# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00061.fasta.huge -Q ../query/FLJ00061.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00061, 173 aa vs ./tmplib.10216 library 2210821 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.8604+/-0.00318; mu= 14.5946+/- 0.215 mean_var=57.9811+/-12.575, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.168435 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0169 ( 1745 res) ha02315(revised) (1745) 88 29.9 0.76 KIAA0180 ( 403 res) ha02567s1 ( 403) 80 27.2 1.1 KIAA1881 ( 1348 res) ah02284 (1348) 83 28.5 1.5 FLJ00361 ( 366 res) sh04352 ( 366) 74 25.7 2.9 KIAA1038 ( 496 res) fh02273 ( 496) 73 25.6 4.2 KIAA0745 ( 909 res) hk04118 ( 909) 73 25.9 6.2 KIAA0569 ( 1318 res) hh02356 (1318) 74 26.3 6.7 KIAA1428 ( 709 res) fh02979s1 ( 709) 71 25.3 7.4 KIAA1988 ( 636 res) fk07519s1 ( 636) 70 25.0 8.1 FLJ00225 ( 402 res) sj06250 ( 402) 67 24.0 10 KIAA1193 ( 544 res) fg00739 ( 544) 68 24.4 10 KIAA0344 ( 2066 res) hg01568 (2066) 72 26.1 12 KIAA0895 ( 540 res) hk08826 ( 540) 66 23.9 14 KIAA0421 ( 1988 res) hh01158s1 (1988) 71 25.8 14 KIAA1128 ( 588 res) hg03213 ( 588) 66 24.0 15 KIAA0937 ( 653 res) hh04715 ( 653) 66 24.0 16 KIAA1319 ( 1208 res) fh13717 (1208) 68 24.8 17 KIAA0322 ( 1614 res) hg00462s1 (1614) 69 25.2 18 KIAA0888 ( 684 res) hk07993 ( 684) 65 23.8 20 KIAA0223 ( 1165 res) ha02995 (1165) 67 24.6 20 FLJ00214 ( 322 res) sj05155 ( 322) 62 22.7 20 KIAA1295 ( 550 res) fg01760 ( 550) 64 23.5 20 KIAA1773 ( 3434 res) hj00752s2 (3434) 70 25.8 24 KIAA0150 ( 944 res) ha01348 ( 944) 65 24.0 24 KIAA1340 ( 441 res) fj00164 ( 441) 62 22.9 25 KIAA1393 ( 500 res) hj06562 ( 500) 62 22.9 27 KIAA1495 ( 502 res) fj08986 ( 502) 62 22.9 27 KIAA0906 ( 923 res) hk10347 ( 923) 64 23.7 28 KIAA1440 ( 1377 res) hg02441b (1377) 65 24.2 31 FLJ00259 ( 659 res) sh04102 ( 659) 62 23.1 32 FLJ00172 ( 1125 res) sj00125 (1125) 64 23.8 32 KIAA1546 ( 684 res) fh12289 ( 684) 62 23.1 33 KIAA1867 ( 779 res) fj18636 ( 779) 62 23.1 35 KIAA1123 ( 1717 res) fh01458 (1717) 65 24.3 36 FLJ00324 ( 376 res) sj01157 ( 376) 59 22.1 37 KIAA0318 ( 1106 res) hg00364 (1106) 63 23.6 38 KIAA0408 ( 662 res) hg01359 ( 662) 61 22.8 38 KIAA1613 ( 686 res) fj12845 ( 686) 61 22.8 39 KIAA1031 ( 940 res) fh00470 ( 940) 62 23.2 40 KIAA1401 ( 853 res) hk09639 ( 853) 61 22.9 44 KIAA1913 ( 509 res) fk05496 ( 509) 59 22.2 44 KIAA1352 ( 1212 res) fj01313 (1212) 62 23.4 47 KIAA1915 ( 726 res) hf00664 ( 726) 60 22.6 47 KIAA0771 ( 948 res) hk05113 ( 948) 61 23.0 47 KIAA1797 ( 1281 res) fj20494 (1281) 62 23.4 49 KIAA1385 ( 768 res) fj06168 ( 768) 60 22.7 49 KIAA1906 ( 593 res) ah00281 ( 593) 59 22.3 49 KIAA1678 ( 1302 res) fh20705 (1302) 62 23.4 49 KIAA1464 ( 621 res) fh18679 ( 621) 59 22.3 50 FLJ00248 ( 501 res) sj08681 ( 501) 58 22.0 52 >>KIAA0169 ( 1745 res) ha02315(revised) (1745 aa) initn: 77 init1: 77 opt: 88 Z-score: 108.6 bits: 29.9 E(): 0.76 Smith-Waterman score: 88; 30.000% identity (60.000% similar) in 50 aa overlap (1-50:1348-1396) 10 20 30 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRG :. .: . .:. : . ::.. .: . KIAA01 VSLRMKQNLHFTEATLHLLLTLARTQQGATAVAGAGITQSICL-PLLSVYQLSTNGTAQT 1320 1330 1340 1350 1360 1370 40 50 60 70 80 90 FLJ000 YRAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSR :.. .:: ::: : :.. KIAA01 PSASRKSLDAPSWPGVYRLSMSLMEQLLKTLRYNFLPEALDFVGVHQERTLQCLNAVRTV 1380 1390 1400 1410 1420 1430 >>KIAA0180 ( 403 res) ha02567s1 (403 aa) initn: 32 init1: 32 opt: 80 Z-score: 105.5 bits: 27.2 E(): 1.1 Smith-Waterman score: 80; 26.667% identity (57.143% similar) in 105 aa overlap (11-108:297-393) 10 20 30 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQ--- .:. ::.. . ::.. :. . : KIAA01 LKDGTAGSHFMASPQCVGYSRSTAAPLTMTMCL-PDLKEIQ---RAVKLWVRSLDAQSVY 270 280 290 300 310 320 40 50 60 70 80 90 FLJ000 --LDQPSWSGRLRITAKGQMAYIKLEDRTSG-ELFAQAPVDQFPGTAVESVTDSSRYFVI :. :. .:. ::.. ..:. ... .:. . .:.: :. : : : :: KIAA01 VATDSESYVPELQQLFKGKVKVVSLKPEVAQVDLYILGQADHFIGNCVSSFTA----FVK 330 340 350 360 370 100 110 120 130 140 150 FLJ000 RIEDGNGR-RAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGF : .: .:: .:.:. KIAA01 RERDLQGRPSSFFGMDRPPKLRDEF 380 390 400 >>KIAA1881 ( 1348 res) ah02284 (1348 aa) initn: 42 init1: 42 opt: 83 Z-score: 103.3 bits: 28.5 E(): 1.5 Smith-Waterman score: 86; 29.240% identity (52.047% similar) in 171 aa overlap (9-152:1067-1228) 10 20 30 FLJ000 AMEESGYESVLCVKPDVHVYRIPPR----ATNRGYRAA : . . ::: : ::..: . KIAA18 PATSWGGLTSSRTTDNGGEQTALSPQEAPFSGISTPPDVLSVGPEPAWEAAATTKGLATD 1040 1050 1060 1070 1080 1090 40 50 60 70 FLJ000 EWQLDQPSWSGR----LRITAKG-----QMAYIKLEDRTSGELF--------AQAPVDQF . : . :: : :..: ..:... : . :..: :: ..: KIAA18 VATFTQGAAPGREDTGLLTTTHGPEEAPRLAMLQNELEGLGDIFHPMNAEEQAQLAASQ- 1100 1110 1120 1130 1140 1150 80 90 100 110 120 130 FLJ000 PGTAVESVTDSSRYFVIRIED-GNG--RRAFI-GIGFGDRGD--AFDFNVALQDHFKWVK :: : :. ..: ::: :. : : . .::: ... ..:. : : . ::: :. .. KIAA18 PGPKVLSAEQGS-YFV-RLGDLGPSFRQRAFEHAVSHLQHGQFQARDTLAQLQDCFRLIE 1160 1170 1180 1190 1200 1210 140 150 160 170 FLJ000 QQCEFAKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW . :.:: :. :.:: : KIAA18 K----AQQA--PEGQPRLDQGSGASAEDAAVQEERDAGVLSRVCGLLRQLHTAYSGLVSS 1220 1230 1240 1250 1260 >>FLJ00361 ( 366 res) sh04352 (366 aa) initn: 43 init1: 43 opt: 74 Z-score: 98.1 bits: 25.7 E(): 2.9 Smith-Waterman score: 74; 32.759% identity (50.000% similar) in 58 aa overlap (24-79:120-176) 10 20 30 40 50 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITA-K ::::. : :: . : :.: :: .: . FLJ003 SRRALSAPAPFRQEMHLWHQVQVLPPGEAAPRATGGGRRAPR-QDRGPAWRGRRGAAATE 90 100 110 120 130 140 60 70 80 90 100 110 FLJ000 GQMAYIKLEDRTSGELFAQAPVDQ-FPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFG . . . : . :: :. :: FLJ003 SPGRFRRSPGGPPGTICAQPPAGAGVPGPGRPARELLSVGLQRRPGAPGAASPGPRLQPH 150 160 170 180 190 200 >>KIAA1038 ( 496 res) fh02273 (496 aa) initn: 39 init1: 39 opt: 73 Z-score: 95.2 bits: 25.6 E(): 4.2 Smith-Waterman score: 73; 26.984% identity (58.730% similar) in 63 aa overlap (11-73:280-337) 10 20 30 40 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQ ::. .. .. : :. .. .: .. . KIAA10 DVGFIPTSGLSGENLITRSQSSELTKWYKGLCLLEQIDSFKPPQRSIDKPFRLCVSDVFK 250 260 270 280 290 300 50 60 70 80 90 100 FLJ000 PSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGN . :: . ::.: . .::. :: :.:. : KIAA10 DQGSG-FCITGKIEAGYIQTGDR----LLAMPPNETCTVKGITLHDEPVDWAAAGDHVSL 310 320 330 340 350 360 110 120 130 140 150 160 FLJ000 GRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQGPKLDLGFKEGQTIK KIAA10 TLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIEIPITKGFPVLLHYQTVSEPAV 370 380 390 400 410 420 >>KIAA0745 ( 909 res) hk04118 (909 aa) initn: 37 init1: 37 opt: 73 Z-score: 92.2 bits: 25.9 E(): 6.2 Smith-Waterman score: 73; 26.190% identity (57.143% similar) in 84 aa overlap (50-130:492-568) 20 30 40 50 60 70 FLJ000 YRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKL-EDRTSGELFAQAPVDQFP :: :.. .. : ::. . : : . : KIAA07 LNNHTSEHFSFLGINNQSNLTDMRCRTTFYTALGRLLMVDLGEDEDQYEQFMLPLTAAFE 470 480 490 500 510 520 80 90 100 110 120 130 FLJ000 GTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNV--ALQDHFKWVKQQCEF ..: :.: ... ...:...:. :: :: ::. ... :.:. KIAA07 AVAQMFSTNS-------FNEQEAKRTLVGLVRDLRGIAFAFNAKTSFMMLFEWIYPSYMP 530 540 550 560 570 140 150 160 170 FLJ000 AKQAQNPDQGPKLDLGFKEGQTIKLNIAVSSTLAWLW KIAA07 ILQRAIELWYHDPACTTPVLKLMAELVHNRSQRLQFDVSSPNGILLFRETSKMITMYGNR 580 590 600 610 620 630 >>KIAA0569 ( 1318 res) hh02356 (1318 aa) initn: 62 init1: 62 opt: 74 Z-score: 91.6 bits: 26.3 E(): 6.7 Smith-Waterman score: 74; 35.185% identity (55.556% similar) in 54 aa overlap (42-92:14-67) 20 30 40 50 60 70 FLJ000 CVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQ ::::: : . . . : : ::.:.: KIAA05 KRRNTSVRPQVCVSWSGRKRSVLTCSAGITVLPPDTLGEVFVQ 10 20 30 40 80 90 100 110 120 FLJ000 -AP--VDQFPGTAVESVTDSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFK :: :...: . . :: .: KIAA05 FAPGAVSSLPPFSPPHFAASSCFFFSPFLAKTTNKTSQIEPACCRSRAPSPCELPSDPLL 50 60 70 80 90 100 >>KIAA1428 ( 709 res) fh02979s1 (709 aa) initn: 70 init1: 42 opt: 71 Z-score: 90.8 bits: 25.3 E(): 7.4 Smith-Waterman score: 74; 21.642% identity (49.254% similar) in 134 aa overlap (15-145:264-385) 10 20 30 40 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAEWQLDQPSWS :: ..: .::. :. . . KIAA14 QNVRREMDSDIETMQQTIEDLEVASDPLYVPDPDPTKFP---VNRNLTRKAGYLNARNKT 240 250 260 270 280 290 50 60 70 80 90 100 FLJ000 GRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIRIEDGNGRRA : . : :. . . .:.:..:: : : :.. :. ... :: : KIAA14 GLVSSTWDRQFYFTQ-----GGNLMSQARGDVAGGLAMD--IDNCSVMAVDCEDR--RYC 300 310 320 330 340 110 120 130 140 150 160 FLJ000 FIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQ---AQNPDQGPKLDLGFKEGQTIKL : .: . ... . .:: .:. ...:: ..::.. KIAA14 FQITSFDGKKSSILQAESKKDHEEWICTINNISKQIYLSENPEETAARVNQSALEAVTPS 350 360 370 380 390 400 170 FLJ000 NIAVSSTLAWLW KIAA14 PSFQQRHESLRPAAGQSRPPTARTSSSGSLGSESTNLAALSLDSLVAPDTPIQFDIISPV 410 420 430 440 450 460 >>KIAA1988 ( 636 res) fk07519s1 (636 aa) initn: 52 init1: 52 opt: 70 Z-score: 90.0 bits: 25.0 E(): 8.1 Smith-Waterman score: 70; 24.706% identity (51.765% similar) in 85 aa overlap (1-81:119-203) 10 20 FLJ000 AMEESGYESVL-CVKPDVHVYRIPPRATN- : :: . .. : .:....: : . KIAA19 GLNGEIMEYDLQALNIKYAMDAFGGPIWSMAASPSGSQLLVGCEDGSVKLFQITPDKIQF 90 100 110 120 130 140 30 40 50 60 70 80 FLJ000 -RGYRAAEWQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVD-QFPGTAVESVT :.. . .. . :: : :.. ::.. : :: . :: :. :.. KIAA19 ERNFDRQKSRILSLSWHPSGTHIAAGSIDYISVFDVKSGSAVHKMIVDRQYMGVSKRKCI 150 160 170 180 190 200 90 100 110 120 130 140 FLJ000 DSSRYFVIRIEDGNGRRAFIGIGFGDRGDAFDFNVALQDHFKWVKQQCEFAKQAQNPDQG KIAA19 VWGVAFLSDGTIISVDSAGKVQFWDSATGTLVKSHLIANADVQSIAVADQEDSFVVGTAE 210 220 230 240 250 260 >>FLJ00225 ( 402 res) sj06250 (402 aa) initn: 50 init1: 50 opt: 67 Z-score: 88.4 bits: 24.0 E(): 10 Smith-Waterman score: 67; 33.333% identity (63.889% similar) in 36 aa overlap (6-41:227-260) 10 20 30 FLJ000 AMEESGYESVLCVKPDVHVYRIPPRATNRGYRAAE ::: .: .::: : :.. ... .: . FLJ002 KDQKKPPTAPREVKGTRRKLPTAFLPSKYHGYEELLTAKPDPAF--IEPKGIQKNAQALQ 200 210 220 230 240 250 40 50 60 70 80 90 FLJ000 WQLDQPSWSGRLRITAKGQMAYIKLEDRTSGELFAQAPVDQFPGTAVESVTDSSRYFVIR .: .: FLJ002 QMLKHPLLCHSSKPKLDTLQKPYVHKEKRAQRIPIPPPKKTRAQLLDDIFIRLRDPRNIT 260 270 280 290 300 310 173 residues in 1 query sequences 2210821 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:29 2009 done: Fri Feb 27 10:32:29 2009 Total Scan time: 0.340 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]