# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00079.fasta.huge -Q ../query/FLJ00079.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00079, 84 aa vs ./tmplib.10216 library 2210910 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 6.6727+/-0.00568; mu= 2.9040+/- 0.382 mean_var=190.7964+/-42.482, 0's: 0 Z-trim: 0 B-trim: 21 in 1/39 Lambda= 0.092852 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1494 ( 638 res) fj08673 ( 638) 121 26.6 1.3 KIAA1311 ( 889 res) fh11512 ( 889) 118 26.4 2.1 KIAA1116 ( 1330 res) hk02574(revised) (1330) 112 25.8 4.7 FLJ00420 ( 613 res) sj09535 ( 613) 101 23.9 8.1 FLJ00353 ( 1766 res) sh01144 (1766) 108 25.4 8.2 KIAA1234 ( 727 res) fh08618 ( 727) 101 24.0 9.1 KIAA0691 ( 762 res) hk03735 ( 762) 101 24.0 9.3 KIAA0058 ( 181 res) ha01532 ( 181) 90 21.7 11 KIAA1205 ( 1217 res) fg03511a (1217) 102 24.4 11 KIAA0595 ( 1666 res) hj02929s1 (1666) 103 24.7 13 KIAA0683 ( 844 res) fk02589 ( 844) 97 23.5 14 KIAA0963 ( 1391 res) hj05936 (1391) 100 24.2 15 KIAA1639 ( 2584 res) af14886 (2584) 104 25.1 15 FLJ00096 ( 208 res) as00096 ( 208) 86 21.3 17 KIAA0381 ( 1114 res) ah04695 (1114) 97 23.7 17 KIAA0244 ( 2044 res) ha04644s1 (2044) 101 24.5 17 KIAA0212 ( 666 res) ha02602 ( 666) 93 22.9 18 KIAA1779 ( 1233 res) hg04229 (1233) 95 23.5 22 FLJ00394 ( 238 res) sj05987 ( 238) 84 21.1 22 KIAA2020 ( 572 res) ph01249 ( 572) 89 22.2 24 KIAA0306 ( 1451 res) hg00063 (1451) 95 23.6 24 KIAA1441 ( 1258 res) hg02860b (1258) 94 23.3 24 KIAA0363 ( 1522 res) hh00103 (1522) 95 23.6 25 KIAA1538 ( 1029 res) fg06773 (1029) 92 23.0 26 FLJ00201 ( 705 res) sj04110 ( 705) 89 22.4 27 FLJ00304 ( 381 res) sh05037 ( 381) 84 21.4 29 KIAA1139 ( 1124 res) hk00330 (1124) 91 22.9 30 KIAA1745 ( 893 res) pj01678 ( 893) 89 22.5 31 KIAA1083 ( 584 res) hj07423 ( 584) 86 21.9 32 KIAA1883 ( 1480 res) fh02249 (1480) 92 23.2 32 FLJ00091 ( 170 res) as00091 ( 170) 77 20.0 34 FLJ00072 ( 204 res) as00072 ( 204) 78 20.2 35 KIAA1014 ( 1050 res) hk02388s2 (1050) 88 22.4 38 FLJ00280 ( 440 res) sh01728 ( 440) 82 21.2 38 KIAA1306 ( 1154 res) fh05845 (1154) 88 22.5 40 FLJ00248 ( 501 res) sj08681 ( 501) 82 21.2 42 KIAA1902 ( 1112 res) hj04383 (1112) 87 22.3 43 KIAA0618 ( 1052 res) hg03971 (1052) 86 22.2 45 KIAA2028 ( 1449 res) hg04183 (1449) 88 22.6 46 KIAA0495 ( 209 res) hg00106 ( 209) 75 19.8 46 KIAA1399 ( 452 res) hk07377 ( 452) 80 20.9 47 KIAA0437 ( 1605 res) hj00203s1 (1605) 88 22.7 49 KIAA0269 ( 567 res) ha06751 ( 567) 81 21.2 49 KIAA1743 ( 1036 res) pj01380s1 (1036) 85 22.0 49 FLJ00104 ( 287 res) as00104 ( 287) 76 20.1 51 KIAA0505 ( 200 res) hh00043 ( 200) 73 19.5 54 KIAA1086 ( 902 res) hj08218 ( 902) 83 21.7 54 FLJ00278 ( 176 res) sh01653 ( 176) 72 19.3 55 KIAA1366 ( 550 res) fj02695 ( 550) 79 20.9 58 KIAA1190 ( 174 res) hg03443a ( 174) 71 19.2 60 >>KIAA1494 ( 638 res) fj08673 (638 aa) initn: 148 init1: 59 opt: 121 Z-score: 104.3 bits: 26.6 E(): 1.3 Smith-Waterman score: 121; 35.714% identity (55.714% similar) in 70 aa overlap (16-79:119-188) 10 20 30 40 FLJ000 LVPLCFFPLLQMAVGPPDCPVG-GP-LTFPGR-GSGAGVGTTLTP ::. :: :: .:::. :..:: : KIAA14 AAARISELSGLSCSAPSQVHISTTGLIVTPPPSSPVTTGPSFTFPSDVPYQAALGTLNPP 90 100 110 120 130 140 50 60 70 80 FLJ000 LPPPKMPPPTILSTVP---RQMFSDAGSGDDALDGDDDLVIDIPE :::: . :.:...: . :: : . :. : . KIAA14 LPPPPLLAATVLASTPPGATAAAAAAGMGPRPMAGSTDQIAHLRPQTRPSVYVAIYPYTP 150 160 170 180 190 200 KIAA14 RKEDELELRKGEMFLVFERCQDGWFKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVPM 210 220 230 240 250 260 >>KIAA1311 ( 889 res) fh11512 (889 aa) initn: 100 init1: 100 opt: 118 Z-score: 100.5 bits: 26.4 E(): 2.1 Smith-Waterman score: 118; 36.364% identity (52.727% similar) in 55 aa overlap (8-59:158-211) 10 20 30 FLJ000 LVPLCFFPLLQMAVGPPDCPVGGPLTFPGRGSGAGVG : . : : : :: :: : : : : KIAA13 GNDPLVVDEVALPSMIPFPPPPPGLPPPPPPGMLMPPMPGPGPGPGPGPGPGPGPGPGPG 130 140 150 160 170 180 40 50 60 70 80 FLJ000 TTLTPLPPPK---MPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE .. :: :. .:::... .:: KIAA13 HSMR-LPVPQGHGQPPPSVVLPIPRPPITQSSLINSRDQPGTSAVPNLASVGTRLPPPLP 190 200 210 220 230 240 >>KIAA1116 ( 1330 res) hk02574(revised) (1330 aa) initn: 205 init1: 80 opt: 112 Z-score: 94.2 bits: 25.8 E(): 4.7 Smith-Waterman score: 112; 39.062% identity (51.562% similar) in 64 aa overlap (1-61:713-774) 10 20 FLJ000 LVPLCFFPLLQMAVGPPD-CPVGGP--LTF ::: : :. .: : :: :. : : KIAA11 ETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAF-PV-SMPVPPPGFSPIPPPPFLRA 690 700 710 720 730 740 30 40 50 60 70 80 FLJ000 PGRGSGAGVGTTLTPLPPPKMPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE : : :.::: .::::: .:: .. KIAA11 SFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGS 750 760 770 780 790 800 KIAA11 VASNLATSALPAGNVFNAPTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGG 810 820 830 840 850 860 >>FLJ00420 ( 613 res) sj09535 (613 aa) initn: 149 init1: 64 opt: 101 Z-score: 90.0 bits: 23.9 E(): 8.1 Smith-Waterman score: 101; 35.088% identity (57.895% similar) in 57 aa overlap (20-74:401-448) 10 20 30 40 FLJ000 LVPLCFFPLLQMAVGPPDCPVGGPLTFPGRGSGAGVGTTLTPLP--PPK :.:. . :: :...: . :.::: ::. FLJ004 GNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPS 380 390 400 410 420 430 50 60 70 80 FLJ000 MPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE : :. :::: .. :.: FLJ004 SPTPS---------FSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLKSMAERAAISSGIE 440 450 460 470 480 >>FLJ00353 ( 1766 res) sh01144 (1766 aa) initn: 343 init1: 81 opt: 108 Z-score: 90.0 bits: 25.4 E(): 8.2 Smith-Waterman score: 108; 36.207% identity (55.172% similar) in 58 aa overlap (8-58:184-241) 10 20 30 FLJ000 LVPLCFFPLLQMAVGPPDCPVG-GPLTFPGRGSGAGV : . : ::. :.. : .: :.:: FLJ003 PPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGP 160 170 180 190 200 210 40 50 60 70 80 FLJ000 GTTLTPL------PPPKMPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE .: : ::: .:::.. ::.: FLJ003 PPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIPPQLT 220 230 240 250 260 270 >>KIAA1234 ( 727 res) fh08618 (727 aa) initn: 68 init1: 45 opt: 101 Z-score: 89.2 bits: 24.0 E(): 9.1 Smith-Waterman score: 101; 31.507% identity (47.945% similar) in 73 aa overlap (3-74:509-577) 10 20 30 FLJ000 LVPLCFFPLLQMAVGPPDCPVGGPLTFPGRGS ::: :: .. . : : : :: KIAA12 ISHPPSPSPSAYSSRTSRPMRDVGEDQVHPPLCHFPQRSL---QHQLPQPGAQRFATRGY 480 490 500 510 520 530 40 50 60 70 80 FLJ000 GA-GVGTTLTPLPPPKMPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE . .:.:: . ::.: : .: .:.: . : :: KIAA12 PMEDMKLQGVPMPPGDLCGPTLLLDVSIKMEKDSGC-EGAADGCVPSQVWLGASDRSHPA 540 550 560 570 580 590 KIAA12 TFPTRMHLKTEPDSRQQVYISHLGHGVRGAQPHGRATAGRSRELTPFHPAHCACLEPTDG 600 610 620 630 640 650 >>KIAA0691 ( 762 res) hk03735 (762 aa) initn: 126 init1: 64 opt: 101 Z-score: 89.0 bits: 24.0 E(): 9.3 Smith-Waterman score: 101; 35.088% identity (57.895% similar) in 57 aa overlap (20-74:486-533) 10 20 30 40 FLJ000 LVPLCFFPLLQMAVGPPDCPVGGPLTFPGRGSGAGVGTTLTPLP--PPK :.:. . :: :...: . :.::: ::. KIAA06 GNNASSQALGPPSGPHNPPPSTSKEPSAAAPTGAGGVAPGSGNNSGGPSLLVPLPVNPPS 460 470 480 490 500 510 50 60 70 80 FLJ000 MPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE : :. :::: .. :.: KIAA06 SPTPS---------FSDAKAAGALLNGPPQFSTAPEIKAPEPLSSLKSMAERAAISSGIE 520 530 540 550 560 >>KIAA0058 ( 181 res) ha01532 (181 aa) initn: 64 init1: 64 opt: 90 Z-score: 87.9 bits: 21.7 E(): 11 Smith-Waterman score: 90; 35.849% identity (52.830% similar) in 53 aa overlap (2-50:100-147) 10 20 30 FLJ000 LVPLCFFPLLQMAVGPPDCPVGGPLTFPGRG .:. ..: ::: : . :. : KIAA00 TVPTMSAAFPGASLYLPMAQSVAVGPLGSTIPMAYYP-----VGPIYPPGSTVLVEGGYD 70 80 90 100 110 120 40 50 60 70 80 FLJ000 SGA--GVGTTL--TPLPPPKMPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE .:: :.:.: : ::: :: KIAA00 AGARFGAGATAGNIPPPPPGCPPNAAQLAVMQGANVLVTQRKGNFFMGGSDGGYTIW 130 140 150 160 170 180 >>KIAA1205 ( 1217 res) fg03511a (1217 aa) initn: 109 init1: 77 opt: 102 Z-score: 87.4 bits: 24.4 E(): 11 Smith-Waterman score: 102; 44.186% identity (51.163% similar) in 43 aa overlap (15-51:602-644) 10 20 30 40 FLJ000 LVPLCFFPLLQMAVGPPDCP---VGGPLTFPGRGSGAGVGTTLT ::: : : :: .:: :. . :: KIAA12 NRDLQESISSAISALDDPPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEP 580 590 600 610 620 630 50 60 70 80 FLJ000 PL---PPPKMPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE :: :: ::: KIAA12 PLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMP 640 650 660 670 680 690 >>KIAA0595 ( 1666 res) hj02929s1 (1666 aa) initn: 232 init1: 69 opt: 103 Z-score: 86.6 bits: 24.7 E(): 13 Smith-Waterman score: 103; 30.137% identity (46.575% similar) in 73 aa overlap (3-67:959-1023) 10 20 FLJ000 LVPLCFFPLLQMAVGPPDCPVG--------GP : : : .:: ::. :: KIAA05 PHVSPSGYPCLPPPPTVPLVSGTPGAYAVPPTCSVPW-----APPPAPVSPYSSTCTYGP 930 940 950 960 970 980 30 40 50 60 70 80 FLJ000 LTFPGRGSGAGVGTTLTPLPPPKMPPPTILSTVPRQMFSDAGSGDDALDGDDDLVIDIPE : : : : . . .::: .:: .: .::. . . :. KIAA05 L---GWGPGPQHAPFWSTVPPPPLPPASIGRAVPQPKMESRGTPAGPPENVLPLSMAPPL 990 1000 1010 1020 1030 1040 KIAA05 SLGLPGHGAPQTEPTKVEVKPVPASPHPKHKVSALVQSPQMKALACVSAEGVTVEEPASE 1050 1060 1070 1080 1090 1100 84 residues in 1 query sequences 2210910 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:48 2009 done: Fri Feb 27 10:32:48 2009 Total Scan time: 0.280 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]