# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00078.fasta.nr -Q ../query/FLJ00078.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00078, 103 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826732 sequences Expectation_n fit: rho(ln(x))= 4.4201+/-0.000178; mu= 7.8018+/- 0.010 mean_var=56.6040+/-11.312, 0's: 43 Z-trim: 46 B-trim: 2896 in 1/66 Lambda= 0.170471 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676412|dbj|BAB84858.1| FLJ00078 protein [Homo ( 103) 650 167.1 4.1e-40 gi|109119804|ref|XP_001115945.1| PREDICTED: simila ( 112) 633 163.0 8e-39 gi|193785331|dbj|BAG54484.1| unnamed protein produ ( 229) 515 134.2 7.4e-30 gi|193785406|dbj|BAG54559.1| unnamed protein produ ( 509) 515 134.5 1.4e-29 gi|15451366|dbj|BAB64487.1| hypothetical protein [ ( 195) 509 132.7 1.8e-29 gi|22651773|gb|AAM80558.1| vanilloid receptor like ( 765) 515 134.6 1.8e-29 gi|119610911|gb|EAW90505.1| transient receptor pot ( 765) 515 134.6 1.8e-29 gi|219517781|gb|AAI43295.1| Unknown (protein for M ( 774) 515 134.6 1.9e-29 gi|219517783|gb|AAI43300.1| Unknown (protein for M ( 775) 515 134.6 1.9e-29 gi|62901456|sp|Q8NET8.2|TRPV3_HUMAN RecName: Full= ( 790) 515 134.6 1.9e-29 gi|119610909|gb|EAW90503.1| transient receptor pot ( 790) 515 134.6 1.9e-29 gi|21912412|emb|CAD31711.2| vanilloid receptor-lik ( 790) 515 134.6 1.9e-29 gi|22651775|gb|AAM80559.1| vanilloid receptor like ( 791) 515 134.6 1.9e-29 gi|169798157|gb|ACA81614.1| transient receptor pot ( 791) 515 134.6 1.9e-29 gi|85397374|gb|AAI04867.1| Transient receptor pote ( 791) 515 134.6 1.9e-29 gi|119610910|gb|EAW90504.1| transient receptor pot ( 791) 515 134.6 1.9e-29 gi|73967400|ref|XP_548338.2| PREDICTED: similar to ( 791) 509 133.2 5.3e-29 gi|194217490|ref|XP_001504773.2| PREDICTED: simila ( 791) 508 132.9 6.2e-29 gi|80477994|gb|AAI08985.1| Transient receptor pote ( 790) 501 131.2 2.1e-28 gi|62901449|sp|Q8K424.2|TRPV3_MOUSE RecName: Full= ( 791) 501 131.2 2.1e-28 gi|20908451|gb|AAM33069.1|AF510316_1 TRP ion chann ( 791) 501 131.2 2.1e-28 gi|187465959|emb|CAQ51969.1| transient receptor po ( 791) 501 131.2 2.1e-28 gi|38505501|gb|AAQ90060.1| heat sensitive channel ( 791) 487 127.7 2.2e-27 gi|149641780|ref|XP_001508712.1| PREDICTED: simila ( 789) 482 126.5 5.2e-27 gi|118100263|ref|XP_001235155.1| PREDICTED: simila ( 787) 386 102.9 6.7e-20 gi|149063609|gb|EDM13932.1| transient receptor pot ( 338) 332 89.3 3.5e-16 gi|194214184|ref|XP_001916029.1| PREDICTED: simila ( 687) 333 89.8 5.1e-16 gi|74177416|dbj|BAE34598.1| unnamed protein produc ( 558) 332 89.5 5.1e-16 gi|109098712|ref|XP_001098148.1| PREDICTED: simila ( 722) 333 89.8 5.3e-16 gi|70609370|gb|AAZ04920.1| transient receptor pote ( 764) 333 89.9 5.5e-16 gi|14582398|gb|AAK69487.1|AF279673_1 vanilloid rec ( 803) 333 89.9 5.7e-16 gi|22036052|dbj|BAC06573.1| OTRPC4beta cation chan ( 811) 333 89.9 5.7e-16 gi|119618284|gb|EAW97878.1| transient receptor pot ( 811) 333 89.9 5.7e-16 gi|148687957|gb|EDL19904.1| transient receptor pot ( 655) 332 89.6 5.8e-16 gi|70609366|gb|AAZ04918.1| transient receptor pote ( 824) 333 89.9 5.8e-16 gi|119909364|ref|XP_592740.3| PREDICTED: similar t ( 837) 333 89.9 5.9e-16 gi|70609368|gb|AAZ04919.1| transient receptor pote ( 837) 333 89.9 5.9e-16 gi|27877102|dbj|BAC55864.1| hypothetical protein [ ( 853) 333 89.9 6e-16 gi|62901470|sp|Q9HBA0.2|TRPV4_HUMAN RecName: Full= ( 871) 333 89.9 6.1e-16 gi|192764516|gb|ACF05802.1| transient receptor pot ( 871) 333 89.9 6.1e-16 gi|155964332|gb|ABU40239.1| TRPV4 [Canis lupus fam ( 871) 333 89.9 6.1e-16 gi|11055322|gb|AAG28029.1|AF263523_1 vanilloid rec ( 871) 333 89.9 6.1e-16 gi|15822825|dbj|BAB69040.1| vanilloid receptor lik ( 871) 333 89.9 6.1e-16 gi|119909362|ref|XP_001253150.1| PREDICTED: simila ( 871) 333 89.9 6.1e-16 gi|10304081|gb|AAG16127.1|AF258465_1 OTRPC4 [Homo ( 871) 333 89.9 6.1e-16 gi|14582396|gb|AAK69486.1|AF279672_1 vanilloid rec ( 803) 332 89.6 6.8e-16 gi|190337616|gb|AAI63540.1| Transient receptor pot ( 841) 332 89.6 7e-16 gi|123227302|emb|CAM15567.1| novel protein similar ( 856) 332 89.7 7.1e-16 gi|62901120|sp|Q9ERZ8.1|TRPV4_RAT RecName: Full=Tr ( 871) 332 89.7 7.2e-16 gi|10443637|gb|AAG17543.1|AF208026_1 OTRPC4 cation ( 871) 332 89.7 7.2e-16 >>gi|18676412|dbj|BAB84858.1| FLJ00078 protein [Homo sap (103 aa) initn: 650 init1: 650 opt: 650 Z-score: 876.4 bits: 167.1 E(): 4.1e-40 Smith-Waterman score: 650; 100.000% identity (100.000% similar) in 103 aa overlap (1-103:1-103) 10 20 30 40 50 60 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLFLLITYVILTFVLLLNML :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 KDNKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLFLLITYVILTFVLLLNML 10 20 30 40 50 60 70 80 90 100 FLJ000 IALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSSARGH ::::::::::::::::::::::::::::::::::::::::::: gi|186 IALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSSARGH 70 80 90 100 >>gi|109119804|ref|XP_001115945.1| PREDICTED: similar to (112 aa) initn: 633 init1: 633 opt: 633 Z-score: 853.3 bits: 163.0 E(): 8e-39 Smith-Waterman score: 633; 97.087% identity (99.029% similar) in 103 aa overlap (1-103:10-112) 10 20 30 40 50 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLFLLITYVIL ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLFLLITYVIL 10 20 30 40 50 60 60 70 80 90 100 FLJ000 TFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSSARGH ::::::::::::::::::::::::::::::::::::::::::: :.:::.:: gi|109 TFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGASMGFSSAHGH 70 80 90 100 110 >>gi|193785331|dbj|BAG54484.1| unnamed protein product [ (229 aa) initn: 515 init1: 515 opt: 515 Z-score: 692.2 bits: 134.2 E(): 7.4e-30 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:53-134) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|193 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 30 40 50 60 70 80 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 90 100 110 120 130 140 100 FLJ000 VGASTGLSSARGH gi|193 EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTDFNK 150 160 170 180 190 200 >>gi|193785406|dbj|BAG54559.1| unnamed protein product [ (509 aa) initn: 515 init1: 515 opt: 515 Z-score: 687.5 bits: 134.5 E(): 1.4e-29 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:333-414) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|193 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 310 320 330 340 350 360 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|193 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 370 380 390 400 410 420 100 FLJ000 VGASTGLSSARGH gi|193 EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTDFNK 430 440 450 460 470 480 >>gi|15451366|dbj|BAB64487.1| hypothetical protein [Maca (195 aa) initn: 509 init1: 509 opt: 509 Z-score: 685.2 bits: 132.7 E(): 1.8e-29 Smith-Waterman score: 509; 98.780% identity (100.000% similar) in 82 aa overlap (1-82:18-99) 10 20 30 40 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLF :::.::::::::::::::::::::::::::::::::::::::: gi|154 MPGFTLSSLASLIEKCPKDNNDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLF 10 20 30 40 50 60 50 60 70 80 90 100 FLJ000 LLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSSARGH ::::::::::::::::::::::::::::::::::::::: gi|154 LLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEFEKMLPEWLRSRFR 70 80 90 100 110 120 gi|154 MGELCRVAEEDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTADFNKIQDFSRNNSKTT 130 140 150 160 170 180 >>gi|22651773|gb|AAM80558.1| vanilloid receptor like 3 p (765 aa) initn: 515 init1: 515 opt: 515 Z-score: 685.1 bits: 134.6 E(): 1.8e-29 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:614-695) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|226 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 590 600 610 620 630 640 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|226 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 650 660 670 680 690 700 100 FLJ000 VGASTGLSSARGH gi|226 EKMLPEWLRSXFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTGTVA 710 720 730 740 750 760 >>gi|119610911|gb|EAW90505.1| transient receptor potenti (765 aa) initn: 515 init1: 515 opt: 515 Z-score: 685.1 bits: 134.6 E(): 1.8e-29 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:614-695) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|119 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 590 600 610 620 630 640 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 650 660 670 680 690 700 100 FLJ000 VGASTGLSSARGH gi|119 EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTGTVA 710 720 730 740 750 760 >>gi|219517781|gb|AAI43295.1| Unknown (protein for MGC:1 (774 aa) initn: 515 init1: 515 opt: 515 Z-score: 685.1 bits: 134.6 E(): 1.9e-29 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:598-679) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|219 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 570 580 590 600 610 620 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 630 640 650 660 670 680 100 FLJ000 VGASTGLSSARGH gi|219 EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTDFNK 690 700 710 720 730 740 >>gi|219517783|gb|AAI43300.1| Unknown (protein for MGC:1 (775 aa) initn: 515 init1: 515 opt: 515 Z-score: 685.1 bits: 134.6 E(): 1.9e-29 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:598-679) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|219 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 570 580 590 600 610 620 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|219 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 630 640 650 660 670 680 100 FLJ000 VGASTGLSSARGH gi|219 EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTADFN 690 700 710 720 730 740 >>gi|62901456|sp|Q8NET8.2|TRPV3_HUMAN RecName: Full=Tran (790 aa) initn: 515 init1: 515 opt: 515 Z-score: 684.9 bits: 134.6 E(): 1.9e-29 Smith-Waterman score: 515; 100.000% identity (100.000% similar) in 82 aa overlap (1-82:614-695) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN :::::::::::::::::::::::::::::: gi|629 LHDVLKFLFVYIVFLLGFGVALASLIEKCPKDNKDCSSYGSFSDAVLELFKLTIGLGDLN 590 600 610 620 630 640 40 50 60 70 80 90 FLJ000 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPS :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|629 IQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQRARTILEF 650 660 670 680 690 700 100 FLJ000 VGASTGLSSARGH gi|629 EKMLPEWLRSRFRMGELCKVAEDDFRLCLRINEVKWTEWKTHVSFLNEDPGPVRRTDFNK 710 720 730 740 750 760 103 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 20:07:48 2009 done: Fri Feb 27 20:11:28 2009 Total Scan time: 509.170 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]