# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00065.fasta.nr -Q ../query/FLJ00065.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00065, 204 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826483 sequences Expectation_n fit: rho(ln(x))= 5.1921+/-0.000187; mu= 8.4443+/- 0.010 mean_var=74.9908+/-14.581, 0's: 37 Z-trim: 39 B-trim: 3086 in 1/65 Lambda= 0.148105 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440458|dbj|BAB15762.1| FLJ00065 protein [Homo ( 204) 1451 318.5 4.3e-85 gi|38511854|gb|AAH60783.1| BMF protein [Homo sapie ( 261) 1320 290.6 1.4e-76 gi|56748563|sp|Q96LC9.1|BMF_HUMAN RecName: Full=Bc ( 184) 1306 287.5 8.4e-76 gi|46854332|gb|AAH69328.1| BMF protein [Homo sapie ( 184) 1300 286.2 2e-75 gi|46854338|gb|AAH69505.1| Bcl2 modifying factor [ ( 184) 1298 285.8 2.7e-75 gi|73999757|ref|XP_849063.1| PREDICTED: similar to ( 184) 1232 271.7 4.8e-71 gi|116292143|dbj|BAF35579.1| Bcl2 modifying factor ( 184) 1218 268.7 3.8e-70 gi|149692070|ref|XP_001503620.1| PREDICTED: simila ( 184) 1214 267.8 6.9e-70 gi|123236209|emb|CAM19075.1| Bcl2 modifying factor ( 190) 1155 255.2 4.4e-66 gi|26351213|dbj|BAC39243.1| unnamed protein produc ( 271) 1155 255.4 5.8e-66 gi|56748562|sp|Q91ZE9.1|BMF_MOUSE RecName: Full=Bc ( 185) 1141 252.2 3.5e-65 gi|149022971|gb|EDL79865.1| Bcl2 modifying factor, ( 271) 1138 251.7 7.2e-65 gi|56748556|sp|Q8K589.1|BMF_RAT RecName: Full=Bcl- ( 185) 1128 249.5 2.4e-64 gi|115607140|gb|ABJ16416.1| BMF [Felis catus] ( 184) 1104 244.3 8.3e-63 gi|126278358|ref|XP_001380997.1| PREDICTED: simila ( 248) 1066 236.3 2.9e-60 gi|31282889|gb|AAP22965.1| Bcl-2 modifying factor- ( 163) 925 206.0 2.5e-51 gi|73999755|ref|XP_857761.1| PREDICTED: similar to ( 163) 867 193.7 1.3e-47 gi|156939511|gb|ABU97699.1| Bcl-2-modifying factor ( 193) 782 175.5 4.4e-42 gi|31282891|gb|AAP22966.1| Bcl-2 modifying factor- ( 129) 692 156.2 2e-36 gi|149022970|gb|EDL79864.1| Bcl2 modifying factor, ( 256) 680 153.8 2e-35 gi|148695963|gb|EDL27910.1| Bcl2 modifying factor ( 170) 647 146.7 1.9e-33 gi|156939513|gb|ABU97700.1| Bcl-2-modifying factor ( 118) 400 93.8 1.1e-17 gi|126631789|gb|AAI33771.1| LOC100049108 protein [ ( 117) 352 83.5 1.4e-14 gi|74152669|dbj|BAE42612.1| unnamed protein produc ( 62) 344 81.6 2.7e-14 gi|169404669|pdb|2VOG|B Chain B, Structure Of Mous ( 27) 168 43.7 0.003 >>gi|10440458|dbj|BAB15762.1| FLJ00065 protein [Homo sap (204 aa) initn: 1451 init1: 1451 opt: 1451 Z-score: 1683.9 bits: 318.5 E(): 4.3e-85 Smith-Waterman score: 1451; 100.000% identity (100.000% similar) in 204 aa overlap (1-204:1-204) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW 130 140 150 160 170 180 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :::::::::::::::::::::::: gi|104 WQILLFLHNLALNGEENRNGAGPR 190 200 >>gi|38511854|gb|AAH60783.1| BMF protein [Homo sapiens] (261 aa) initn: 1320 init1: 1320 opt: 1320 Z-score: 1531.2 bits: 290.6 E(): 1.4e-76 Smith-Waterman score: 1320; 100.000% identity (100.000% similar) in 186 aa overlap (19-204:76-261) 10 20 30 40 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGS :::::::::::::::::::::::::::::: gi|385 SSPRVLVTLDPGAEPWHHDSEAETLSWSHPGEMEPSQCVEELEDDVFQPEDGEPVTQPGS 50 60 70 80 90 100 50 60 70 80 90 100 FLJ000 LLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 LLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGV 110 120 130 140 150 160 110 120 130 140 150 160 FLJ000 TEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 TEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLH 170 180 190 200 210 220 170 180 190 200 FLJ000 VQQHQQNQNRVWWQILLFLHNLALNGEENRNGAGPR :::::::::::::::::::::::::::::::::::: gi|385 VQQHQQNQNRVWWQILLFLHNLALNGEENRNGAGPR 230 240 250 260 >>gi|56748563|sp|Q96LC9.1|BMF_HUMAN RecName: Full=Bcl-2- (184 aa) initn: 1306 init1: 1306 opt: 1306 Z-score: 1517.1 bits: 287.5 E(): 8.4e-76 Smith-Waterman score: 1306; 100.000% identity (100.000% similar) in 184 aa overlap (21-204:1-184) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL :::::::::::::::::::::::::::::::::::::::: gi|567 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|567 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW 110 120 130 140 150 160 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :::::::::::::::::::::::: gi|567 WQILLFLHNLALNGEENRNGAGPR 170 180 >>gi|46854332|gb|AAH69328.1| BMF protein [Homo sapiens] (184 aa) initn: 1300 init1: 1300 opt: 1300 Z-score: 1510.2 bits: 286.2 E(): 2e-75 Smith-Waterman score: 1300; 99.457% identity (100.000% similar) in 184 aa overlap (21-204:1-184) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL :::::::::::::::::::::::::::::::::::::::: gi|468 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|468 DCPLSRLQLFPLTHCCGPGLQPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|468 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW 110 120 130 140 150 160 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :::::::::::::::::::::::: gi|468 WQILLFLHNLALNGEENRNGAGPR 170 180 >>gi|46854338|gb|AAH69505.1| Bcl2 modifying factor [Homo (184 aa) initn: 1298 init1: 1298 opt: 1298 Z-score: 1507.9 bits: 285.8 E(): 2.7e-75 Smith-Waterman score: 1298; 99.457% identity (99.457% similar) in 184 aa overlap (21-204:1-184) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL :::::::::::::::::::::::::::::::::::::::: gi|468 MEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|468 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSPGVMLPCGVTEEPQRLFYGNA 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|468 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW 110 120 130 140 150 160 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :::::::::::::::::::::::: gi|468 WQILLFLHNLALNGEENRNGAGPR 170 180 >>gi|73999757|ref|XP_849063.1| PREDICTED: similar to Bcl (184 aa) initn: 1232 init1: 1232 opt: 1232 Z-score: 1431.7 bits: 271.7 E(): 4.8e-71 Smith-Waterman score: 1232; 94.022% identity (97.283% similar) in 184 aa overlap (21-204:1-184) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL ::: :::::::::::::::::: ::::::::::::::: : gi|739 MEPPQCVEELEDDVFQPEDGEPGTQPGSLLSADLFAQSQL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DCPLSRLHLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::: ::. ::::::::::.::::::::::::::::::::.::::::::::: gi|739 GYRLPLPASFPAGLPLLEQPPEGQWQHRAEVQIARKLQCIADQFHRLHMQQHQQNQNRVW 110 120 130 140 150 160 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :::::::::::::..::::::::: gi|739 WQILLFLHNLALNADENRNGAGPR 170 180 >>gi|116292143|dbj|BAF35579.1| Bcl2 modifying factor [Bo (184 aa) initn: 1218 init1: 1218 opt: 1218 Z-score: 1415.5 bits: 268.7 E(): 3.8e-70 Smith-Waterman score: 1218; 91.848% identity (97.283% similar) in 184 aa overlap (21-204:1-184) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL ::: :::::::::::::::::: ::: ::::::::::: : gi|116 MEPPQCVEELEDDVFQPEDGEPGTQPRSLLSADLFAQSQL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|116 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGHA 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::: ::.:::::::::::.::.:::::::::::::::::.::.:::.::.: gi|116 GYRLPLPASFPAGLPLGEQPPEGQWQHRAEIQIARKLQCIADQFHRLHMQQYQQNRNRMW 110 120 130 140 150 160 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :::::::::.::::.::::::::: gi|116 WQILLFLHNVALNGDENRNGAGPR 170 180 >>gi|149692070|ref|XP_001503620.1| PREDICTED: similar to (184 aa) initn: 1214 init1: 1214 opt: 1214 Z-score: 1410.9 bits: 267.8 E(): 6.9e-70 Smith-Waterman score: 1214; 92.391% identity (96.196% similar) in 184 aa overlap (21-204:1-184) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL ::: :::::::::::::::::: ::: ::::::::: : : gi|149 MEPPQCVEELEDDVFQPEDGEPGTQPRSLLSADLFAPSQL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA :::::.:.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DCPLSHLRLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA 50 60 70 80 90 100 130 140 150 160 170 180 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQWQHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRVW :::::::::::: ::.:::::::::::.::::::::::::::::::::.::::::.:::: gi|149 GYRLPLPASFPAGLPLGEQPPEGQWQHRAEVQIARKLQCIADQFHRLHMQQHQQNRNRVW 110 120 130 140 150 160 190 200 FLJ000 WQILLFLHNLALNGEENRNGAGPR :: :::::::::::.::::::::: gi|149 WQTLLFLHNLALNGDENRNGAGPR 170 180 >>gi|123236209|emb|CAM19075.1| Bcl2 modifying factor [Mu (190 aa) initn: 1153 init1: 823 opt: 1155 Z-score: 1342.6 bits: 255.2 E(): 4.4e-66 Smith-Waterman score: 1155; 87.634% identity (95.161% similar) in 186 aa overlap (19-203:4-189) 10 20 30 40 50 60 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGSLLSADLFAQSLL ::::: :::::::::::: ::::: ::::.:::::::::: : gi|123 MSPGEMEPPQCVEELEDDVFQSEDGEPGTQPGGLLSADLFAQSQL 10 20 30 40 70 80 90 100 110 120 FLJ000 DCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|123 DCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGVTEEPQRLFYGNA 50 60 70 80 90 100 130 140 150 160 170 FLJ000 GYRLPLPASFPAVLPIGEQPPEGQW-QHQAEVQIARKLQCIADQFHRLHVQQHQQNQNRV :::::::::::: :.::::::::. ::.::::::::::::::::::::.::::::..:. gi|123 GYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRLHTQQHQQNRDRA 110 120 130 140 150 160 180 190 200 FLJ000 WWQILLFLHNLALNGEENRNGAGPR :::..:::.::::: .:::.:.:: gi|123 WWQVFLFLQNLALNRQENREGVGPW 170 180 190 >>gi|26351213|dbj|BAC39243.1| unnamed protein product [M (271 aa) initn: 1153 init1: 823 opt: 1155 Z-score: 1340.4 bits: 255.4 E(): 5.8e-66 Smith-Waterman score: 1155; 87.634% identity (95.161% similar) in 186 aa overlap (19-203:85-270) 10 20 30 40 FLJ000 FYSCYCSQPSESNFVTGLGEMEPSQCVEELEDDVFQPEDGEPVTQPGS ::::: :::::::::::: ::::: ::::. gi|263 QAPRVFFTLDPGAEPWHHNSEAETLSWSHPGEMEPPQCVEELEDDVFQSEDGEPGTQPGG 60 70 80 90 100 110 50 60 70 80 90 100 FLJ000 LLSADLFAQSLLDCPLSRLQLFPLTHCCGPGLRPTSQEDKATQTLSPASPSQGVMLPCGV :::::::::: ::::::::::::::::::::::: ::::::::::::::::::::::::: gi|263 LLSADLFAQSQLDCPLSRLQLFPLTHCCGPGLRPISQEDKATQTLSPASPSQGVMLPCGV 120 130 140 150 160 170 110 120 130 140 150 160 FLJ000 TEEPQRLFYGNAGYRLPLPASFPAVLPIGEQPPEGQW-QHQAEVQIARKLQCIADQFHRL :::::::::::::::::::::::: :.::::::::. ::.::::::::::::::::::: gi|263 TEEPQRLFYGNAGYRLPLPASFPAGSPLGEQPPEGQFLQHRAEVQIARKLQCIADQFHRL 180 190 200 210 220 230 170 180 190 200 FLJ000 HVQQHQQNQNRVWWQILLFLHNLALNGEENRNGAGPR :.::::::..:.:::..:::.::::: .:::.:.:: gi|263 HTQQHQQNRDRAWWQVFLFLQNLALNRQENREGVGPW 240 250 260 270 204 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 18:35:09 2009 done: Fri Feb 27 18:39:51 2009 Total Scan time: 672.470 Total Display time: 0.020 Function used was FASTA [version 34.26.5 April 26, 2007]