# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00075.fasta.huge -Q ../query/FLJ00075.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00075, 183 aa vs ./tmplib.10216 library 2210811 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.8331+/-0.00407; mu= 19.3333+/- 0.276 mean_var=94.2970+/-20.662, 0's: 0 Z-trim: 2 B-trim: 15 in 1/39 Lambda= 0.132076 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0907 ( 569 res) hk10396 ( 569) 105 29.2 0.42 KIAA1116 ( 1330 res) hk02574(revised) (1330) 105 29.8 0.64 KIAA1862 ( 1070 res) aj00563 (1070) 99 28.5 1.3 KIAA0505 ( 200 res) hh00043 ( 200) 88 25.2 2.3 KIAA2019 ( 2797 res) ha06118 (2797) 95 28.4 3.5 KIAA1172 ( 929 res) hj03919(revised) ( 929) 90 26.7 3.9 KIAA1744 ( 855 res) pj01516 ( 855) 89 26.4 4.2 KIAA0718 ( 742 res) hk01073 ( 742) 87 25.9 5.1 KIAA0685 ( 939 res) hk02959 ( 939) 85 25.7 7.6 KIAA1466 ( 505 res) fj01441 ( 505) 81 24.5 9.4 KIAA1740 ( 1119 res) pj00674 (1119) 83 25.5 11 KIAA0131 ( 942 res) ha01235 ( 942) 82 25.2 11 KIAA1308 ( 745 res) fh08652 ( 745) 81 24.8 11 KIAA1965 ( 565 res) pj02601 ( 565) 79 24.2 13 KIAA0790 ( 1319 res) hk05609 (1319) 82 25.4 13 KIAA1886 ( 655 res) fk01837 ( 655) 79 24.3 14 FLJ00221 ( 298 res) sj06160 ( 298) 75 23.0 16 FLJ00315 ( 925 res) sh06842 ( 925) 79 24.6 17 KIAA0434 ( 1571 res) hh02165 (1571) 81 25.3 17 KIAA1171 ( 595 res) hh05501s1 ( 595) 77 23.9 17 KIAA1734 ( 1313 res) ph00331 (1313) 79 24.8 20 KIAA1269 ( 531 res) hk04070 ( 531) 75 23.4 21 KIAA1810 ( 579 res) fk03376 ( 579) 75 23.5 22 KIAA0800 ( 1521 res) hg03850s1 (1521) 78 24.7 24 KIAA0992 ( 772 res) hk07554 ( 772) 75 23.7 25 KIAA1566 ( 1313 res) fh21445 (1313) 77 24.5 26 KIAA0447 ( 466 res) fh17910 ( 466) 73 23.0 26 KIAA1064 ( 1315 res) hj05008s1 (1315) 76 24.3 29 FLJ00044 ( 1051 res) as00044 (1051) 75 23.9 30 FLJ00258 ( 792 res) sj09927 ( 792) 73 23.3 34 FLJ00248 ( 501 res) sj08681 ( 501) 71 22.6 35 KIAA0705 ( 1483 res) hg03359s1 (1483) 75 24.2 35 KIAA1983 ( 418 res) fk09737(revised) ( 418) 70 22.3 36 KIAA1074 ( 1715 res) hj06637 (1715) 75 24.3 38 KIAA2036 ( 1322 res) pf06513 (1322) 74 23.9 38 KIAA1858 ( 2469 res) ae00147 (2469) 76 24.7 40 KIAA0579 ( 910 res) bg00015 ( 910) 72 23.2 41 KIAA1676 ( 735 res) fh07095 ( 735) 71 22.9 42 KIAA1213 ( 484 res) fh01142 ( 484) 69 22.2 44 KIAA1523 ( 687 res) fh16681(revised) ( 687) 70 22.7 46 KIAA2032 ( 952 res) eh00720 ( 952) 71 23.1 48 FLJ00295 ( 770 res) sh03877 ( 770) 70 22.7 49 KIAA1344 ( 858 res) fj00476s1 ( 858) 70 22.8 52 FLJ00214 ( 322 res) sj05155 ( 322) 66 21.4 53 KIAA1351 ( 1243 res) fj01021s1 (1243) 71 23.3 55 KIAA1147 ( 451 res) pf02131 ( 451) 67 21.8 56 KIAA0665 ( 760 res) hk02064 ( 760) 69 22.5 56 FLJ00253 ( 349 res) sj09455 ( 349) 66 21.4 56 FLJ00064 ( 276 res) as00064 ( 276) 65 21.1 56 FLJ00318 ( 127 res) sh07374 ( 127) 62 19.9 57 >>KIAA0907 ( 569 res) hk10396 (569 aa) initn: 69 init1: 69 opt: 105 Z-score: 113.2 bits: 29.2 E(): 0.42 Smith-Waterman score: 105; 30.588% identity (49.412% similar) in 85 aa overlap (100-178:341-425) 70 80 90 100 110 120 FLJ000 PELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVPDLGQVPEID : : : : .:: . : :. : KIAA09 AAAKKLCENLLQTVHAEYSRFVNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYP 320 330 340 350 360 370 130 140 150 160 170 180 FLJ000 V--PSYLPDLP--GIANDLMYIADLGPGIAPSAPGTIPELPTFH--TEVAEPLKTYKMGY : : : : :. . . ..:.::. :. : .: .:: . :.: : .: KIAA09 VVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPM 380 390 400 410 420 430 KIAA09 GGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIH 440 450 460 470 480 490 >>KIAA1116 ( 1330 res) hk02574(revised) (1330 aa) initn: 63 init1: 63 opt: 105 Z-score: 109.8 bits: 29.8 E(): 0.64 Smith-Waterman score: 105; 29.126% identity (50.485% similar) in 103 aa overlap (70-166:905-999) 40 50 60 70 80 90 FLJ000 PLSISKREQLEQQVGGAGQRWRQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRS :..:...: .. ..::.: KIAA11 QRPNVSSNSEILGVRPSNVSSSSGIIAAQPPNILNNSGILGIQPPSVSNSSGLLG----- 880 890 900 910 920 100 110 120 130 140 150 FLJ000 LSPLTCPC---LILQVPENYFYVPDL-GQVPEIDVPSYLPDL--PGIANDLMYIADLGPG . : . : :. : : .: : : : :. :: : :. : . :. :: KIAA11 VLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAG-PQNLPPLSIPNQRMPTMPMLDIRPG 930 940 950 960 970 980 160 170 180 FLJ000 IAPSAPGTIPELPTFHTEVAEPLKTYKMGY . :.::: :..: KIAA11 LIPQAPG--PRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPG 990 1000 1010 1020 1030 1040 >>KIAA1862 ( 1070 res) aj00563 (1070 aa) initn: 122 init1: 95 opt: 99 Z-score: 104.5 bits: 28.5 E(): 1.3 Smith-Waterman score: 99; 35.385% identity (56.923% similar) in 65 aa overlap (94-158:235-297) 70 80 90 100 110 120 FLJ000 QWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVPDLG : ..:: . : : . . :: KIAA18 RKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEILVPG-P 210 220 230 240 250 260 130 140 150 160 170 180 FLJ000 QVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYKMGY . :: . ::.:: ::..... . :::::: : : KIAA18 RHPETS-PSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCLKELPEA 270 280 290 300 310 320 KIAA18 QDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKMENSWVQSPP 330 340 350 360 370 380 >>KIAA0505 ( 200 res) hh00043 (200 aa) initn: 70 init1: 43 opt: 88 Z-score: 99.8 bits: 25.2 E(): 2.3 Smith-Waterman score: 91; 27.083% identity (48.958% similar) in 96 aa overlap (85-168:38-130) 60 70 80 90 100 FLJ000 GAGQRWRQVQWPRALPELLSSQGCWALYSTHGRCTQGL---VGCPC-----RSLSPLTCP :: : .. . ::: . : .:: KIAA05 PPPVDAFSSPCQLFREEGEDSRFASDACVLHGWCRPAVPKVMPCPCLPQPGMGSRPCACP 10 20 30 40 50 60 110 120 130 140 150 160 FLJ000 CLILQV--PENYFYVPD--LGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTI . : : .: : . : ...: .: ::. . . . .: : .: : .. KIAA05 ASTRHSSPPLPSFSLPTFPLPSSPLLSAPLLFPPLPSAPLSSLPLLSL-PLPSPLFP-SL 70 80 90 100 110 120 170 180 FLJ000 PELPTFHTEVAEPLKTYKMGY : ::.: KIAA05 P-LPSFPFPSPPFPSPPLPSSPLPSPLLLSPPLTCLTLLCQGPGQGWPLTLRSKWVWGPG 130 140 150 160 170 180 >>KIAA2019 ( 2797 res) ha06118 (2797 aa) initn: 120 init1: 51 opt: 95 Z-score: 96.6 bits: 28.4 E(): 3.5 Smith-Waterman score: 95; 32.000% identity (58.667% similar) in 75 aa overlap (110-175:1531-1603) 80 90 100 110 120 130 FLJ000 ALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVPDL----GQVPEIDVPSY-L :..::. ..:.. :..:....::. . KIAA20 IPSMQGDLKTTDLRIQAPSADLEVQAGQVDLKLPEG--HMPEVAGLKGHLPKVEMPSFKM 1510 1520 1530 1540 1550 140 150 160 170 180 FLJ000 P--DLPGIANDLMYIA-DL-GPGIAPSAPGTIPELPTFHTEVAEPLKTYKMGY : :: : :. :: :: :: . ::. .:.: : KIAA20 PKVDLKGPQVDVKGPKLDLKGPKAEVMAPDVEVSLPSVETDVQAPGSMLDGARLEGDLSL 1560 1570 1580 1590 1600 1610 KIAA20 AHEDVAGKDSKFQGPKLSTSGFEWSSKKVSMSSSEIEGNVTFHEKTSTFPIVESVVHEGD 1620 1630 1640 1650 1660 1670 >>KIAA1172 ( 929 res) hj03919(revised) (929 aa) initn: 75 init1: 52 opt: 90 Z-score: 95.8 bits: 26.7 E(): 3.9 Smith-Waterman score: 90; 31.944% identity (47.222% similar) in 72 aa overlap (100-166:459-527) 70 80 90 100 110 120 FLJ000 PELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLILQVPENYFYVPDLGQVPEID .::. : : :: . :: :: . KIAA11 TLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKP---LPVPVPPIPVPAPITVPPPQ 430 440 450 460 470 480 130 140 150 160 170 180 FLJ000 VPSYLPDLP--GIANDLMYIADLG---PGIAPSAPGTIPELPTFHTEVAEPLKTYKMGY :: . : : : . . :: ::..:..: : : KIAA11 VPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPP 490 500 510 520 530 540 KIAA11 GPPPPITPPVSIPPPHTPPISIPNLVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVT 550 560 570 580 590 600 >>KIAA1744 ( 855 res) pj01516 (855 aa) initn: 46 init1: 46 opt: 89 Z-score: 95.1 bits: 26.4 E(): 4.2 Smith-Waterman score: 89; 26.804% identity (48.454% similar) in 97 aa overlap (90-183:682-773) 60 70 80 90 100 110 FLJ000 WRQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCPCRSLSPLTCPCLI---LQVPENY : . . :: : . : : ::. : KIAA17 ALTHSTAQSDSTSYISAVGNTNANGTVVPPQQMGSGPCGSCGR-RCSCGTNGNLQL--NS 660 670 680 690 700 120 130 140 150 160 170 FLJ000 FYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPL .: :. : :::.. ::.: : :. . . . . : .:. : . : .:. KIAA17 YYYPNPMPGPMYRVPSFFT-LPSICNG-SYLNQAHQSNGNQLPFFLPQTPYANGLVHDPV 710 720 730 740 750 760 180 FLJ000 KTYKMGY . .: KIAA17 MGSQANYGMQQMAGFGRFYPVYPAPNVVANTSGSGPKKNGNVSCYNCGVSGHYAQDCKQS 770 780 790 800 810 820 >>KIAA0718 ( 742 res) hk01073 (742 aa) initn: 44 init1: 44 opt: 87 Z-score: 93.6 bits: 25.9 E(): 5.1 Smith-Waterman score: 87; 26.852% identity (47.222% similar) in 108 aa overlap (73-165:272-378) 50 60 70 80 90 100 FLJ000 ISKREQLEQQVGGAGQRWRQVQWPRALPELLSSQGC-WALYSTHGRCTQGLVG-CPCRSL :.. : : . :..:.. : : : : KIAA07 NTDVMHHYWVEGNCPTKCDKCHKTVKCYQGLTGLHCVWCQITLHNKCASHLKPECDCGPL 250 260 270 280 290 300 110 120 130 140 150 FLJ000 S-----PLT-CPCLILQVPENYFYVPDLGQ--VPEIDVPSYLPDLPGIANDLMYIADL-- . : : :: .. .: . ::. : : . : :. : .. .. KIAA07 KDHILPPTTICPVVLQTLPTSGVSVPEERQSTVKKEKSGSQQPNKVIDKNKMQRANSVTV 310 320 330 340 350 360 160 170 180 FLJ000 -GPG--IAPSAPGTIPELPTFHTEVAEPLKTYKMGY : : ..: .::: : : KIAA07 DGQGLQVTP-VPGTHPLLVFVNPKSGGKQGERIYRKFQYLLNPRQVYSLSGNGPMPGLNF 370 380 390 400 410 420 >>KIAA0685 ( 939 res) hk02959 (939 aa) initn: 44 init1: 44 opt: 85 Z-score: 90.6 bits: 25.7 E(): 7.6 Smith-Waterman score: 85; 28.421% identity (50.526% similar) in 95 aa overlap (91-175:845-933) 70 80 90 100 110 FLJ000 RQVQWPRALPELLSSQGCWALYSTHGRCTQGLVGCP-CRSLSPLTCPCLILQVPENYFYV : ::: : ::: .:: .:.. . KIAA06 KAASAMDAVSRGPGREAPPLPTVARTEEAVGRVGCADSRLLSP-ACP-----APKEVTAA 820 830 840 850 860 120 130 140 150 160 170 FLJ000 PDLGQVPE--IDVPSYL----PDLP--GIANDLMYIADLGPGIA-PSAPGTIPELPTFHT : .. :: . . . : : .: .... : . ::: .: .::. . : : KIAA06 PAVAVPPEATVAITTALSKAGPAIPTPAVSSALAVAVPLGPIMAVTAAPAMVATLGTVTK 870 880 890 900 910 920 180 FLJ000 EVAEPLKTYKMGY . : KIAA06 DGQMPRQKELP 930 >>KIAA1466 ( 505 res) fj01441 (505 aa) initn: 62 init1: 40 opt: 81 Z-score: 88.9 bits: 24.5 E(): 9.4 Smith-Waterman score: 83; 25.806% identity (51.613% similar) in 124 aa overlap (33-138:165-288) 10 20 30 40 50 FLJ000 CRPCRYKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAP-LSISKREQLEQQVGG--AGQR : .: ..: : ... .::. :. : : KIAA14 GNRKADREARQAAMSNSSTKKKTPTLLLLLEPSLPETPSYSPNEKAWFEQESGSYIQGGR 140 150 160 170 180 190 60 70 80 90 100 110 FLJ000 WRQVQWPRALPELLSSQGCWALYS-TH-GRCT-QGLVG----CPC-RSLSPLTCP-CLIL :. . :.:: .. : ... :: :. . . ::: :: ... .: :: KIAA14 WKFSDGRLAIPEAIAPQFMKQFHQGTHMGKTALETLVGWHFYVPCLTAITRAVCEQCLTC 200 210 220 230 240 250 120 130 140 150 160 FLJ000 ------QVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPE ::: . . . : .: .. . .:: KIAA14 AQNNPWQVPTQPPGIQETGATPCENLLVDFTELPRARGYQYMLVFVCTFSGWVEAFPTRI 260 270 280 290 300 310 170 180 FLJ000 LPTFHTEVAEPLKTYKMGY KIAA14 EKAQEVTRLLLKDIIPRFGLPLTLGSDNGPAFMAEVVQQLSQLLKIKWKLHIVYHPQSSG 320 330 340 350 360 370 183 residues in 1 query sequences 2210811 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:45 2009 done: Fri Feb 27 10:32:45 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]