# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00075.fasta.nr -Q ../query/FLJ00075.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00075, 183 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827068 sequences Expectation_n fit: rho(ln(x))= 5.0848+/-0.000183; mu= 8.7105+/- 0.010 mean_var=70.7575+/-14.304, 0's: 25 Z-trim: 28 B-trim: 6195 in 2/63 Lambda= 0.152471 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440476|dbj|BAB15771.1| FLJ00075 protein [Homo ( 183) 1303 294.7 4.9e-78 gi|194378622|dbj|BAG63476.1| unnamed protein produ ( 98) 495 116.8 9.7e-25 gi|31874489|emb|CAD97803.1| hypothetical protein [ ( 450) 489 116.0 7.9e-24 gi|158256596|dbj|BAF84271.1| unnamed protein produ ( 264) 464 110.3 2.4e-22 gi|74710313|sp|Q6VEQ5.1|WASH2_HUMAN RecName: Full= ( 264) 464 110.3 2.4e-22 gi|34596577|gb|AAQ76876.1| CXYorf1 [Homo sapiens] ( 264) 464 110.3 2.4e-22 gi|161376492|gb|ABX71508.1| actin nucleation promo ( 407) 464 110.4 3.3e-22 gi|161376478|gb|ABX71501.1| actin nucleation promo ( 407) 464 110.4 3.3e-22 gi|187655928|sp|A8MWX3.1|WASH4_HUMAN RecName: Full ( 477) 464 110.5 3.7e-22 gi|109104367|ref|XP_001094378.1| PREDICTED: simila ( 268) 461 109.7 3.8e-22 gi|109104365|ref|XP_001094494.1| PREDICTED: simila ( 443) 461 109.8 5.6e-22 gi|114659267|ref|XP_001145070.1| PREDICTED: hypoth ( 359) 458 109.1 7.5e-22 gi|28629832|gb|AAO45100.1| unknown [Homo sapiens] ( 261) 456 108.5 7.9e-22 gi|158261197|dbj|BAF82776.1| unnamed protein produ ( 264) 456 108.5 8e-22 gi|114659273|ref|XP_001146306.1| PREDICTED: simila ( 375) 456 108.7 1e-21 gi|114659269|ref|XP_001146140.1| PREDICTED: simila ( 393) 456 108.7 1.1e-21 gi|114659271|ref|XP_001146532.1| PREDICTED: simila ( 397) 456 108.7 1.1e-21 gi|161376496|gb|ABX71510.1| actin nucleation promo ( 410) 456 108.7 1.1e-21 gi|161376494|gb|ABX71509.1| actin nucleation promo ( 410) 456 108.7 1.1e-21 gi|114659263|ref|XP_001146372.1| PREDICTED: simila ( 423) 456 108.7 1.2e-21 gi|114659279|ref|XP_001145978.1| PREDICTED: simila ( 448) 456 108.7 1.2e-21 gi|114659275|ref|XP_001145619.1| PREDICTED: simila ( 455) 456 108.7 1.2e-21 gi|114659265|ref|XP_001146223.1| PREDICTED: simila ( 457) 456 108.7 1.2e-21 gi|167466201|ref|NP_878908.3| WAS protein family h ( 465) 456 108.7 1.2e-21 gi|182702194|sp|A8K0Z3.1|WASH1_HUMAN RecName: Full ( 468) 456 108.7 1.2e-21 gi|114659253|ref|XP_001145900.1| PREDICTED: simila ( 468) 456 108.7 1.2e-21 gi|161376476|gb|ABX71500.1| actin nucleation promo ( 407) 455 108.5 1.3e-21 gi|161376474|gb|ABX71499.1| actin nucleation promo ( 407) 455 108.5 1.3e-21 gi|50949387|emb|CAB70887.2| hypothetical protein [ ( 359) 453 108.0 1.6e-21 gi|161376480|gb|ABX71502.1| actin nucleation promo ( 407) 453 108.0 1.8e-21 gi|161376488|gb|ABX71506.1| actin nucleation promo ( 407) 453 108.0 1.8e-21 gi|161376486|gb|ABX71505.1| actin nucleation promo ( 407) 453 108.0 1.8e-21 gi|161376484|gb|ABX71504.1| actin nucleation promo ( 407) 453 108.0 1.8e-21 gi|206558301|sp|Q9NQA3.2|WASH6_HUMAN RecName: Full ( 264) 448 106.8 2.7e-21 gi|162318008|gb|AAI56860.1| WAS protein family hom ( 264) 447 106.6 3.1e-21 gi|169216741|ref|XP_377073.3| PREDICTED: hypotheti ( 447) 448 107.0 4.1e-21 gi|194211571|ref|XP_001493235.2| PREDICTED: WAS pr ( 472) 447 106.8 4.9e-21 gi|161376482|gb|ABX71503.1| actin nucleation promo ( 407) 442 105.6 9.4e-21 gi|73997805|ref|XP_543873.2| PREDICTED: similar to ( 471) 436 104.3 2.6e-20 gi|157279137|gb|AAI53262.1| LOC533602 protein [Bos ( 471) 433 103.7 4.2e-20 gi|148706377|gb|EDL38324.1| open reading frame 19, ( 338) 431 103.1 4.4e-20 gi|148706378|gb|EDL38325.1| open reading frame 19, ( 360) 431 103.1 4.6e-20 gi|148706379|gb|EDL38326.1| open reading frame 19, ( 449) 431 103.2 5.4e-20 gi|18073522|emb|CAC83096.1| hypothetical protein [ ( 475) 431 103.2 5.7e-20 gi|74181690|dbj|BAE32561.1| unnamed protein produc ( 506) 431 103.3 6e-20 gi|126340223|ref|XP_001373044.1| PREDICTED: hypoth ( 467) 425 101.9 1.4e-19 gi|75517615|gb|AAI01889.1| ORF19 protein [Rattus n ( 287) 410 98.5 9.5e-19 gi|187469027|gb|AAI66761.1| ORF19 protein [Rattus ( 475) 411 98.8 1.2e-18 gi|149580593|ref|XP_001517605.1| PREDICTED: simila ( 495) 397 95.8 1e-17 gi|53131671|emb|CAG31837.1| hypothetical protein [ ( 476) 380 92.0 1.4e-16 >>gi|10440476|dbj|BAB15771.1| FLJ00075 protein [Homo sap (183 aa) initn: 1303 init1: 1303 opt: 1303 Z-score: 1557.2 bits: 294.7 E(): 4.9e-78 Smith-Waterman score: 1303; 100.000% identity (100.000% similar) in 183 aa overlap (1-183:1-183) 10 20 30 40 50 60 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK 130 140 150 160 170 180 FLJ000 MGY ::: gi|104 MGY >>gi|194378622|dbj|BAG63476.1| unnamed protein product [ (98 aa) initn: 495 init1: 495 opt: 495 Z-score: 600.4 bits: 116.8 E(): 9.7e-25 Smith-Waterman score: 521; 61.783% identity (61.783% similar) in 157 aa overlap (27-183:1-98) 10 20 30 40 50 60 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW ::::::::::::::::::::::::::: gi|194 MLGAETEEKLFDAPLSISKREQLEQQV------- 10 20 70 80 90 100 110 120 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP :::::::: gi|194 ----------------------------------------------------PENYFYVP 30 130 140 150 160 170 180 FLJ000 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|194 DLGQVPEIDVPSYLPDLSGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK 40 50 60 70 80 90 FLJ000 MGY ::: gi|194 MGY >>gi|31874489|emb|CAD97803.1| hypothetical protein [Homo (450 aa) initn: 489 init1: 489 opt: 489 Z-score: 584.0 bits: 116.0 E(): 7.9e-24 Smith-Waterman score: 638; 65.341% identity (65.909% similar) in 176 aa overlap (8-183:193-309) 10 20 30 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLF :::::::::::::::::::::::::::::: gi|318 EDDAEEGLGGLPSNISSVSSLLLFNTTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLF 170 180 190 200 210 220 40 50 60 70 80 90 FLJ000 DAPLSISKREQLEQQVGGAGQRWRQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPC :::::::::::::::: gi|318 DAPLSISKREQLEQQV-------------------------------------------- 230 100 110 120 130 140 150 FLJ000 RSLSPLTCPCLILQVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS :::.::::::::::::::::::::: ::::::::::::::::::: gi|318 ---------------PENHFYVPDLGQVPEIDVPSYLPDLSGIANDLMYIADLGPGIAPS 240 250 260 270 280 160 170 180 FLJ000 APGTIPELPTFHTEVAEPLKTYKMGY :::::::::::::::::::::::::: gi|318 APGTIPELPTFHTEVAEPLKTYKMGYLTAPPPPPPPPPAPEVLASASPLPPSTAAPVGQG 290 300 310 320 330 340 >>gi|158256596|dbj|BAF84271.1| unnamed protein product [ (264 aa) initn: 464 init1: 464 opt: 464 Z-score: 557.5 bits: 110.3 E(): 2.4e-22 Smith-Waterman score: 490; 60.927% identity (60.927% similar) in 151 aa overlap (27-177:1-92) 10 20 30 40 50 60 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW ::::::::::::::::::::::::::: gi|158 MLGAETEEKLFDAPLSISKREQLEQQV------- 10 20 70 80 90 100 110 120 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP :::::::: gi|158 ----------------------------------------------------PENYFYVP 30 130 140 150 160 170 180 FLJ000 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKADL 40 50 60 70 80 90 FLJ000 MGY gi|158 QDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSTSPSVQGAPREVV 100 110 120 130 140 150 >>gi|74710313|sp|Q6VEQ5.1|WASH2_HUMAN RecName: Full=WAS (264 aa) initn: 464 init1: 464 opt: 464 Z-score: 557.5 bits: 110.3 E(): 2.4e-22 Smith-Waterman score: 490; 60.927% identity (60.927% similar) in 151 aa overlap (27-177:1-92) 10 20 30 40 50 60 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW ::::::::::::::::::::::::::: gi|747 MLGAETEEKLFDAPLSISKREQLEQQV------- 10 20 70 80 90 100 110 120 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP :::::::: gi|747 ----------------------------------------------------PENYFYVP 30 130 140 150 160 170 180 FLJ000 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKVDL 40 50 60 70 80 90 FLJ000 MGY gi|747 QDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVV 100 110 120 130 140 150 >>gi|34596577|gb|AAQ76876.1| CXYorf1 [Homo sapiens] (264 aa) initn: 464 init1: 464 opt: 464 Z-score: 557.5 bits: 110.3 E(): 2.4e-22 Smith-Waterman score: 490; 60.927% identity (60.927% similar) in 151 aa overlap (27-177:1-92) 10 20 30 40 50 60 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW ::::::::::::::::::::::::::: gi|345 MLGAETEEKLFDAPLSISKREQLEQQV------- 10 20 70 80 90 100 110 120 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP :::::::: gi|345 ----------------------------------------------------PENYFYVP 30 130 140 150 160 170 180 FLJ000 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|345 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKADL 40 50 60 70 80 90 FLJ000 MGY gi|345 QDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSTSPSVQGAPREVV 100 110 120 130 140 150 >>gi|161376492|gb|ABX71508.1| actin nucleation promoting (407 aa) initn: 464 init1: 464 opt: 464 Z-score: 554.9 bits: 110.4 E(): 3.3e-22 Smith-Waterman score: 613; 65.294% identity (65.294% similar) in 170 aa overlap (8-177:128-238) 10 20 30 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLF :::::::::::::::::::::::::::::: gi|161 EDDAEEGLGGLPSNISSVSSLLLFNTTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLF 100 110 120 130 140 150 40 50 60 70 80 90 FLJ000 DAPLSISKREQLEQQVGGAGQRWRQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPC :::::::::::::::: gi|161 DAPLSISKREQLEQQV-------------------------------------------- 160 170 100 110 120 130 140 150 FLJ000 RSLSPLTCPCLILQVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS ::::::::::::::::::::::::::::::::::::::::::::: gi|161 ---------------PENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS 180 190 200 210 160 170 180 FLJ000 APGTIPELPTFHTEVAEPLKTYKMGY :::::::::::::::::::: gi|161 APGTIPELPTFHTEVAEPLKADLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQ 220 230 240 250 260 270 >>gi|161376478|gb|ABX71501.1| actin nucleation promoting (407 aa) initn: 464 init1: 464 opt: 464 Z-score: 554.9 bits: 110.4 E(): 3.3e-22 Smith-Waterman score: 613; 65.294% identity (65.294% similar) in 170 aa overlap (8-177:128-238) 10 20 30 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLF :::::::::::::::::::::::::::::: gi|161 EDDAEEGLGGLPSNISSVSSLLLFNTTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLF 100 110 120 130 140 150 40 50 60 70 80 90 FLJ000 DAPLSISKREQLEQQVGGAGQRWRQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPC :::::::::::::::: gi|161 DAPLSISKREQLEQQV-------------------------------------------- 160 170 100 110 120 130 140 150 FLJ000 RSLSPLTCPCLILQVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS ::::::::::::::::::::::::::::::::::::::::::::: gi|161 ---------------PENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS 180 190 200 210 160 170 180 FLJ000 APGTIPELPTFHTEVAEPLKTYKMGY :::::::::::::::::::: gi|161 APGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQ 220 230 240 250 260 270 >>gi|187655928|sp|A8MWX3.1|WASH4_HUMAN RecName: Full=Put (477 aa) initn: 464 init1: 464 opt: 464 Z-score: 554.0 bits: 110.5 E(): 3.7e-22 Smith-Waterman score: 613; 65.294% identity (65.294% similar) in 170 aa overlap (8-177:196-306) 10 20 30 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLF :::::::::::::::::::::::::::::: gi|187 EDDAEEGLGGLPSNISSVSSLLLFNTTENLYKKYVFLDPLAGAVTKTHVMLGAETEEKLF 170 180 190 200 210 220 40 50 60 70 80 90 FLJ000 DAPLSISKREQLEQQVGGAGQRWRQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPC :::::::::::::::: gi|187 DAPLSISKREQLEQQV-------------------------------------------- 230 240 100 110 120 130 140 150 FLJ000 RSLSPLTCPCLILQVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS ::::::::::::::::::::::::::::::::::::::::::::: gi|187 ---------------PENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPS 250 260 270 280 160 170 180 FLJ000 APGTIPELPTFHTEVAEPLKTYKMGY :::::::::::::::::::: gi|187 APGTIPELPTFHTEVAEPLKVDLQDGVLTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQ 290 300 310 320 330 340 >>gi|109104367|ref|XP_001094378.1| PREDICTED: similar to (268 aa) initn: 461 init1: 461 opt: 461 Z-score: 553.9 bits: 109.7 E(): 3.8e-22 Smith-Waterman score: 487; 60.526% identity (60.526% similar) in 152 aa overlap (27-178:1-93) 10 20 30 40 50 60 FLJ000 PPCRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVGGAGQRW ::::::::::::::::::::::::::: gi|109 MLGAETEEKLFDAPLSISKREQLEQQV------- 10 20 70 80 90 100 110 120 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVP :::::::: gi|109 ----------------------------------------------------PENYFYVP 30 130 140 150 160 170 180 FLJ000 DLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYK :::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: gi|109 DLGQVPEIDVPSYLPDLPGIANDLMYSADLGPGIAPSAPGTIPELPTFHTEVAEPLKTDL 40 50 60 70 80 90 FLJ000 MGY gi|109 QDGVLTAPPPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDNSSSASPSAPVQGAP 100 110 120 130 140 150 183 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 19:51:45 2009 done: Fri Feb 27 19:56:13 2009 Total Scan time: 639.740 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]