# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00057.fasta.huge -Q ../query/FLJ00057.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00057, 575 aa vs ./tmplib.10216 library 2210419 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.3609+/-0.00388; mu= 11.2060+/- 0.262 mean_var=83.5432+/-18.612, 0's: 0 Z-trim: 2 B-trim: 88 in 1/39 Lambda= 0.140320 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0890 ( 1210 res) hk08057 (1210) 112 32.9 0.21 KIAA1488 ( 852 res) fj07893 ( 852) 101 30.6 0.74 KIAA1214 ( 462 res) fh01431 ( 462) 93 28.8 1.4 KIAA0134 ( 587 res) ha04001 ( 587) 91 28.4 2.3 KIAA1793 ( 1270 res) fj07087 (1270) 95 29.5 2.3 KIAA0376 ( 885 res) hh00388 ( 885) 93 29.0 2.4 KIAA0564 ( 1441 res) hh01811 (1441) 94 29.4 3 KIAA1031 ( 940 res) fh00470 ( 940) 91 28.6 3.3 KIAA2021 ( 648 res) ah05004 ( 648) 88 27.9 3.8 FLJ00310 ( 291 res) sh06047 ( 291) 82 26.4 4.8 KIAA0272 ( 759 res) ha06802s1 ( 759) 85 27.3 6.4 FLJ00167 ( 181 res) sh07420 ( 181) 75 24.8 8.9 KIAA1095 ( 1098 res) hk06736 (1098) 84 27.2 9.8 FLJ00051 ( 462 res) as00051 ( 462) 79 25.9 10 FLJ00073 ( 462 res) as00073 ( 462) 79 25.9 10 KIAA1353 ( 640 res) fj01443 ( 640) 79 26.0 13 KIAA1904 ( 821 res) af00058 ( 821) 80 26.3 14 FLJ00260 ( 922 res) sh05833 ( 922) 80 26.4 15 KIAA0809 ( 1385 res) hk10195 (1385) 82 26.9 15 KIAA1827 ( 469 res) fk01409 ( 469) 76 25.3 16 KIAA1584 ( 995 res) fj06751 ( 995) 80 26.4 16 KIAA0612 ( 1810 res) hg00654s1 (1810) 83 27.2 16 KIAA0720 ( 1091 res) hk01741s1 (1091) 80 26.4 17 KIAA0648 ( 851 res) hj03994 ( 851) 78 25.9 19 KIAA1107 ( 1278 res) hh03040(revised) (1278) 80 26.5 19 KIAA0592 ( 1353 res) hj02807 (1353) 80 26.5 20 KIAA1419 ( 2464 res) ff01653 (2464) 83 27.3 21 KIAA0252 ( 702 res) ha07048s1 ( 702) 76 25.5 21 KIAA0632 ( 727 res) hh01900 ( 727) 76 25.5 22 KIAA1545 ( 968 res) fj14026s1 ( 968) 77 25.8 24 KIAA1781 ( 974 res) fg06971(revised) ( 974) 77 25.8 24 KIAA0933 ( 2147 res) hh04045s1 (2147) 81 26.9 25 KIAA1136 ( 596 res) hj01467 ( 596) 74 25.0 25 KIAA0032 ( 1054 res) ha01920 (1054) 77 25.8 25 KIAA0278 ( 460 res) ha06634 ( 460) 72 24.5 27 KIAA0803 ( 1708 res) hj03049(revised) (1708) 79 26.4 27 KIAA1672 ( 395 res) hj02515 ( 395) 71 24.2 28 KIAA1800 ( 736 res) fj21226 ( 736) 74 25.1 29 KIAA1710 ( 515 res) fj18457 ( 515) 72 24.5 30 KIAA0461 ( 1355 res) hg00867 (1355) 77 25.9 30 KIAA1728 ( 1644 res) pg00239 (1644) 78 26.2 31 KIAA1868 ( 463 res) fj22550 ( 463) 71 24.3 31 KIAA1235 ( 1485 res) fh08704 (1485) 77 25.9 33 KIAA1119 ( 1854 res) hf00569y1 (1854) 78 26.2 33 KIAA1240 ( 733 res) fh10357 ( 733) 73 24.9 34 KIAA0416 ( 529 res) hh00236 ( 529) 71 24.3 35 FLJ00279 ( 563 res) sh01691 ( 563) 71 24.4 36 KIAA1286 ( 1214 res) hh11961(revised) (1214) 75 25.5 37 KIAA0122 ( 1010 res) ha03733 (1010) 74 25.2 37 FLJ00395 ( 1105 res) sj06062 (1105) 74 25.2 40 >>KIAA0890 ( 1210 res) hk08057 (1210 aa) initn: 161 init1: 86 opt: 112 Z-score: 118.6 bits: 32.9 E(): 0.21 Smith-Waterman score: 112; 41.860% identity (72.093% similar) in 43 aa overlap (448-490:445-487) 420 430 440 450 460 470 FLJ000 DVVDTQDNGDHIWTNGENEINAEISEVQLDQDQVEVPLDRDQVAALEMICSNPVTVISGK :. ..:.: . . :. : ..::.:::: KIAA08 GKPYVPLLEAEEVRLSQSLLELWRRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGD 420 430 440 450 460 470 480 490 500 510 520 530 FLJ000 GGCGKTTIVSRLFKHIEQLEEREVKKACEDFEQDQNASEEWITFTEQSQLEADKAIEVLL :::::: . .:. KIAA08 TGCGKTTRIPQLLLERYVTEGRGARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQ 480 490 500 510 520 530 >>KIAA1488 ( 852 res) fj07893 (852 aa) initn: 83 init1: 83 opt: 101 Z-score: 108.7 bits: 30.6 E(): 0.74 Smith-Waterman score: 101; 30.303% identity (66.667% similar) in 66 aa overlap (440-505:38-101) 410 420 430 440 450 460 FLJ000 EVRLENPVDVVDTQDNGDHIWTNGENEINAEISEVQLDQDQVEVPLDRDQVAALEMICSN .. ..... . ..: : ...: .. KIAA14 DRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNH 10 20 30 40 50 60 470 480 490 500 510 520 FLJ000 PVTVISGKGGCGKTTIVSRLFKHIEQLEEREVKKACEDFEQDQNASEEWITFTEQSQLEA ::::::. :::::: :.... ... :: .:: KIAA14 QVTVISGETGCGKTTQVTQFI--LDNYIERGKGSACRIVCTQPRRISAISVAERVAAERA 70 80 90 100 110 120 530 540 550 560 570 FLJ000 DKAIEVLLTAPTGKAAGLLRQKTGLHAYTLCQVTLDSYPVLNLVTC KIAA14 ESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNL 130 140 150 160 170 180 >>KIAA1214 ( 462 res) fh01431 (462 aa) initn: 35 init1: 35 opt: 93 Z-score: 103.5 bits: 28.8 E(): 1.4 Smith-Waterman score: 99; 28.889% identity (55.556% similar) in 135 aa overlap (347-458:324-456) 320 330 340 350 360 370 FLJ000 NDLTLTLSNHMSFHAASESLKFLKDIGVVTYEKSCVFPYDLYHAERAIAFSICDLMKK-- ..:::: :. : : :. . ...: KIAA12 ETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDH--RTCPMCKMNILKALG 300 310 320 330 340 350 380 390 400 410 420 FLJ000 -PPWHLCVD-----VEKVLASIHTTKPENSSDDALNESK---PDEVRLENPVDVVDTQD- :: :.: : :.. :.. ..:: ..:::. :: . ..::. : KIAA12 IPPNADCMDDLPTDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQDTDP 360 370 380 390 400 410 430 440 450 460 470 FLJ000 ---NGDHIWT-NGENEI----NAEISEV---QLDQDQVEVPLDRDQVAALEMICSNPVTV .:: :.: :.:.: ...:: . .. ..::. :.: KIAA12 IPQEGDVIFTTNSEQEPAVSSDSDISLIMAMEVGLSDVELSTDQDCEEVKS 420 430 440 450 460 480 490 500 510 520 530 FLJ000 ISGKGGCGKTTIVSRLFKHIEQLEEREVKKACEDFEQDQNASEEWITFTEQSQLEADKAI >>KIAA0134 ( 587 res) ha04001 (587 aa) initn: 44 init1: 44 opt: 91 Z-score: 99.9 bits: 28.4 E(): 2.3 Smith-Waterman score: 91; 25.758% identity (59.091% similar) in 66 aa overlap (445-505:165-228) 420 430 440 450 460 470 FLJ000 NPVDVVDTQDNGDHIWTNGENEINAEISEVQLDQDQVEVPLDRDQVAALEMICSNPVTVI .:..... .:. . :. . . :.:. KIAA01 HLPAERVAEFRRALLHYLDFGQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVV 140 150 160 170 180 190 480 490 500 510 520 FLJ000 SGKGGCGKTTIVSRL-----FKHIEQLEEREVKKACEDFEQDQNASEEWITFTEQSQLEA .: ::::.: : . :.:. . :.. :: KIAA01 AGDTGCGKSTQVPQYLLAAGFSHVACTQPRRI--ACISLAKRVGFESLSQYGSQVGYQIR 200 210 220 230 240 250 530 540 550 560 570 FLJ000 DKAIEVLLTAPTGKAAGLLRQKTGLHAYTLCQVTLDSYPVLNLVTC KIAA01 FESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPT 260 270 280 290 300 310 >>KIAA1793 ( 1270 res) fj07087 (1270 aa) initn: 119 init1: 73 opt: 95 Z-score: 99.8 bits: 29.5 E(): 2.3 Smith-Waterman score: 95; 25.121% identity (48.309% similar) in 207 aa overlap (368-564:535-732) 340 350 360 370 380 390 FLJ000 FLKDIGVVTYEKSCVFPYDLYHAERAIAFSICDLMKKPPWHLCV--DVEKVLASIHTTKP .: :.: : : . ::.: . . KIAA17 LKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQE 510 520 530 540 550 560 400 410 420 430 440 450 FLJ000 ENSSDDALNESKPDEVRLENPVDVVDTQDNGDHIWTNGENEINAEISEVQLDQ-DQVEVP : . .: . : : . . ::. ... . . . . : : . ::.: KIAA17 ELQCHEAELQHLRDTVASFKESNEKDTETHAQLQEMKQLYQASKDELERQKHMYDQLEQD 570 580 590 600 610 620 460 470 480 490 500 FLJ000 LDRDQVAALEMICSNPVTVISGKGGCGKTTIVSRLFKHIEQLE--EREVKK----ACEDF : :. :. :.:. .:: . :..::: . :. . ..:. . :: . KIAA17 LLLCQLELKELKASHPIPEDKGKCANKCDTLLSRLTELQEKYKASQKEMGQLQMEQCELL 630 640 650 660 670 680 510 520 530 540 550 560 FLJ000 EQDQNASEEWITFTEQSQLEADKAIEVLLTAPTGKAAGLLRQKTGLHAYT-LCQVTLDSY : :: .: ::.::. . :: : :.. ::... : ::.. : KIAA17 E-DQRRMQE-----EQGQLQEELH---RLTLPLPKSGLLLKSQELLTKLEDLCELQLLYQ 690 700 710 720 730 570 FLJ000 PVLNLVTC KIAA17 GMQEEQKKLIQNQDCVLKEQLEIHEELRRFKESHFQEVLENPDDSKLAKSSKCNRNKQSK 740 750 760 770 780 790 >>KIAA0376 ( 885 res) hh00388 (885 aa) initn: 47 init1: 47 opt: 93 Z-score: 99.7 bits: 29.0 E(): 2.4 Smith-Waterman score: 93; 25.333% identity (56.000% similar) in 150 aa overlap (395-533:144-288) 370 380 390 400 410 420 FLJ000 AFSICDLMKKPPWHLCVDVEKVLASIHTTKPENSSDDALNESKPDEVRLENPVDVVDTQD : :.:: . . .. : . :. . .:: KIAA03 RLNALGFSLEQRLDNSEKLFGYQSLSPEITPGNQSDGGGTLTSSVEGSAPGSVEDLLSQD 120 130 140 150 160 170 430 440 450 460 470 480 FLJ000 NG---DHIWTNGENEINAEISEVQLDQDQVEVPLDRDQVAALEMICSNPVTVISGKGGCG .. :: .:. .....: ::: . . :: . . : : : : ::. : KIAA03 ENTLMDHQHSNSMDNLDSECSEVYQPLTSSDDALDAPSSSESEGI---PSIERSRKGSSG 180 190 200 210 220 230 490 500 510 520 530 FLJ000 KTTIVSR--LFKHIEQLEE------REVKKACEDFEQDQNASEEWITFTEQSQLEADKAI ... :: : ..:.:.:: .:.. . ... . :. ..: .:. .: .:.: KIAA03 NASEVSVACLTERIHQMEENQHSTSEELQATLQELADLQQITQELN--SENERLGEEKVI 240 250 260 270 280 540 550 560 570 FLJ000 EVLLTAPTGKAAGLLRQKTGLHAYTLCQVTLDSYPVLNLVTC KIAA03 LMESLCQQSDKLEHFSRQIEYFRSLLDEHHISYVIDEDVKSGRYMELEQRYMDLAENARF 290 300 310 320 330 340 >>KIAA0564 ( 1441 res) hh01811 (1441 aa) initn: 56 init1: 56 opt: 94 Z-score: 97.9 bits: 29.4 E(): 3 Smith-Waterman score: 94; 21.495% identity (63.551% similar) in 107 aa overlap (81-185:106-212) 60 70 80 90 100 110 FLJ000 GGVKAGSLPGCLRVSICDENTQETCKVFGRFPITGAWWRVKVQVKPVVGSRSYQYQVQGF ::: .. . . ::.:: ..:. : KIAA05 DGSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEF 80 90 100 110 120 130 120 130 140 150 160 FLJ000 PSYFLQSDMSP-PNQKHICALFLKECEVSSDDVNKFLTWVKEVSNYKNLNFENLRETLRT ..:. :.: ....: .. : .: .. ..:.:...... . .. . ..: .: : KIAA05 LTMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLST 140 150 160 170 180 190 170 180 190 200 210 220 FLJ000 FHK-ETGRKDQKQPTQNGQEELFLDNEMSLPLENTIPFRNVMTALQFPKIMEFLPVLLPR . . .:. .. :..: KIAA05 RQLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPEL 200 210 220 230 240 250 >>KIAA1031 ( 940 res) fh00470 (940 aa) initn: 69 init1: 69 opt: 91 Z-score: 97.1 bits: 28.6 E(): 3.3 Smith-Waterman score: 91; 31.034% identity (63.793% similar) in 58 aa overlap (7-62:194-251) 10 20 30 FLJ000 SMARSSPYLRQLQGPLLPPRDLVEED--DDYLNDDV :.. .: .:: : : : ::. . :: KIAA10 GSIDDIETDCYVDPRGSPALLPSTPTMPLFPHVLDLLAPLDSSRTLPSTDSLDDFSDGDV 170 180 190 200 210 220 40 50 60 70 80 90 FLJ000 EEDEESVFIDAEELCSGGVKAGSLPGCLRVSICDENTQETCKVFGRFPITGAWWRVKVQV : ....:. : .::......:. : KIAA10 FGPELDTLLDSLSLVQGGLSGSGVPSELPQLIPVFPGGTPLLPPVVGGSIPVSSPLPPAS 230 240 250 260 270 280 >>KIAA2021 ( 648 res) ah05004 (648 aa) initn: 125 init1: 70 opt: 88 Z-score: 96.0 bits: 27.9 E(): 3.8 Smith-Waterman score: 88; 25.664% identity (46.018% similar) in 113 aa overlap (175-281:46-153) 150 160 170 180 190 200 FLJ000 FLTWVKEVSNYKNLNFENLRETLRTFHKETGRKDQKQPTQNGQEELFLDNEMSLPLENTI ::: : : .:. : :.. : : KIAA20 GPRSPHKVGRRFPAGGKRGRGAKGSGRPLPGRKRQPWPPPDGRSEPAPDSHPHLSPEALG 20 30 40 50 60 70 210 220 230 240 250 FLJ000 PFRNVMTALQF-PKIMEFLPVLLPRHFKWI-----IGSGSKEMLKEIEEILGTHPWKLGF :: ...::. :. : ... .: . : .. . ..:.:: : : KIAA20 YFRRALSALKEAPETGEERDLMVHNIMKEVETQALALSTNRTGSEMLQELLGFSPLK--- 80 90 100 110 120 130 260 270 280 290 300 310 FLJ000 SKITYREWKLLRCEASWIAFCQCESLLQLMTDLEKNALIMYSRLKQICREDGHTYVEVND : : :: . .: .: KIAA20 --PLCRVWAALRSNLRTVACHRCGVHVLQSALLQLPRLLGSAAEEEEEEEEDGKDGPTET 140 150 160 170 180 190 >>FLJ00310 ( 291 res) sh06047 (291 aa) initn: 47 init1: 47 opt: 82 Z-score: 94.2 bits: 26.4 E(): 4.8 Smith-Waterman score: 82; 24.752% identity (62.376% similar) in 101 aa overlap (441-534:154-249) 420 430 440 450 460 470 FLJ000 VRLENPVDVVDTQDNGDHIWTNGENEINAEISEVQLDQDQVEVPLDRDQVAALEMICSNP ::. ... :...:: . .. .: .. FLJ003 AERVVVVRQLQQEAADSLKKLTMLESPLEGISHYHINLDETQVP--KKKLFQVESQFDDL 130 140 150 160 170 180 480 490 500 510 520 FLJ000 VT---VISGKGGCGKTTIVSRLFKHIEQLEEREVKKACEDFEQDQNASEEWI----TFTE .. ..:.: : . . ...:.. . : ..:.. :: .:.:.. :: : : : FLJ003 MVEKEAVSSK--CVNLAKENQVFQQ-KLLSMKKVQQECEKLEEDKKMLEEEILNLKTHME 190 200 210 220 230 530 540 550 560 570 FLJ000 QSQLEADKAIEVLLTAPTGKAAGLLRQKTGLHAYTLCQVTLDSYPVLNLVTC .:..: .: : FLJ003 NSMVELSKLQEYKSELDERAMQAVEKLEEIHLQEQAQYKKQLEQLNKDIIQLH 240 250 260 270 280 290 575 residues in 1 query sequences 2210419 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:32:14 2009 done: Fri Feb 27 10:32:14 2009 Total Scan time: 0.600 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]