# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00082.fasta.huge -Q ../query/FLJ00082.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00082, 71 aa
vs ./tmplib.10216 library
2210923 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.4344+/-0.0032; mu= 13.9589+/- 0.217
mean_var=56.0099+/-11.864, 0's: 0 Z-trim: 7 B-trim: 0 in 0/40
Lambda= 0.171373
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA0540 ( 2041 res) pg00116 (2041) 222 62.9 4e-11
FLJ00341 ( 2760 res) sf00005 (2760) 222 63.1 4.8e-11
KIAA1544 ( 1028 res) fh02556 (1028) 128 39.3 0.00027
FLJ00111 ( 334 res) as00111 ( 334) 104 32.7 0.0084
KIAA1607 ( 1270 res) fj11118 (1270) 104 33.5 0.018
FLJ00156 ( 1887 res) sh06477 (1887) 104 33.7 0.023
KIAA0993 ( 1556 res) bf03014 (1556) 101 32.9 0.035
FLJ00230 ( 414 res) sj06557 ( 414) 74 25.4 1.6
KIAA2013 ( 730 res) bm04064 ( 730) 72 25.2 3.2
KIAA2002 ( 764 res) bf00111 ( 764) 68 24.3 6.5
KIAA1606 ( 1095 res) fj10873 (1095) 69 24.7 6.8
FLJ00268 ( 695 res) sj05723 ( 695) 65 23.5 10
KIAA1237 ( 1268 res) fh09696s1 (1268) 66 24.1 12
KIAA0779 ( 320 res) hk05356 ( 320) 61 22.0 13
KIAA1228 ( 843 res) fh05620s1 ( 843) 64 23.4 14
KIAA1146 ( 271 res) hg00368 ( 271) 60 21.7 14
KIAA0495 ( 209 res) hg00106 ( 209) 59 21.3 14
KIAA1845 ( 705 res) fg05317(revised) ( 705) 63 23.0 15
FLJ00353 ( 1766 res) sh01144 (1766) 66 24.3 15
KIAA0491 ( 391 res) ha02617 ( 391) 59 21.7 21
KIAA1643 ( 993 res) hh10131(revised) ( 993) 62 23.0 21
KIAA1652 ( 179 res) hg02500 ( 179) 56 20.5 22
KIAA1171 ( 595 res) hh05501s1 ( 595) 60 22.2 22
KIAA1369 ( 653 res) fj03222 ( 653) 60 22.2 23
FLJ00392 ( 274 res) sj05126 ( 274) 57 21.0 24
FLJ00077 ( 278 res) as00077 ( 278) 57 21.0 24
KIAA1356 ( 519 res) fj01605 ( 519) 59 21.8 24
FLJ00307 ( 452 res) sh05777 ( 452) 58 21.5 26
KIAA1783 ( 1560 res) fg01285 (1560) 62 23.2 28
KIAA0536 ( 1028 res) hg03863 (1028) 60 22.5 30
KIAA1986 ( 334 res) pg00636 ( 334) 56 20.8 31
KIAA1096 ( 1919 res) pf00402 (1919) 62 23.3 31
KIAA1204 ( 1445 res) fg03451 (1445) 61 22.9 31
KIAA1746 ( 1098 res) pj01729 (1098) 60 22.5 32
FLJ00089 ( 349 res) as00089 ( 349) 56 20.9 32
KIAA0863 ( 1181 res) hk06535 (1181) 60 22.6 33
KIAA1675 ( 1286 res) ae00102 (1286) 60 22.6 35
KIAA1134 ( 611 res) hj00883 ( 611) 57 21.4 37
KIAA0950 ( 343 res) hj05289 ( 343) 55 20.6 37
KIAA0683 ( 844 res) fk02589 ( 844) 58 21.9 38
FLJ00238 ( 204 res) sj07412 ( 204) 53 19.8 39
KIAA1579 ( 704 res) fj04678 ( 704) 57 21.5 41
KIAA1566 ( 1313 res) fh21445 (1313) 59 22.4 42
KIAA1716 ( 804 res) hj06603 ( 804) 57 21.6 44
KIAA1998 ( 607 res) bf00063 ( 607) 56 21.2 44
KIAA0450 ( 1182 res) hj05822 (1182) 58 22.1 46
FLJ00303 ( 370 res) sh05016 ( 370) 54 20.4 46
KIAA1758 ( 1662 res) fh20539(revised) (1662) 59 22.5 48
KIAA1074 ( 1715 res) hj06637 (1715) 59 22.5 49
KIAA0726 ( 973 res) hk02972 ( 973) 57 21.7 49
>>KIAA0540 ( 2041 res) pg00116 (2041 aa)
initn: 250 init1: 222 opt: 222 Z-score: 293.0 bits: 62.9 E(): 4e-11
Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:1592-1626)
10 20 30 40 50 60
FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP
. ::::::::::::::::::::::::::::
KIAA05 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP
1570 1580 1590 1600 1610 1620
70
FLJ000 CQLLKVRPA
:::::
KIAA05 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR
1630 1640 1650 1660 1670 1680
>>FLJ00341 ( 2760 res) sf00005 (2760 aa)
initn: 250 init1: 222 opt: 222 Z-score: 291.6 bits: 63.1 E(): 4.8e-11
Smith-Waterman score: 222; 94.286% identity (97.143% similar) in 35 aa overlap (33-67:2311-2345)
10 20 30 40 50 60
FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP
. ::::::::::::::::::::::::::::
FLJ003 HLHEWIDLIFGYKQRGPAAEEALNVFYYCTYEGAVDLDHVTDERERKALEGIISNFGQTP
2290 2300 2310 2320 2330 2340
70
FLJ000 CQLLKVRPA
:::::
FLJ003 CQLLKEPHPTRLSAEEAAHRLARLDTNSPSIFQHLDELKAFFAEVVSDGVPLVLALVPHR
2350 2360 2370 2380 2390 2400
>>KIAA1544 ( 1028 res) fh02556 (1028 aa)
initn: 126 init1: 126 opt: 128 Z-score: 170.6 bits: 39.3 E(): 0.00027
Smith-Waterman score: 128; 52.632% identity (78.947% similar) in 38 aa overlap (33-70:605-641)
10 20 30 40 50 60
FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP
. :.:.:: .:: :.:.:. :.::::::
KIAA15 QLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSVNLDSITDPVLREAMEAQIQNFGQTP
580 590 600 610 620 630
70
FLJ000 CQLLKVRPA
::: ..:
KIAA15 SQLL-IEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLPHLT
640 650 660 670 680 690
>>FLJ00111 ( 334 res) as00111 (334 aa)
initn: 90 init1: 90 opt: 104 Z-score: 143.6 bits: 32.7 E(): 0.0084
Smith-Waterman score: 104; 44.186% identity (72.093% similar) in 43 aa overlap (31-71:192-234)
10 20 30 40 50
FLJ000 GWAVRWTPVRARTRSGRVDAEGTQGALTALPAFPGA-VDLDHVTDERERKALEGIISNFG
: : : .::. .:: .... :..::::
FLJ001 VSANLHHWIDLIFGYKQQGPAAVDAVNIFHPYFYGDRMDLSSITDPLIKSTILGFVSNFG
170 180 190 200 210 220
60 70
FLJ000 QTPCQLL-KVRPA
:.: ::. : .::
FLJ001 QVPKQLFTKPHPARTAAGKPLPGKDVSTPVSLPGHPQPFFYSLQSLRPSQVTVKGDSLAM
230 240 250 260 270 280
>>KIAA1607 ( 1270 res) fj11118 (1270 aa)
initn: 90 init1: 90 opt: 104 Z-score: 137.5 bits: 33.5 E(): 0.018
Smith-Waterman score: 104; 44.186% identity (72.093% similar) in 43 aa overlap (31-71:864-906)
10 20 30 40 50
FLJ000 GWAVRWTPVRARTRSGRVDAEGTQGALTALPAFPGA-VDLDHVTDERERKALEGIISNFG
: : : .::. .:: .... :..::::
KIAA16 VSANLHHWIDLIFGYKQQGPAAVDAVNIFHPYFYGDRMDLSSITDPLIKSTILGFVSNFG
840 850 860 870 880 890
60 70
FLJ000 QTPCQLL-KVRPA
:.: ::. : .::
KIAA16 QVPKQLFTKPHPARTAAGKPLPGKDVSTPVSLPGHPQPFFYSLQSLRPSQVTVKDMYLFS
900 910 920 930 940 950
>>FLJ00156 ( 1887 res) sh06477 (1887 aa)
initn: 90 init1: 90 opt: 104 Z-score: 135.7 bits: 33.7 E(): 0.023
Smith-Waterman score: 104; 44.186% identity (72.093% similar) in 43 aa overlap (31-71:1489-1531)
10 20 30 40 50
FLJ000 GWAVRWTPVRARTRSGRVDAEGTQGALTALPAFPGA-VDLDHVTDERERKALEGIISNFG
: : : .::. .:: .... :..::::
FLJ001 VSANLHHWIDLIFGYKQQGPAAVDAVNIFHPYFYGDRMDLSSITDPLIKSTILGFVSNFG
1460 1470 1480 1490 1500 1510
60 70
FLJ000 QTPCQLL-KVRPA
:.: ::. : .::
FLJ001 QVPKQLFTKPHPARTAAGKPLPGKDVSTPVSLPGHPQPFFYSLQSLRPSQVTVKDMYLFS
1520 1530 1540 1550 1560 1570
>>KIAA0993 ( 1556 res) bf03014 (1556 aa)
initn: 137 init1: 90 opt: 101 Z-score: 132.6 bits: 32.9 E(): 0.035
Smith-Waterman score: 101; 42.105% identity (71.053% similar) in 38 aa overlap (33-70:966-1002)
10 20 30 40 50 60
FLJ000 AVRWTPVRARTRSGRVDAEGTQGALTALPAFPGAVDLDHVTDERERKALEGIISNFGQTP
. : ::. ...: .. : :.:.:::: :
KIAA09 HLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIP
940 950 960 970 980 990
70
FLJ000 CQLLKVRPA
::.: .:
KIAA09 KQLFK-KPHPPKRVRSRLNGDNAGISVLPGSTSDKIFFHHLDNLRPSLTPVKELKEPVGQ
1000 1010 1020 1030 1040 1050
>>FLJ00230 ( 414 res) sj06557 (414 aa)
initn: 43 init1: 43 opt: 74 Z-score: 102.6 bits: 25.4 E(): 1.6
Smith-Waterman score: 74; 23.077% identity (52.308% similar) in 65 aa overlap (6-68:350-414)
10 20 30
FLJ000 GWAVRWTPVRARTRSGRVDAEGTQGALTAL--PAF
..: :: :. :..: .. ::: : .
FLJ002 QDSEKKRSHSSPSQIPKKILSHMTHEVTEDFSPRDPRTVVGKQDGRGCTSVTTALSLPEL
320 330 340 350 360 370
40 50 60 70
FLJ000 PGAVDLDHVTDERERKALEGIISNFGQTPCQLLKVRPA
. ..: . . . ::.:. : . ..
FLJ002 EREDGKEDISDPMDPNPCSATYSNLGKCKCPISSI
380 390 400 410
>>KIAA2013 ( 730 res) bm04064 (730 aa)
initn: 42 init1: 42 opt: 72 Z-score: 97.3 bits: 25.2 E(): 3.2
Smith-Waterman score: 72; 34.483% identity (53.448% similar) in 58 aa overlap (1-57:27-79)
10 20 30
FLJ000 GWAVRWTPVRARTRSGRVD-AEGTQGALTALPAF
::: : : .: : : : .::. :::
KIAA20 SFDGWRPPRRRRKQGWRLLRRLRRGPGWAPRSGPGSEARAAGPVGWAAGPAAALAPLPAP
10 20 30 40 50 60
40 50 60 70
FLJ000 PGAVDLDHVTDERERKALEGIISNFGQTPCQLLKVRPA
: . : ... :.: :..:.
KIAA20 GGPMWL-----QQRLKGLPGLLSSSWARRLLCLLGLLLLLLWFGGSGARRAAGGLHLLPW
70 80 90 100 110
>>KIAA2002 ( 764 res) bf00111 (764 aa)
initn: 37 init1: 37 opt: 68 Z-score: 91.7 bits: 24.3 E(): 6.5
Smith-Waterman score: 68; 25.862% identity (53.448% similar) in 58 aa overlap (6-61:74-131)
10 20 30
FLJ000 GWAVRWTPVRARTRSGRVDAEGTQGALTAL--PAF
..: :: :. :..: .. ::: : .
KIAA20 QDSEKKRSHSSPSQIPKKILSHMTHEVTEDFSPRDPRTVVGKQDGRGCTSVTTALSLPEL
50 60 70 80 90 100
40 50 60 70
FLJ000 PGAVDLDHVTDERERKALEGIISNFGQTPCQLLKVRPA
. ..: . . . ::.::.
KIAA20 EREDGKEDISDPMDPNPCSATYSNLGQSRAAMIPPKQPRQPKGAVDDAIAFGGKTDQEAP
110 120 130 140 150 160
71 residues in 1 query sequences
2210923 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:32:50 2009 done: Fri Feb 27 10:32:50 2009
Total Scan time: 0.270 Total Display time: 0.020
Function used was FASTA [version 34.26.5 April 26, 2007]