# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00077.fasta.nr -Q ../query/FLJ00077.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00077, 278 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7819212 sequences Expectation_n fit: rho(ln(x))= 5.1042+/-0.00019; mu= 10.7609+/- 0.011 mean_var=96.2699+/-18.460, 0's: 41 Z-trim: 60 B-trim: 41 in 1/65 Lambda= 0.130716 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440480|dbj|BAB15773.1| FLJ00077 protein [Homo ( 278) 1938 375.1 7.3e-102 gi|487348|gb|AAB60391.1| unknown [Homo sapiens] ( 278) 1927 373.0 3.1e-101 gi|119570138|gb|EAW49753.1| F-box and WD-40 domain ( 593) 1362 266.8 6.1e-69 gi|194041879|ref|XP_001925008.1| PREDICTED: simila ( 592) 1196 235.5 1.6e-59 gi|6164755|gb|AAF04527.1|AF174606_1 F-box protein ( 406) 1063 210.3 4.5e-52 gi|194205743|ref|XP_001916951.1| PREDICTED: simila ( 627) 930 185.4 2.1e-44 gi|194041889|ref|XP_001925453.1| PREDICTED: simila ( 535) 925 184.4 3.7e-44 gi|189054503|dbj|BAG37276.1| unnamed protein produ ( 412) 857 171.4 2.2e-40 gi|13124191|sp|P57775.1|FBXW4_HUMAN RecName: Full= ( 412) 857 171.4 2.2e-40 gi|55961635|emb|CAI12232.1| F-box and WD repeat do ( 412) 851 170.3 4.9e-40 gi|109090346|ref|XP_001110869.1| PREDICTED: simila ( 410) 848 169.7 7.2e-40 gi|73998718|ref|XP_543981.2| PREDICTED: similar to ( 408) 793 159.4 9.5e-37 gi|151553895|gb|AAI49097.1| FBXW4 protein [Bos tau ( 409) 775 156.0 1e-35 gi|6653645|gb|AAF22827.1| FBW4 WD40-containing F-b ( 304) 768 154.5 2e-35 gi|149040273|gb|EDL94311.1| F-box and WD-40 domain ( 408) 746 150.5 4.4e-34 gi|13124215|sp|Q9JMJ2.1|FBXW4_MOUSE RecName: Full= ( 410) 719 145.4 1.5e-32 gi|55961634|emb|CAI12231.1| F-box and WD repeat do ( 212) 633 128.9 7.4e-28 gi|126273481|ref|XP_001379193.1| PREDICTED: simila ( 437) 565 116.4 8.7e-24 gi|114632604|ref|XP_507994.2| PREDICTED: F-box and ( 575) 492 102.8 1.5e-19 gi|118092935|ref|XP_001233793.1| PREDICTED: simila ( 416) 480 100.3 5.7e-19 gi|149412242|ref|XP_001511284.1| PREDICTED: simila ( 401) 443 93.3 6.9e-17 gi|209735514|gb|ACI68626.1| F-box/WD repeat-contai ( 388) 421 89.2 1.2e-15 gi|55961633|emb|CAI12230.1| F-box and WD repeat do ( 191) 414 87.5 1.9e-15 gi|119570136|gb|EAW49751.1| F-box and WD-40 domain ( 325) 414 87.8 2.7e-15 gi|124297679|gb|AAI31842.1| LOC100037117 protein [ ( 417) 411 87.3 4.7e-15 gi|37572560|dbj|BAC98830.1| F-box WD 40 protein [L ( 229) 347 75.0 1.3e-11 gi|7594784|dbj|BAA94667.1| hagoromo [Danio rerio] ( 253) 346 74.8 1.6e-11 gi|37572558|dbj|BAC98829.1| F-box WD40 protein [La ( 389) 348 75.4 1.7e-11 gi|7594780|dbj|BAA94665.1| hagoromo [Danio rerio] ( 392) 346 75.0 2.2e-11 gi|39644763|gb|AAH07380.2| FBXW4 protein [Homo sap ( 293) 260 58.7 1.4e-06 gi|55296892|dbj|BAD68344.1| hypothetical protein [ ( 181) 197 46.6 0.0038 gi|47181360|emb|CAG14472.1| unnamed protein produc ( 253) 193 46.0 0.008 >>gi|10440480|dbj|BAB15773.1| FLJ00077 protein [Homo sap (278 aa) initn: 1938 init1: 1938 opt: 1938 Z-score: 1984.9 bits: 375.1 E(): 7.3e-102 Smith-Waterman score: 1938; 100.000% identity (100.000% similar) in 278 aa overlap (1-278:1-278) 10 20 30 40 50 60 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEARAADGEGGSGPGAEAGARTRPREEAEGGGSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 RGGSEGRGRGREKRARGARRKRKQGGGEARAADGEGGSGPGAEAGARTRPREEAEGGGSV 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 EEGARGIIKGDEGSVGAGKEAQGRKYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EEGARGIIKGDEGSVGAGKEAQGRKYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGT 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 GAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 GAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLW 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 HFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVPVKVSQNWIVGCCREGILLKWRCSQMPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 HFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVPVKVSQNWIVGCCREGILLKWRCSQMPW 190 200 210 220 230 240 250 260 270 FLJ000 MQLEDDALYISQANFILAYQFRPDGASLNRQPLGVCWA :::::::::::::::::::::::::::::::::::::: gi|104 MQLEDDALYISQANFILAYQFRPDGASLNRQPLGVCWA 250 260 270 >>gi|487348|gb|AAB60391.1| unknown [Homo sapiens] (278 aa) initn: 1927 init1: 1927 opt: 1927 Z-score: 1973.7 bits: 373.0 E(): 3.1e-101 Smith-Waterman score: 1927; 99.640% identity (99.640% similar) in 278 aa overlap (1-278:1-278) 10 20 30 40 50 60 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEARAADGEGGSGPGAEAGARTRPREEAEGGGSV :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|487 RGGSEGRGRGREKRARGARRKRKQGGREARAADGEGGSGPGAEAGARTRPREEAEGGGSV 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 EEGARGIIKGDEGSVGAGKEAQGRKYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 EEGARGIIKGDEGSVGAGKEAQGRKYGKEEWRVRARRREGARPGRVQGQGGQVWAYIPGT 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 GAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 GAAMAAAAREEEEEAARESAACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLW 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 HFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVPVKVSQNWIVGCCREGILLKWRCSQMPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|487 HFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVPVKVSQNWIVGCCREGILLKWRCSQMPW 190 200 210 220 230 240 250 260 270 FLJ000 MQLEDDALYISQANFILAYQFRPDGASLNRQPLGVCWA :::::::::::::::::::::::::::::::::::::: gi|487 MQLEDDALYISQANFILAYQFRPDGASLNRQPLGVCWA 250 260 270 >>gi|119570138|gb|EAW49753.1| F-box and WD-40 domain pro (593 aa) initn: 768 init1: 487 opt: 1362 Z-score: 1394.0 bits: 266.8 E(): 6.1e-69 Smith-Waterman score: 1385; 74.828% identity (86.207% similar) in 290 aa overlap (1-275:50-339) 10 20 FLJ000 RGGSEGR-GRGREKRARGARRKRKQGGGEA : .::: .::......: . : ::.. gi|119 GPAPRPLMGSQGRSGPPGNGGPGEGEGGEARKLQEGRVARGKRRKGKGKGKARAGQGGRG 20 30 40 50 60 70 30 40 50 60 70 80 FLJ000 RAADGEGG-------SGPGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEAQ .:.:. : .::::.::::. :::::::: :::::::::.:: :::.::::::: gi|119 SGAEGKPGPQTAKEAAGPGADAGARACPREEAEGGRSVEEGARGIVKGVEGSAGAGKEAQ 80 90 100 110 120 130 90 100 110 120 130 FLJ000 GRKYGK-EEWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAA--REEEEEAARES ::.::: :::::::::::::::::.::.:::.:: : :::.:::::: .:::::::::: gi|119 GREYGKKEEWRVRARRREGARPGRAQGRGGQAWADIAGTGVAMAAAAGEEEEEEEAARES 140 150 160 170 180 190 140 150 160 170 180 190 FLJ000 AACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNS :: :::::::::::: ::: .::::::::::::::: ::: .::.:::: :.:: ::::: gi|119 AARPAAGPALWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNS 200 210 220 230 240 250 200 210 220 230 240 250 FLJ000 GFTRLGTNLMTSVPVK----VSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANF :::::::.:::::::: ::::: .: ::::::::::: ::::::::::.:::::::: gi|119 GFTRLGTDLMTSVPVKERVKVSQNWRLGRCREGILLKWRCRQMPWMQLEDDSLYISQANF 260 270 280 290 300 310 260 270 FLJ000 ILAYQFRPDGASLNRQPLGVCWA :::::::::::::::.:::: gi|119 ILAYQFRPDGASLNRRPLGVFAGHDEDVCHFVLANSHIVSAGGDGKIGIHKIHSTFTVKY 320 330 340 350 360 370 >>gi|194041879|ref|XP_001925008.1| PREDICTED: similar to (592 aa) initn: 646 init1: 601 opt: 1196 Z-score: 1224.8 bits: 235.5 E(): 1.6e-59 Smith-Waterman score: 1197; 67.128% identity (80.969% similar) in 289 aa overlap (1-275:52-338) 10 20 30 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEAR : .:::. .: :: .: :. . .: ..: gi|194 GPAPRPLMGSQGGSGPPGNGGPGEGESGEARKLQEGRA-ARGKRRKGKRKGKAGAGQDGR 30 40 50 60 70 80 40 50 60 70 80 FLJ000 ---------AADGEGGSGPGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEA :. :::: : :.:::::. ::.::::::.. :: :..:.:::.:::::: gi|194 GSGAERKPGATTGEGGCGAGGEAGARAGLGEEGEGGGSVQKXARRIVRGEEGSAGAGKEA 90 100 110 120 130 140 90 100 110 120 130 140 FLJ000 QGRKYGK-EEWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESA .:: :: ::::::. :: :::.:.::.:::.:... ::::::: : ::: :::: . gi|194 EGRDDGKKEEWRVRTGWREEARPARAQGRGGQAWGHLARTGAAMAAEA-AEEEAAAREPT 150 160 170 180 190 150 160 170 180 190 200 FLJ000 ACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSG . ::::::: :::: ::: .::::::.:::::::: ::: .::.:::: :.:: :::::: gi|194 GRPAAGPALLRLPEELLLLICSYLDMQALGRLAQVCRWLRRFTSCDLLWRRIARASLNSG 200 210 220 230 240 250 210 220 230 240 250 FLJ000 FTRLGTNLMTSVPVK----VSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFI ::::::.::.::::: ::::: .: :::::::::::::::::::: :.::::::::: gi|194 FTRLGTDLMASVPVKERVKVSQNWRLGRCREGILLKWRCSQMPWMQLEGDSLYISQANFI 260 270 280 290 300 310 260 270 FLJ000 LAYQFRPDGASLNRQPLGVCWA ::::::::::::::.:::: gi|194 LAYQFRPDGASLNRRPLGVFAGHDEDVCHFVLANSHIISAGGDGKIGVHKIHSTFTVKYS 320 330 340 350 360 370 >>gi|6164755|gb|AAF04527.1|AF174606_1 F-box protein Fbw3 (406 aa) initn: 1063 init1: 1063 opt: 1063 Z-score: 1091.2 bits: 210.3 E(): 4.5e-52 Smith-Waterman score: 1063; 100.000% identity (100.000% similar) in 152 aa overlap (124-275:1-152) 100 110 120 130 140 150 FLJ000 RARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRLP :::::::::::::::::::::::::::::: gi|616 MAAAAREEEEEAARESAACPAAGPALWRLP 10 20 30 160 170 180 190 200 210 FLJ000 EVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 EVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSVP 40 50 60 70 80 90 220 230 240 250 260 270 FLJ000 VKVSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFILAYQFRPDGASLNRQPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|616 VKVSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFILAYQFRPDGASLNRQPL 100 110 120 130 140 150 FLJ000 GVCWA :: gi|616 GVSAGHDEDVCHFVLATSHIVSAGGDGKIGLGKIHSTFAAKYWAHEQEVNCVDCKGGIIS 160 170 180 190 200 210 >>gi|194205743|ref|XP_001916951.1| PREDICTED: similar to (627 aa) initn: 620 init1: 399 opt: 930 Z-score: 953.4 bits: 185.4 E(): 2.1e-44 Smith-Waterman score: 953; 58.667% identity (72.000% similar) in 300 aa overlap (1-275:87-373) 10 FLJ000 RGGSEGRGR-GREKRAR-G---------AR ::: : :: :::..:. : :: gi|194 APRRAGPAAAHGQPGPLGAPRERRARRGRGRGGEETAGREGREREAKEGEGEGESGSRAR 60 70 80 90 100 110 20 30 40 50 60 70 FLJ000 RKRKQGGGEARAADGEGGSGPGAEAGARTRP-REEAEGGGSVEEGARGIIKGDEGSVGAG ::::.:: : ::. .:::: :...:... : ::: : :.. .:: ::: : gi|194 RKRKRGGRAAGAAEDDGGSGAGGRGGSEAGPGREERE--------AEAWMKGREGSRGEL 120 130 140 150 160 80 90 100 110 120 130 FLJ000 KEAQGRKYGKEEWRVRARRREGAR-PG--RVQGQGGQVWAYIPGTGAAMAAAAREEEEEA . :::: :. : .:::.:. :: :.::.: . :. . .:: . . gi|194 RGAQGRGGGQG--RDDGRRRHGVSGPGGGRTQGRGER---RDEGVRHGAHRGARGGHGGG 170 180 190 200 210 220 140 150 160 170 180 FLJ000 AR----ESAAC--PAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLR .: .:.: :::::::::::: ::: .::::::.:::::::: ::: .::.:::: gi|194 GRGGGGDSGAVRRPAAGPALWRLPEELLLLICSYLDMQALGRLAQVCRWLRRFTSCDLLW 230 240 250 260 270 280 190 200 210 220 230 240 FLJ000 RQIAWASLNSGFTRLGTNLMTSVPVK----VSQNWIVGCCREGILLKWRCSQMPWMQLED :.:: ::::::::::::.:: ::::: ::::: .: :::::::::::::::::::: gi|194 RRIARASLNSGFTRLGTDLMPSVPVKERVKVSQNWKLGHCREGILLKWRCSQMPWMQLEG 290 300 310 320 330 340 250 260 270 FLJ000 DALYISQANFILAYQFRPDGASLNRQPLGVCWA :.:::::::::::::::::::::::.:::: gi|194 DSLYISQANFILAYQFRPDGASLNRRPLGVFAGHDEDVCHFVLANSHIISAGGDGKIGIH 350 360 370 380 390 400 >>gi|194041889|ref|XP_001925453.1| PREDICTED: similar to (535 aa) initn: 593 init1: 593 opt: 925 Z-score: 949.1 bits: 184.4 E(): 3.7e-44 Smith-Waterman score: 940; 63.052% identity (79.116% similar) in 249 aa overlap (1-235:52-298) 10 20 30 FLJ000 RGGSEGRGRGREKRARGARRKRKQGGGEAR : .:::. .: :: .: :. . .: ..: gi|194 GPAPRPLMGSQGGSGPPGNGGPGEGESGEARKLQEGRA-ARGKRRKGKRKGKAGAGQDGR 30 40 50 60 70 80 40 50 60 70 80 FLJ000 AADGEG---------GSGPGAEAGARTRPREEAEGGGSVEEGARGIIKGDEGSVGAGKEA .. .:: ..: :::::::. ::.::::::.:::: :..:.:::.:::::: gi|194 GSGAEGKPEPPQAKAAAGLGAEAGARAGLGEEGEGGGSVQEGARRIVRGEEGSAGAGKEA 90 100 110 120 130 140 90 100 110 120 130 140 FLJ000 QGRKYGK-EEWRVRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESA .:: :: ::::::. :: :::.:.::.:::.:... ::::::: : ::: :::: . gi|194 EGRDDGKKEEWRVRTGWREEARPARAQGRGGQAWGHLARTGAAMAAEA-AEEEAAAREPT 150 160 170 180 190 150 160 170 180 190 200 FLJ000 ACPAAGPALWRLPEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSG . ::::::: :::: ::: .::::::.:::::::: ::: .::.:::: :.:: :::::: gi|194 GRPAAGPALLRLPEELLLLICSYLDMQALGRLAQVCRWLRRFTSCDLLWRRIARASLNSG 200 210 220 230 240 250 210 220 230 240 250 FLJ000 FTRLGTNLMTSVPVK----VSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFI ::::::.::.::::: ::::: .: ::::::::::: gi|194 FTRLGTDLMASVPVKERVKVSQNWRLGRCREGILLKWRCRDGKMVFHKIHSTFTVKYSAH 260 270 280 290 300 310 260 270 FLJ000 LAYQFRPDGASLNRQPLGVCWA gi|194 EQEVNCVDCKGGIIVSGSRDRTAKVWPLASGRLGQCLHTIQTEDRVWSIAISPLLSFTYE 320 330 340 350 360 370 >>gi|189054503|dbj|BAG37276.1| unnamed protein product [ (412 aa) initn: 480 init1: 480 opt: 857 Z-score: 881.2 bits: 171.4 E(): 2.2e-40 Smith-Waterman score: 857; 84.076% identity (90.446% similar) in 157 aa overlap (123-275:2-158) 100 110 120 130 140 150 FLJ000 VRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRL : ::. .:::::::::::: :::::::::: gi|189 MAAAAGEEEEEEEAARESAARPAAGPALWRL 10 20 30 160 170 180 190 200 210 FLJ000 PEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSV :: ::: .::::::::::::::: ::: .::.:::: :.:: ::::::::::::.::::: gi|189 PEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGTDLMTSV 40 50 60 70 80 90 220 230 240 250 260 FLJ000 PVK----VSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFILAYQFRPDGASL ::: ::::: .: ::::::::::::::::::::::.::::::::::::::::::::: gi|189 PVKERVKVSQNWRLGRCREGILLKWRCSQMPWMQLEDDSLYISQANFILAYQFRPDGASL 100 110 120 130 140 150 270 FLJ000 NRQPLGVCWA ::.:::: gi|189 NRRPLGVFAGHDEDVCHFVLANSHIVSAGGDGKIGIHKIHSTFTVKYSAHEQEVNCVDCK 160 170 180 190 200 210 >>gi|13124191|sp|P57775.1|FBXW4_HUMAN RecName: Full=F-bo (412 aa) initn: 480 init1: 480 opt: 857 Z-score: 881.2 bits: 171.4 E(): 2.2e-40 Smith-Waterman score: 857; 84.076% identity (90.446% similar) in 157 aa overlap (123-275:2-158) 100 110 120 130 140 150 FLJ000 VRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRL : ::. .:::::::::::: :::::::::: gi|131 MAAAAGEEEEEEEAARESAARPAAGPALWRL 10 20 30 160 170 180 190 200 210 FLJ000 PEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSV :: ::: .::::::::::::::: ::: .::.:::: :.:: ::::::::::::.::::: gi|131 PEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGTDLMTSV 40 50 60 70 80 90 220 230 240 250 260 FLJ000 PVK----VSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFILAYQFRPDGASL ::: ::::: .: ::::::::::::::::::::::.::::::::::::::::::::: gi|131 PVKERVKVSQNWRLGRCREGILLKWRCSQMPWMQLEDDSLYISQANFILAYQFRPDGASL 100 110 120 130 140 150 270 FLJ000 NRQPLGVCWA ::.:::: gi|131 NRRPLGVFAGHDEDVCHFVLANSHIVSAGGDGKIGIHKIHSTFTVKYSAHEQEVNCVDCK 160 170 180 190 200 210 >>gi|55961635|emb|CAI12232.1| F-box and WD repeat domain (412 aa) initn: 480 init1: 480 opt: 851 Z-score: 875.0 bits: 170.3 E(): 4.9e-40 Smith-Waterman score: 851; 83.439% identity (89.809% similar) in 157 aa overlap (123-275:2-158) 100 110 120 130 140 150 FLJ000 VRARRREGARPGRVQGQGGQVWAYIPGTGAAMAAAAREEEEEAARESAACPAAGPALWRL : ::. .:::::::::::: :::::::::: gi|559 MAAAAGEEEEEEEAARESAARPAAGPALWRL 10 20 30 160 170 180 190 200 210 FLJ000 PEVLLLHMCSYLDMRALGRLAQVYRWLWHFTNCDLLRRQIAWASLNSGFTRLGTNLMTSV :: ::: .::::::::::::::: ::: .::.:::: :.:: ::::::::::::.::::: gi|559 PEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNSGFTRLGTDLMTSV 40 50 60 70 80 90 220 230 240 250 260 FLJ000 PVK----VSQNWIVGCCREGILLKWRCSQMPWMQLEDDALYISQANFILAYQFRPDGASL ::: ::::: .: ::::::::::: ::::::::::.::::::::::::::::::::: gi|559 PVKERVKVSQNWRLGRCREGILLKWRCRQMPWMQLEDDSLYISQANFILAYQFRPDGASL 100 110 120 130 140 150 270 FLJ000 NRQPLGVCWA ::.:::: gi|559 NRRPLGVFAGHDEDVCHFVLANSHIVSAGGDGKIGIHKIHSTFTVKYSAHEQEVNCVDCK 160 170 180 190 200 210 278 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 20:02:10 2009 done: Fri Feb 27 20:07:38 2009 Total Scan time: 762.390 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]