# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00061.fasta.nr -Q ../query/FLJ00061.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00061, 173 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7827240 sequences Expectation_n fit: rho(ln(x))= 4.7436+/-0.000178; mu= 9.2026+/- 0.010 mean_var=60.7104+/-11.836, 0's: 27 Z-trim: 27 B-trim: 76 in 1/66 Lambda= 0.164605 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440450|dbj|BAB15758.1| FLJ00061 protein [Homo ( 173) 1188 289.8 1.3e-76 gi|119572166|gb|EAW51781.1| NECAP endocytosis asso ( 172) 1183 288.6 3e-76 gi|194374629|dbj|BAG62429.1| unnamed protein produ ( 185) 1123 274.4 6.2e-72 gi|62287168|sp|Q9NVZ3.1|NECP2_HUMAN RecName: Full= ( 263) 1118 273.3 1.9e-71 gi|55586003|ref|XP_513068.1| PREDICTED: hypothetic ( 263) 1118 273.3 1.9e-71 gi|108997983|ref|XP_001087060.1| PREDICTED: NECAP ( 263) 1118 273.3 1.9e-71 gi|62898249|dbj|BAD97064.1| hypothetical protein F ( 263) 1118 273.3 1.9e-71 gi|114554252|ref|XP_001154060.1| PREDICTED: hypoth ( 273) 1118 273.4 1.9e-71 gi|10435511|dbj|BAB14605.1| unnamed protein produc ( 273) 1118 273.4 1.9e-71 gi|108997986|ref|XP_001086937.1| PREDICTED: NECAP ( 273) 1118 273.4 1.9e-71 gi|194207989|ref|XP_001914727.1| PREDICTED: hypoth ( 265) 1090 266.7 1.9e-69 gi|73950822|ref|XP_535393.2| PREDICTED: similar to ( 266) 1090 266.7 1.9e-69 gi|75057822|sp|Q5E9Q4.1|NECP2_BOVIN RecName: Full= ( 266) 1089 266.5 2.2e-69 gi|62286980|sp|Q6P756.2|NECP2_RAT RecName: Full=Ad ( 263) 1078 263.8 1.3e-68 gi|62287164|sp|Q9D1J1.1|NECP2_MOUSE RecName: Full= ( 266) 1071 262.2 4.3e-68 gi|74140023|dbj|BAE33757.1| unnamed protein produc ( 266) 1071 262.2 4.3e-68 gi|126328913|ref|XP_001365848.1| PREDICTED: hypoth ( 267) 1020 250.1 1.9e-64 gi|125857985|gb|AAI29008.1| LOC100037850 protein [ ( 266) 982 241.0 9.9e-62 gi|53126691|emb|CAG30976.1| hypothetical protein [ ( 266) 980 240.6 1.4e-61 gi|50927257|gb|AAH79728.1| MGC83534 protein [Xenop ( 262) 960 235.8 3.6e-60 gi|119572169|gb|EAW51784.1| NECAP endocytosis asso ( 230) 901 221.8 5.4e-56 gi|114554254|ref|XP_001154130.1| PREDICTED: hypoth ( 237) 901 221.8 5.6e-56 gi|194378832|dbj|BAG63581.1| unnamed protein produ ( 237) 901 221.8 5.6e-56 gi|73950826|ref|XP_864756.1| PREDICTED: similar to ( 240) 895 220.4 1.5e-55 gi|47206105|emb|CAF92398.1| unnamed protein produc ( 242) 892 219.6 2.5e-55 gi|119609045|gb|EAW88639.1| NECAP endocytosis asso ( 192) 890 219.1 2.9e-55 gi|32484237|gb|AAH54244.1| MGC64450 protein [Xenop ( 273) 891 219.4 3.2e-55 gi|122140352|sp|Q3T093.1|NECP1_BOVIN RecName: Full ( 275) 889 219.0 4.5e-55 gi|73997236|ref|XP_543832.2| PREDICTED: similar to ( 275) 888 218.7 5.3e-55 gi|62287163|sp|Q9CR95.2|NECP1_MOUSE RecName: Full= ( 275) 887 218.5 6.3e-55 gi|109095491|ref|XP_001113344.1| PREDICTED: simila ( 275) 887 218.5 6.3e-55 gi|60359884|dbj|BAD90161.1| mFLJ00061 protein [Mus ( 280) 887 218.5 6.3e-55 gi|114643286|ref|XP_001167015.1| PREDICTED: hypoth ( 254) 883 217.5 1.1e-54 gi|114643290|ref|XP_001167043.1| PREDICTED: hypoth ( 260) 883 217.5 1.2e-54 gi|55732012|emb|CAH92713.1| hypothetical protein [ ( 275) 883 217.5 1.2e-54 gi|62287146|sp|Q5R630.1|NECP1_PONAB RecName: Full= ( 275) 883 217.5 1.2e-54 gi|114643282|ref|XP_508992.2| PREDICTED: hypotheti ( 275) 883 217.5 1.2e-54 gi|62286965|sp|P69682.1|NECP1_RAT RecName: Full=Ad ( 277) 882 217.3 1.4e-54 gi|22760612|dbj|BAC11264.1| unnamed protein produc ( 275) 880 216.8 2e-54 gi|22760576|dbj|BAC11250.1| unnamed protein produc ( 275) 880 216.8 2e-54 gi|62287155|sp|Q8NC96.2|NECP1_HUMAN RecName: Full= ( 275) 880 216.8 2e-54 gi|149712670|ref|XP_001498711.1| PREDICTED: simila ( 275) 878 216.4 2.8e-54 gi|37589671|gb|AAH59487.1| Zgc:73124 [Danio rerio] ( 261) 876 215.9 3.7e-54 gi|90083060|dbj|BAE90612.1| unnamed protein produc ( 275) 873 215.2 6.3e-54 gi|47221671|emb|CAF97936.1| unnamed protein produc ( 218) 869 214.2 1e-53 gi|49257277|gb|AAH72846.1| MGC80231 protein [Xenop ( 273) 870 214.5 1e-53 gi|114643292|ref|XP_001166987.1| PREDICTED: hypoth ( 228) 867 213.7 1.5e-53 gi|149530561|ref|XP_001520098.1| PREDICTED: hypoth ( 147) 858 211.4 4.5e-53 gi|189535005|ref|XP_001343934.2| PREDICTED: hypoth ( 165) 848 209.1 2.6e-52 gi|50417920|gb|AAH78360.1| LOC553536 protein [Dani ( 258) 848 209.2 3.7e-52 >>gi|10440450|dbj|BAB15758.1| FLJ00061 protein [Homo sap (173 aa) initn: 1188 init1: 1188 opt: 1188 Z-score: 1531.5 bits: 289.8 E(): 1.3e-76 Smith-Waterman score: 1188; 100.000% identity (100.000% similar) in 173 aa overlap (1-173:1-173) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 70 80 90 100 110 120 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW 130 140 150 160 170 >>gi|119572166|gb|EAW51781.1| NECAP endocytosis associat (172 aa) initn: 1183 init1: 1183 opt: 1183 Z-score: 1525.1 bits: 288.6 E(): 3e-76 Smith-Waterman score: 1183; 100.000% identity (100.000% similar) in 172 aa overlap (2-173:1-172) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW 120 130 140 150 160 170 >>gi|194374629|dbj|BAG62429.1| unnamed protein product [ (185 aa) initn: 1123 init1: 1123 opt: 1123 Z-score: 1447.7 bits: 274.4 E(): 6.2e-72 Smith-Waterman score: 1123; 100.000% identity (100.000% similar) in 164 aa overlap (2-165:1-164) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW ::::::::::::::::::::::::::::::::::::::::::::: gi|194 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVGLGNINRRCSCTLAT 120 130 140 150 160 170 gi|194 AQSCHC 180 >>gi|62287168|sp|Q9NVZ3.1|NECP2_HUMAN RecName: Full=Adap (263 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1439.1 bits: 273.3 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|622 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|622 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRP 120 130 140 150 160 170 gi|622 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAPVPWPQPNPATADI 180 190 200 210 220 230 >>gi|55586003|ref|XP_513068.1| PREDICTED: hypothetical p (263 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1439.1 bits: 273.3 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|555 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|555 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|555 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRP 120 130 140 150 160 170 gi|555 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPTVAPSSGGTSVPWPQPNPATADI 180 190 200 210 220 230 >>gi|108997983|ref|XP_001087060.1| PREDICTED: NECAP endo (263 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1439.1 bits: 273.3 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|108 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRARP 120 130 140 150 160 170 gi|108 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLTQPAVAPSSGGAPVPWPQPKPATADI 180 190 200 210 220 230 >>gi|62898249|dbj|BAD97064.1| hypothetical protein FLJ10 (263 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1439.1 bits: 273.3 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|628 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRP 120 130 140 150 160 170 gi|628 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQTAVAPSSGGAPVPWPQPNPATADI 180 190 200 210 220 230 >>gi|114554252|ref|XP_001154060.1| PREDICTED: hypothetic (273 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1438.9 bits: 273.4 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|114 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRP 120 130 140 150 160 170 gi|114 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPTVAPSSDQLPARPSQAQAGSSSD 180 190 200 210 220 230 >>gi|10435511|dbj|BAB14605.1| unnamed protein product [H (273 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1438.9 bits: 273.4 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|104 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRVRP 120 130 140 150 160 170 gi|104 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSDQLPARPSQAQAGSSSD 180 190 200 210 220 230 >>gi|108997986|ref|XP_001086937.1| PREDICTED: NECAP endo (273 aa) initn: 1118 init1: 1118 opt: 1118 Z-score: 1438.9 bits: 273.4 E(): 1.9e-71 Smith-Waterman score: 1118; 100.000% identity (100.000% similar) in 163 aa overlap (2-164:1-163) 10 20 30 40 50 60 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 MEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL 10 20 30 40 50 70 80 90 100 110 120 FLJ000 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 EDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFN 60 70 80 90 100 110 130 140 150 160 170 FLJ000 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW :::::::::::::::::::::::::::::::::::::::::::: gi|108 VALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIANMKKKEGAAGNPRARP 120 130 140 150 160 170 gi|108 ASTGGLSLLPPPPGGKTSTLIPPPGEQLAVGGSLTQPAVAPSSDQLPARPSPAQAGSNSD 180 190 200 210 220 230 173 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 18:13:47 2009 done: Fri Feb 27 18:18:06 2009 Total Scan time: 620.850 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]