# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00071.fasta.huge -Q ../query/FLJ00071.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00071, 250 aa vs ./tmplib.10216 library 2210744 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.5238+/-0.00316; mu= 16.3633+/- 0.214 mean_var=58.5141+/-12.772, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.167666 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1434 ( 677 res) hh05877 ( 677) 86 29.5 0.55 KIAA0348 ( 1443 res) hg01551(revised) (1443) 85 29.7 1 FLJ00067 ( 574 res) as00067 ( 574) 81 28.2 1.2 KIAA1041 ( 642 res) fh02801 ( 642) 81 28.2 1.2 KIAA0235 ( 1064 res) ha04677s1 (1064) 80 28.3 2 KIAA0099 ( 1175 res) hk05583 (1175) 77 27.6 3.5 KIAA0728 ( 1637 res) fh22477 (1637) 77 27.8 4.2 KIAA1067 ( 690 res) hj05418 ( 690) 73 26.4 4.9 KIAA0871 ( 471 res) hk06991 ( 471) 71 25.6 5.5 KIAA1344 ( 858 res) fj00476s1 ( 858) 73 26.5 5.6 KIAA1815 ( 881 res) ha00534 ( 881) 73 26.5 5.7 KIAA0205 ( 391 res) ha02324 ( 391) 70 25.3 5.8 FLJ00368 ( 299 res) sh06338 ( 299) 69 24.9 5.9 KIAA0578 ( 1542 res) bf00990 (1542) 73 26.8 7.9 KIAA0757 ( 534 res) hk04606 ( 534) 69 25.2 8.3 KIAA0202 ( 508 res) ha02944 ( 508) 68 25.0 9.5 KIAA0770 ( 913 res) hk05040s1 ( 913) 70 25.8 9.6 KIAA2000 ( 699 res) bf00135 ( 699) 68 25.2 11 KIAA0177 ( 1725 res) ha02779s1 (1725) 71 26.4 12 KIAA1537 ( 619 res) fj02581s1 ( 619) 67 24.8 13 KIAA1032 ( 1702 res) ff09715 (1702) 70 26.2 14 FLJ00293 ( 812 res) sh03709 ( 812) 67 25.0 15 KIAA1335 ( 2041 res) bf00973 (2041) 70 26.3 15 KIAA0799 ( 2111 res) fg01615y1 (2111) 69 26.0 19 FLJ00246 ( 1486 res) sj08543 (1486) 67 25.4 21 KIAA0308 ( 2759 res) ee00163 (2759) 69 26.2 22 KIAA0994 ( 686 res) hk07627 ( 686) 64 24.2 22 KIAA1254 ( 758 res) hh14357s1 ( 758) 64 24.2 24 KIAA0109 ( 438 res) ha01466 ( 438) 62 23.4 24 KIAA0695 ( 781 res) hk04006s1 ( 781) 64 24.3 24 KIAA0248 ( 1880 res) ha02775s1 (1880) 67 25.5 24 KIAA0942 ( 537 res) hh04979s1 ( 537) 62 23.5 27 KIAA0207 ( 605 res) ha02795 ( 605) 62 23.6 29 KIAA1028 ( 501 res) fh00176s1 ( 501) 61 23.3 30 KIAA0131 ( 942 res) ha01235 ( 942) 63 24.1 31 KIAA0833 ( 1734 res) hg01719s1 (1734) 65 25.0 32 FLJ00024 ( 195 res) as00024 ( 195) 57 21.7 34 KIAA0019 ( 838 res) ha00537 ( 838) 62 23.8 35 KIAA0630 ( 490 res) hh01735 ( 490) 60 23.0 35 KIAA0589 ( 687 res) hj02695 ( 687) 61 23.5 37 KIAA0897 ( 419 res) hk09524 ( 419) 59 22.7 38 KIAA1972 ( 576 res) fk09334 ( 576) 60 23.1 39 KIAA0892 ( 621 res) hk08289 ( 621) 60 23.2 41 KIAA0065 ( 848 res) ha00946 ( 848) 61 23.6 41 KIAA1089 ( 1033 res) ha02541 (1033) 61 23.7 46 FLJ00359 ( 1056 res) sh03991 (1056) 61 23.7 47 FLJ00166 ( 454 res) sh07301 ( 454) 58 22.5 47 KIAA1404 ( 1925 res) eg01672 (1925) 63 24.5 48 KIAA0750 ( 1125 res) hk04329 (1125) 61 23.7 49 KIAA0647 ( 1195 res) hj03819s1 (1195) 61 23.8 50 >>KIAA1434 ( 677 res) hh05877 (677 aa) initn: 36 init1: 36 opt: 86 Z-score: 111.0 bits: 29.5 E(): 0.55 Smith-Waterman score: 86; 26.891% identity (58.824% similar) in 119 aa overlap (137-249:343-449) 110 120 130 140 150 160 FLJ000 LPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAKHEAFFIRCGIFLILE :.:... :..: :.: : :.. . : . KIAA14 SFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNA-ASHGAAFVEFDVHLSKD 320 330 340 350 360 370 170 180 190 200 210 220 FLJ000 KLKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKG . .. :..: : .: . .:: : : . :... .:..: :. . :: . KIAA14 FVPVV-YHDL--TCCLTMKKK---FDADPVELFEIPVKELTFDQLQ-----LLKLTHVTA 380 390 400 410 420 230 240 250 FLJ000 YISHQHQKLVVSKQN------PFPPLSTVC :..... ::...: ::: :. : KIAA14 LKSKDRKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLST 430 440 450 460 470 480 >>KIAA0348 ( 1443 res) hg01551(revised) (1443 aa) initn: 107 init1: 74 opt: 85 Z-score: 106.2 bits: 29.7 E(): 1 Smith-Waterman score: 85; 31.429% identity (71.429% similar) in 35 aa overlap (12-46:98-132) 10 20 30 40 FLJ000 KKLFPHSRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKP .::..:: :. :::... .. ... : KIAA03 KKILSSGVFYFSWPNDGSRFDLTVRTQKQGDDSSEWGNSFFWNQLLHVPLRQHQVSCCDW 70 80 90 100 110 120 50 60 70 80 90 100 FLJ000 LIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRM :.. : KIAA03 LLKIICGVVTIRTVYASHKQAKACLVSRVSCERTGTRFHTRGVNDDGHVSNFVETEQMIY 130 140 150 160 170 180 >>FLJ00067 ( 574 res) as00067 (574 aa) initn: 47 init1: 47 opt: 81 Z-score: 105.2 bits: 28.2 E(): 1.2 Smith-Waterman score: 81; 24.306% identity (51.389% similar) in 144 aa overlap (109-247:399-529) 80 90 100 110 120 130 FLJ000 QAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVS .....:..:. : : : .: .. FLJ000 KARARELSSGQKDQGQAANMLCVVVNDMEQLRLVIGKLPA--QLAWEALEQ--RVGAVLE 370 380 390 400 410 420 140 150 160 170 180 190 FLJ000 EGNLL-LLHEALAKHEAFF---IRCGIFLILEKLKIITYRNLFKKVYLLLKTHQLSLDAF .:.: :: : . : . :: :. . :.:.. ... : : .. : ::. FLJ000 QGQLQNTLHAQLQSALAGLGHEIRTGVRTLAEQLEVGIAKHIQKLVG--VRESVLPEDAI 430 440 450 460 470 480 200 210 220 230 240 250 FLJ000 LVALKFMQVEDVDIDEVQCIL-ANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC : .::..:: : . .::. . .. . :..: . : : : FLJ000 LPLMKFLEVE-------LCYMNTNLVQENFSRSVAAPALGALATSPSPPTAPPSWAPASV 490 500 510 520 530 FLJ000 LRGVAAPALGALATSPSPPTAPLSWASASVLRGGGESLW 540 550 560 570 >>KIAA1041 ( 642 res) fh02801 (642 aa) initn: 83 init1: 59 opt: 81 Z-score: 104.7 bits: 28.2 E(): 1.2 Smith-Waterman score: 81; 39.286% identity (67.857% similar) in 28 aa overlap (223-250:443-468) 200 210 220 230 240 250 FLJ000 AFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC :.. . .:::: : ..: : :: .. : KIAA10 HPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTL--THQAPPPPQQVSCNS 420 430 440 450 460 470 KIAA10 GVSNDWYATLDMLKESCRIASSVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCS 480 490 500 510 520 530 >>KIAA0235 ( 1064 res) ha04677s1 (1064 aa) initn: 60 init1: 37 opt: 80 Z-score: 101.1 bits: 28.3 E(): 2 Smith-Waterman score: 80; 23.022% identity (54.676% similar) in 139 aa overlap (107-239:722-854) 80 90 100 110 120 130 FLJ000 FKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAE--VT : .. :.::. ::. . : .: . . KIAA02 PSRLRYNRSDIMPSGRSRLLEDFRNNRFPNLQLRDLIGHI--VEFSQDQHGSRFIQQKLE 700 710 720 730 740 140 150 160 170 180 190 FLJ000 RAVSEGNLLLLHEALAKHEAFFIRCGIFLILEKLKIITYRNLFKKVYLL--LKTHQLSLD ::. ....: : . :. . .: :.. . .: .:. : .. : : : KIAA02 RATPAERQMVFNEIL--QAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLA 750 760 770 780 790 800 200 210 220 230 240 250 FLJ000 AFLVALKFMQ--VEDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC . . . .: .:... :. . .. .: ::: .. :. . ::.: KIAA02 LQMYGCRVIQKALESISSDQQSEMVKELD--GHVLKCVKDQNGNHVVQKCIECVQPQSLQ 810 820 830 840 850 860 KIAA02 FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQ 870 880 890 900 910 920 >>KIAA0099 ( 1175 res) hk05583 (1175 aa) initn: 60 init1: 37 opt: 77 Z-score: 96.7 bits: 27.6 E(): 3.5 Smith-Waterman score: 77; 22.302% identity (51.079% similar) in 139 aa overlap (107-239:831-965) 80 90 100 110 120 130 FLJ000 FKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVT-- : .. . ::. .:. . : .: .. KIAA00 SSRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHI--MEFSQDQHGSRFIQLKLE 810 820 830 840 850 140 150 160 170 180 190 FLJ000 RAVSEGNLLLLHEALAKHEAFFIRCGIFLILEKLKIITYRNLFKKVYLL--LKTHQLSLD ::. :...: : . :. . .: :.. . .: .:. : .. : ::: KIAA00 RATPAERQLVFNEIL--QAAYQLNVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLA 860 870 880 890 900 910 200 210 220 230 240 250 FLJ000 AFLVALKFMQVEDVDIDEVQCILANLIYM--GHVKGYISHQHQKLVVSKQNPFPPLSTVC . . . .: : : .. ... ::: .. :. . ::.: KIAA00 LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQ 920 930 940 950 960 970 KIAA00 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 980 990 1000 1010 1020 1030 >>KIAA0728 ( 1637 res) fh22477 (1637 aa) initn: 43 init1: 43 opt: 77 Z-score: 95.2 bits: 27.8 E(): 4.2 Smith-Waterman score: 77; 21.801% identity (56.398% similar) in 211 aa overlap (47-242:942-1142) 20 30 40 50 60 70 FLJ000 WGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLK---DDYSTAQRVTYKYYVGRKAMF ::: .: .. :: ... ..... . KIAA07 KAFQKELGKRTSSVQALKRSARELIEGSRDDSSWVKVQMQELSTRWETVCALSISKQTRL 920 930 940 950 960 970 80 90 100 110 120 FLJ000 DSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLP-----VKMLLGHMPTVELLKKYHLM .. ..::::. : . . .. .. . . .:: .. :. . :..:: . KIAA07 EAALRQAEEFHSVVHALLEWLAEAEQTLRFHGVLPDDEDALRTLIDQHK--EFMKKLE-E 980 990 1000 1010 1020 130 140 150 160 170 180 FLJ000 QFAEVTRAVSEGNLLLL--HE---ALAKHEAFFIRCGIFLILEKLKIITYRNLFKKVYLL . ::...:.. :. .: : . :: .:: . .: : : : . . : KIAA07 KRAELNKATTMGDTVLAICHPDSITTIKHWITIIRARFEEVLAWAKQHQQR-LASALAGL 1030 1040 1050 1060 1070 1080 190 200 210 220 230 240 FLJ000 LKTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGYISHQHQKLV--VSKQN . ..: :.:.:. :.. .. .: : . .. . : .::. :. .:: .. ..... KIAA07 IAKQEL-LEALLAWLQWAETTLTDKD--KEVIPQEIE--EVKALIA-EHQTFMEEMTRKQ 1090 1100 1110 1120 1130 1140 250 FLJ000 PFPPLSTVC : KIAA07 PDVDKVTKTYKRRAADPSSLQSHIPVLDKGRAGRKRFPASSLYPSGSQTQIETKNPRVNL 1150 1160 1170 1180 1190 1200 >>KIAA1067 ( 690 res) hj05418 (690 aa) initn: 48 init1: 48 opt: 73 Z-score: 93.9 bits: 26.4 E(): 4.9 Smith-Waterman score: 73; 36.111% identity (66.667% similar) in 36 aa overlap (69-104:16-51) 40 50 60 70 80 90 FLJ000 CKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKN :. ... .:: :: ::: . ..:.: . KIAA10 AAGFRAMIPPQEASARRREIEDKLKQEEETLSFIRDSLEKSDQLT 10 20 30 40 100 110 120 130 140 150 FLJ000 KRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAKHEAFFIR : :. : KIAA10 KNMVSILSSFESRLMKLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEK 50 60 70 80 90 100 >>KIAA0871 ( 471 res) hk06991 (471 aa) initn: 44 init1: 44 opt: 71 Z-score: 93.1 bits: 25.6 E(): 5.5 Smith-Waterman score: 75; 24.026% identity (57.143% similar) in 154 aa overlap (67-207:92-232) 40 50 60 70 80 90 FLJ000 HLCKPLIRAIDSSNLKDDYSTAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQ .:: .:::. .... ..::: . . KIAA08 DPNYLMANERMNLMNMAKLSIKGLIESALNLGRT--LDSDYAPLQQFF-VVMEHCLKHGL 70 80 90 100 110 100 110 120 130 140 150 FLJ000 KNKRMILIYLLPVKMLLGHMPTVELLKKYHLMQFAEVTRAVSEGNLLLLHEALAKHEAFF : :. .: : . : . :: : . . ::.: .:. .: :. ... .:. KIAA08 KAKKT---FLGQNKSFWGPLELVEKL----VPEAAEITASVK--DLPGLKTPVGRGRAW- 120 130 140 150 160 160 170 180 190 200 FLJ000 IRCGIFL--ILEKLK-IITYRNLFKKVY----LLLKTHQLSLDAFLVALKF------MQV .: ... . : .: .:. ..:... : :... . . ..::.:. :. KIAA08 LRLALMQKKLSEYMKALINKKELLSEFYEPNALMMEEEGAIIAGLLVGLNVIDANFCMKG 170 180 190 200 210 220 210 220 230 240 250 FLJ000 EDVDIDEVQCILANLIYMGHVKGYISHQHQKLVVSKQNPFPPLSTVC ::.: KIAA08 EDLDSQVGVIDFSMYLKDGNSSKGTEGDGQITAILDQKNYVEELNRHLNATVNNLQAKVD 230 240 250 260 270 280 >>KIAA1344 ( 858 res) fj00476s1 (858 aa) initn: 45 init1: 45 opt: 73 Z-score: 92.9 bits: 26.5 E(): 5.6 Smith-Waterman score: 74; 22.105% identity (52.105% similar) in 190 aa overlap (41-207:56-240) 20 30 40 50 60 FLJ000 IEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQ--RVTYKYYVG : . .. . . .:: : ... :. KIAA13 AQIQLQLIMFSGFNVFRVGISFVIMCIFYMPTVNSLPELSPQKYFSTLQPGKASLAYFCQ 30 40 50 60 70 80 70 80 90 100 110 FLJ000 ----RKAMFDSDFKQA----EEY-LSFAFEHC-----HRSSQKNKRMILIYLLPVKMLLG : ..: ....: ..: .: : .: : :.: .. ::. ..:: KIAA13 ADSPRTSVFLEELNEAVRPLQDYGISVAKVNCVKEEISRYCGKEKDLMKAYLFKGNILLR 90 100 110 120 130 140 120 130 140 150 160 FLJ000 HMPTVELLKKY----HLM---QFAEVTRAVSEGNLLLLHEALAKHEAFFIRCGIFLILEK ..:: :. :.. :.:: .. .: ...:: : .: .: : .. KIAA13 EFPTDTLFDVNAIVAHVLFALLFSEVKYITNLEDLQNIENAL-KGKANII----FSYVRA 150 160 170 180 190 200 170 180 190 200 210 220 FLJ000 LKIITYRNLFKKVYLLLKTHQLSLDAFLVALKFMQVEDVDIDEVQCILANLIYMGHVKGY . : .: ... .. :.:. : . .. :. . :::. KIAA13 IGIPEHRAVMEAGFVYGTTYQFVLTTEIALLESIGSEDVEYAHLYFFHCKLVLDLTQQCR 210 220 230 240 250 260 230 240 250 FLJ000 ISHQHQKLVVSKQNPFPPLSTVC KIAA13 RTLMEQPLTTLNIHLFIKTMKAPLLTEVAEDPQQVSTVHLQLGLPLVFIVSQQATYEADR 270 280 290 300 310 320 250 residues in 1 query sequences 2210744 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:39 2009 done: Fri Feb 27 10:32:39 2009 Total Scan time: 0.400 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]