 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVADERERKALEGIISNFGQTP 90 100 110 120 130 140 70 FLJ000 CQLLKVRPA ::::: gi|148 CQLLKEPHPPRLSAEEAANRLARLDTNSPSIFQNLNQLKAFFAEVVSEAVPLVLALVPHR 150 160 170 180 190 200 >>gi|119585205|gb|EAW64801.1| hCG15426, isoform CRA_a [H (1554 aa) initn: 250 init1: 222 opt: 222 Z-score: 297.1 bits: 63.3 E(): 7.6e-08 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:1414-1448) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|119 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 1390 1400 1410 1420 1430 1440 70 FLJ000 CQLLKVRPA ::::: gi|119 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR 1450 1460 1470 1480 1490 1500 >>gi|119585207|gb|EAW64803.1| hCG15426, isoform CRA_c [H (2040 aa) initn: 250 init1: 222 opt: 222 Z-score: 295.4 bits: 63.4 E(): 9.4e-08 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:1591-1625) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|119 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 1570 1580 1590 1600 1610 1620 70 FLJ000 CQLLKVRPA ::::: gi|119 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR 1630 1640 1650 1660 1670 1680 >>gi|34526553|dbj|BAC85154.1| FLJ00341 protein [Homo sap (2760 aa) initn: 250 init1: 222 opt: 222 Z-score: 293.5 bits: 63.5 E(): 1.2e-07 Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:2311-2345) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . :::::::::::::::::::::::::::: gi|345 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP 2290 2300 2310 2320 2330 2340 70 FLJ000 CQLLKVRPA ::::: gi|345 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR 2350 2360 2370 2380 2390 2400 >>gi|73985939|ref|XP_541900.2| PREDICTED: similar to CG1 (2305 aa) initn: 217 init1: 217 opt: 217 Z-score: 287.9 bits: 62.2 E(): 2.5e-07 Smith-Waterman score: 217; 91.429% identity (97.143% similar) in 35 aa overlap (33-67:1834-1868) 10 20 30 40 50 60 FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP . ::::::::.::::::::::::::::::: gi|739 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVVDERERKALEGIISNFGQTP 1810 1820 1830 1840 1850 1860 70 FLJ000 CQLLKVRPA ::::: gi|739 CQLLKEPHPARLSAEEAAQRLARLDTNSPSIFQHLDQLKAFFAEVISEGVPLVLAVVPHR 1870 1880 1890 1900 1910 1920 71 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 20:29:34 2009 done: Fri Feb 27 20:33:09 2009 Total Scan time: 455.380 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]