# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00078.fasta.huge -Q ../query/FLJ00078.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00078, 103 aa vs ./tmplib.10216 library 2210891 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.4097+/-0.00297; mu= 13.6941+/- 0.202 mean_var=48.0234+/-10.436, 0's: 0 Z-trim: 2 B-trim: 156 in 1/39 Lambda= 0.185075 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1356 ( 519 res) fj01605 ( 519) 94 32.3 0.025 KIAA1616 ( 1017 res) fj13825 (1017) 90 31.6 0.08 FLJ00080 ( 716 res) as00080 ( 716) 77 27.9 0.71 KIAA0668 ( 742 res) hk02329 ( 742) 71 26.3 2.2 KIAA0241 ( 522 res) ha04847 ( 522) 69 25.6 2.6 KIAA0810 ( 824 res) hk05647s1 ( 824) 68 25.6 4.1 KIAA1306 ( 1154 res) fh05845 (1154) 69 26.0 4.2 KIAA0765 ( 952 res) hk04803s1 ( 952) 68 25.7 4.5 KIAA0642 ( 1329 res) hh02837 (1329) 69 26.1 4.6 KIAA0583 ( 1952 res) af01829 (1952) 68 26.1 7.1 KIAA0620 ( 1985 res) hg04174 (1985) 68 26.1 7.2 KIAA0632 ( 727 res) hh01900 ( 727) 62 23.9 12 KIAA1174 ( 430 res) hh05825a ( 430) 60 23.1 12 FLJ00015 ( 307 res) as00015 ( 307) 58 22.4 14 KIAA0599 ( 697 res) hj03137 ( 697) 60 23.4 16 KIAA0659 ( 1049 res) fh22726 (1049) 61 23.9 18 FLJ00242 ( 804 res) sj07550 ( 804) 60 23.4 18 KIAA1450 ( 1139 res) fh12401b (1139) 61 23.9 18 FLJ00201 ( 705 res) sj04110 ( 705) 59 23.1 20 FLJ00203 ( 1154 res) sj04233s1 (1154) 60 23.6 22 KIAA0085 ( 269 res) ha01520 ( 269) 55 21.5 23 KIAA1901 ( 1265 res) hh03635 (1265) 60 23.7 24 KIAA0462 ( 2276 res) hg00891 (2276) 62 24.5 24 KIAA0312 ( 3192 res) ff01724 (3192) 63 25.0 24 KIAA1600 ( 741 res) fj10035s1 ( 741) 58 22.9 25 KIAA0387 ( 1042 res) hj00020s1 (1042) 59 23.3 25 FLJ00258 ( 792 res) sj09927 ( 792) 58 22.9 25 KIAA0233 ( 2035 res) ha04602 (2035) 61 24.2 26 KIAA2005 ( 1587 res) eg01633 (1587) 60 23.8 27 KIAA1434 ( 677 res) hh05877 ( 677) 57 22.6 28 KIAA1149 ( 532 res) fg04087 ( 532) 56 22.2 29 KIAA1093 ( 1727 res) fh18956 (1727) 60 23.9 29 KIAA2013 ( 730 res) bm04064 ( 730) 57 22.6 29 FLJ00328 ( 238 res) sj02853 ( 238) 53 20.9 30 KIAA0877 ( 580 res) hk07357 ( 580) 56 22.2 30 KIAA0881 ( 1064 res) hk07534 (1064) 58 23.1 31 KIAA1442 ( 627 res) hh10127b ( 627) 56 22.2 32 KIAA0616 ( 634 res) hg03623 ( 634) 56 22.2 32 KIAA0537 ( 698 res) hg03925 ( 698) 56 22.3 34 FLJ00006 ( 401 res) as00006 ( 401) 54 21.5 35 FLJ00323 ( 450 res) sj01089 ( 450) 54 21.5 37 KIAA0772 ( 469 res) hk05119 ( 469) 54 21.6 38 FLJ00356 ( 851 res) sh02495 ( 851) 56 22.4 38 KIAA1968 ( 860 res) fk04713 ( 860) 56 22.4 39 FLJ00001 ( 155 res) as00001 ( 155) 50 19.9 40 KIAA0042 ( 1652 res) ha00930 (1652) 58 23.3 40 KIAA0017 ( 1253 res) ha02425 (1253) 57 22.9 41 KIAA0718 ( 742 res) hk01073 ( 742) 55 22.1 42 KIAA0484 ( 97 res) hg00836 ( 97) 48 19.1 43 FLJ00400 ( 782 res) sj07486 ( 782) 55 22.1 44 >>KIAA1356 ( 519 res) fj01605 (519 aa) initn: 88 init1: 88 opt: 94 Z-score: 135.1 bits: 32.3 E(): 0.025 Smith-Waterman score: 94; 26.087% identity (76.087% similar) in 46 aa overlap (30-75:255-300) 10 20 30 40 50 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLNIQQNSKYPILFLFLLITYVILTFVLLLNM ... . : . .:....:.:..:....:: KIAA13 TTSAGWDGLLAPILNSAPPDCDPDTIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNM 230 240 250 260 270 280 60 70 80 90 100 FLJ000 LIALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSSARGH ::.. :. ...:: KIAA13 YIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSDFAAALDPPLL 290 300 310 320 330 340 >>KIAA1616 ( 1017 res) fj13825 (1017 aa) initn: 98 init1: 75 opt: 90 Z-score: 126.0 bits: 31.6 E(): 0.08 Smith-Waterman score: 90; 30.769% identity (84.615% similar) in 39 aa overlap (44-82:402-440) 20 30 40 50 60 70 FLJ000 DAVLELFKLTIGLGDLNIQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSK .. :.... .::.:.:::....: .:.. KIAA16 DPPCGQNETREDGKIIQLPPCKTGAWIVPAIMACYLLVANILLVNLLIAVFNNTFFEVKS 380 390 400 410 420 430 80 90 100 FLJ000 ESERIWRLQVSLGGDPSVGASTGLSSARGH :...:..: KIAA16 ISNQVWKFQRYQLIMTFHERPVLPPPLIIFSHMTMIFQHLCCRWRKHESDPDERDYGLKL 440 450 460 470 480 490 >>FLJ00080 ( 716 res) as00080 (716 aa) initn: 62 init1: 62 opt: 77 Z-score: 109.0 bits: 27.9 E(): 0.71 Smith-Waterman score: 77; 25.926% identity (62.963% similar) in 54 aa overlap (51-102:639-692) 30 40 50 60 70 80 FLJ000 KLTIGLGDLNIQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWR ......:. . . .. .. . :.:: FLJ000 LHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFLPYRAEVRMWR 610 620 630 640 650 660 90 100 FLJ000 LQV--SLGGDPSVGASTGLSSARGH . .::.: . :: :.:::: FLJ000 MGPLPHIGGQPCCSYSTHLGSARGTRCPSCTGLHSGGTANLGAYWLVS 670 680 690 700 710 >>KIAA0668 ( 742 res) hk02329 (742 aa) initn: 51 init1: 51 opt: 71 Z-score: 100.2 bits: 26.3 E(): 2.2 Smith-Waterman score: 71; 41.026% identity (66.667% similar) in 39 aa overlap (60-98:312-349) 30 40 50 60 70 80 FLJ000 NIQQNSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDP : :: .: : .::. :. ::.. :. : KIAA06 PDEGWEARDSSPHFQAEQRVMSRVHSLERRLEALAAEFSSNWQKEAMRLERLELRQGA-P 290 300 310 320 330 340 90 100 FLJ000 SVGASTGLSSARGH . :.. ::: KIAA06 GQGGGGGLSHEDTLALLEGLVSRREAALKEDFRRETAARIQEELSALRAEHQQDSEDLFK 350 360 370 380 390 400 >>KIAA0241 ( 522 res) ha04847 (522 aa) initn: 54 init1: 54 opt: 69 Z-score: 99.0 bits: 25.6 E(): 2.6 Smith-Waterman score: 69; 33.333% identity (61.404% similar) in 57 aa overlap (11-64:94-150) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLG--DLNIQQNSKYP :.. : :: .. .::. :: .. : KIAA02 KLQLITHAYFEEKDFSQISILKELYEHMNSSLGGASLEGSQVYLGLSPRDLVLHFRHKVL 70 80 90 100 110 120 40 50 60 70 80 90 FLJ000 ILFLFLLITYVILTFVLLLNMLI-ALMGETVENVSKESERIWRLQVSLGGDPSVGASTGL ::: ..:. .: .. .: :. ::: KIAA02 ILFKLILLEKKVLFYISPVNKLVGALMTVLSLFPGMIEHGLSDCSQYRPRKSMSEDGGLQ 130 140 150 160 170 180 >>KIAA0810 ( 824 res) hk05647s1 (824 aa) initn: 55 init1: 55 opt: 68 Z-score: 95.3 bits: 25.6 E(): 4.1 Smith-Waterman score: 68; 40.000% identity (66.667% similar) in 30 aa overlap (71-100:63-92) 50 60 70 80 90 100 FLJ000 FLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSSA .:..: :. .:: .:::..: ::: KIAA08 YTYALSSSYSSDALDFETEHKLDPVFDSPRMSRRSLRLATTACTLGDGEAVGADSGTSSA 40 50 60 70 80 90 FLJ000 RGH KIAA08 VSLKNRAARTTKQRRSTNKSAFSINHVSRQVTSSGVSYGGTVSLQDAVTRRPPVLDESWI 100 110 120 130 140 150 >>KIAA1306 ( 1154 res) fh05845 (1154 aa) initn: 66 init1: 66 opt: 69 Z-score: 95.1 bits: 26.0 E(): 4.2 Smith-Waterman score: 69; 28.947% identity (60.526% similar) in 38 aa overlap (65-102:85-122) 40 50 60 70 80 90 FLJ000 SKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGAS : . . : :.:: :. ..: :. KIAA13 DRVGYFPSSLGEAIVKRAGSRAGTEPSLPQGSSSSGPSAPPEEIWVLRKPFAGGDRSGSI 60 70 80 90 100 110 100 FLJ000 TGLSSARGH .:....:: KIAA13 SGMAGGRGSGGHALHAGSEGVKLLATVLSQKSVSESGPGDSPAKPPEGSAGVARSQPPVA 120 130 140 150 160 170 >>KIAA0765 ( 952 res) hk04803s1 (952 aa) initn: 93 init1: 43 opt: 68 Z-score: 94.6 bits: 25.7 E(): 4.5 Smith-Waterman score: 68; 57.143% identity (76.190% similar) in 21 aa overlap (84-103:818-838) 60 70 80 90 100 FLJ000 VLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGAST-GLSSARGH :::: :. :.. ::.:: :: KIAA07 DVPGFGGGPNNLSGPSGFGGGPQNFGNGPGSLGGPPGFGSGPPGLGSAPGHLGGPPAFGP 790 800 810 820 830 840 KIAA07 GPGPGPGPGPIHIGGPPGFASSSGKPGPTVIKVQNMPFTVSIDEILDFFYGYQVIPGSVC 850 860 870 880 890 900 >>KIAA0642 ( 1329 res) hh02837 (1329 aa) initn: 69 init1: 69 opt: 69 Z-score: 94.4 bits: 26.1 E(): 4.6 Smith-Waterman score: 69; 42.424% identity (57.576% similar) in 33 aa overlap (70-102:102-134) 40 50 60 70 80 90 FLJ000 LFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGGDPSVGASTGLSS ..: .: . :: :: ::: : :: KIAA06 LDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGGTVVGAPRGRSS 80 90 100 110 120 130 100 FLJ000 ARGH .:: KIAA06 SRGRGRGRGECGFYQRSFDEVEGVFGRGGGREMHRSQSWEERGDRRFEKPGRKDVGKKNG 140 150 160 170 180 190 >>KIAA0583 ( 1952 res) af01829 (1952 aa) initn: 54 init1: 54 opt: 68 Z-score: 91.1 bits: 26.1 E(): 7.1 Smith-Waterman score: 68; 28.846% identity (61.538% similar) in 52 aa overlap (1-49:1734-1785) 10 20 30 FLJ000 KDNKDCSSYGSFSDAVLELFKLTIGLGDLN ::.:: . .::. . ::. ...:. KIAA05 KDDNSATKTLSAAARRSFFRRKHKHKRSGSKDGKDLLALDAFSSDSIPLFEDSVSLAYQR 1710 1720 1730 1740 1750 1760 40 50 60 70 80 FLJ000 IQQ---NSKYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESERIWRLQVSLGG .:. .. :.:.: :. : KIAA05 VQKVDCTALRPVLILGPLLDVVKEMLVNEAPGKFCRCPLEVMKASQQAIERGVKDCLFVD 1770 1780 1790 1800 1810 1820 103 residues in 1 query sequences 2210891 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:47 2009 done: Fri Feb 27 10:32:47 2009 Total Scan time: 0.290 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]