# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00052.fasta.nr -Q ../query/FLJ00052.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00052, 368 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7823454 sequences Expectation_n fit: rho(ln(x))= 6.1736+/-0.000204; mu= 7.1751+/- 0.011 mean_var=132.0894+/-25.455, 0's: 34 Z-trim: 47 B-trim: 410 in 1/63 Lambda= 0.111594 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440434|dbj|BAB15750.1| FLJ00052 protein [Homo ( 368) 2418 400.1 3.7e-109 gi|114647229|ref|XP_509415.2| PREDICTED: similar t ( 407) 2418 400.2 4e-109 gi|109098940|ref|XP_001084823.1| PREDICTED: simila ( 407) 2389 395.5 1e-107 gi|194042976|ref|XP_001924353.1| PREDICTED: simila ( 405) 2235 370.7 2.9e-100 gi|194214254|ref|XP_001914936.1| PREDICTED: simila ( 406) 2209 366.5 5.4e-99 gi|109496051|ref|XP_341093.3| PREDICTED: similar t ( 862) 2186 363.2 1.2e-97 gi|68053233|sp|Q9H7L9.2|SDS3_HUMAN RecName: Full=S ( 328) 2136 354.7 1.6e-95 gi|75042006|sp|Q5RBB8.1|SDS3_PONAB RecName: Full=S ( 328) 2130 353.7 3.1e-95 gi|119618547|gb|EAW98141.1| suppressor of defectiv ( 328) 2119 352.0 1.1e-94 gi|172048634|sp|A6H6W9.1|SDS3_BOVIN RecName: Full= ( 328) 2111 350.7 2.6e-94 gi|73995289|ref|XP_543419.2| PREDICTED: similar to ( 434) 2109 350.5 3.9e-94 gi|68053214|sp|Q8BR65.1|SDS3_MOUSE RecName: Full=S ( 328) 2092 347.6 2.2e-93 gi|26335815|dbj|BAC31608.1| unnamed protein produc ( 328) 2086 346.6 4.2e-93 gi|149063516|gb|EDM13839.1| similar to FLJ00052 pr ( 331) 2086 346.6 4.3e-93 gi|20502870|gb|AAM22676.1|AF469109_1 SDS3 [Mus mus ( 328) 2082 346.0 6.6e-93 gi|38565990|gb|AAH62176.1| Suds3 protein [Mus musc ( 332) 2077 345.2 1.2e-92 gi|148687874|gb|EDL19821.1| RIKEN cDNA 2400003N08, ( 330) 2072 344.4 2e-92 gi|149063515|gb|EDM13838.1| similar to FLJ00052 pr ( 335) 2071 344.2 2.3e-92 gi|126324676|ref|XP_001362875.1| PREDICTED: simila ( 327) 2066 343.4 3.9e-92 gi|148687872|gb|EDL19819.1| RIKEN cDNA 2400003N08, ( 334) 2057 342.0 1.1e-91 gi|119618546|gb|EAW98140.1| suppressor of defectiv ( 317) 1939 323.0 5.5e-86 gi|53136632|emb|CAG32645.1| hypothetical protein [ ( 313) 1900 316.7 4.2e-84 gi|50418319|gb|AAH77985.1| MGC81661 protein [Xenop ( 321) 1850 308.6 1.1e-81 gi|49899079|gb|AAH76807.1| MGC83759 protein [Xenop ( 321) 1837 306.5 4.9e-81 gi|90075564|dbj|BAE87462.1| unnamed protein produc ( 292) 1817 303.3 4.3e-80 gi|220679403|emb|CAX14305.1| suppressor of defecti ( 318) 1816 303.2 5e-80 gi|156230905|gb|AAI52171.1| Suds3 protein [Danio r ( 310) 1807 301.7 1.4e-79 gi|220679404|emb|CAX14306.1| suppressor of defecti ( 326) 1790 299.0 9.3e-79 gi|49619047|gb|AAT68108.1| suppressor of defective ( 317) 1784 298.0 1.8e-78 gi|50417018|gb|AAH78355.1| Suppressor of defective ( 318) 1784 298.0 1.8e-78 gi|197631943|gb|ACH70695.1| suppressor of defectiv ( 311) 1754 293.2 5e-77 gi|119618545|gb|EAW98139.1| suppressor of defectiv ( 207) 1323 223.6 2.9e-56 gi|119618543|gb|EAW98137.1| suppressor of defectiv ( 302) 1305 220.9 2.8e-55 gi|149063514|gb|EDM13837.1| similar to FLJ00052 pr ( 202) 1260 213.4 3.3e-53 gi|148687873|gb|EDL19820.1| RIKEN cDNA 2400003N08, ( 202) 1248 211.5 1.2e-52 gi|85700307|gb|AAI12001.1| SUDS3 protein [Homo sap ( 184) 1204 204.4 1.6e-50 gi|47221504|emb|CAG08166.1| unnamed protein produc ( 337) 1199 203.8 4.2e-50 gi|62739853|gb|AAH93990.1| SUDS3 protein [Homo sap ( 169) 1118 190.5 2.2e-46 gi|10435847|dbj|BAB14685.1| unnamed protein produc ( 169) 1112 189.5 4.3e-46 gi|66514190|ref|XP_393483.2| PREDICTED: similar to ( 326) 1085 185.5 1.4e-44 gi|210092978|gb|EEA41191.1| hypothetical protein B ( 284) 1060 181.4 2e-43 gi|20988049|gb|AAH30252.1| SUDS3 protein [Homo sap ( 165) 1048 179.2 5.3e-43 gi|210116637|gb|EEA64380.1| hypothetical protein B ( 283) 1013 173.8 3.8e-41 gi|156223758|gb|EDO44590.1| predicted protein [Nem ( 399) 1004 172.5 1.3e-40 gi|212510957|gb|EEB14037.1| Sin3 histone deacetyla ( 318) 989 170.0 6.1e-40 gi|119570782|gb|EAW50397.1| hCG1746602, isoform CR ( 175) 856 148.3 1.1e-33 gi|91093166|ref|XP_967616.1| PREDICTED: similar to ( 326) 853 148.1 2.4e-33 gi|221114061|ref|XP_002158878.1| PREDICTED: hypoth ( 362) 819 142.7 1.2e-31 gi|198415295|ref|XP_002130717.1| PREDICTED: simila ( 299) 750 131.5 2.2e-28 gi|157018587|gb|EAL41125.3| AGAP000738-PA [Anophel ( 318) 741 130.1 6.3e-28 >>gi|10440434|dbj|BAB15750.1| FLJ00052 protein [Homo sap (368 aa) initn: 2418 init1: 2418 opt: 2418 Z-score: 2115.9 bits: 400.1 E(): 3.7e-109 Smith-Waterman score: 2418; 100.000% identity (100.000% similar) in 368 aa overlap (1-368:1-368) 10 20 30 40 50 60 FLJ000 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVRGPRSAAVRGDMSAAGLLAPAPAQAGAPPAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVRGPRSAAVRGDMSAAGLLAPAPAQAGAPPAP 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 EYYPEEDEELESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EYYPEEDEELESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASL 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 KRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 KRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFE 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 DKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 DKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRR 190 200 210 220 230 240 250 260 270 280 290 300 FLJ000 KPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 KPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDG 250 260 270 280 290 300 310 320 330 340 350 360 FLJ000 KLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 KLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLF 310 320 330 340 350 360 FLJ000 VIRRRSAA :::::::: gi|104 VIRRRSAA >>gi|114647229|ref|XP_509415.2| PREDICTED: similar to FL (407 aa) initn: 2418 init1: 2418 opt: 2418 Z-score: 2115.4 bits: 400.2 E(): 4e-109 Smith-Waterman score: 2418; 100.000% identity (100.000% similar) in 368 aa overlap (1-368:40-407) 10 20 30 FLJ000 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVR :::::::::::::::::::::::::::::: gi|114 ALDPEVARGARPPLPSAGAGGGARRRRGRGRRGCRSSSWGLPRTLLGRRRVPSAGGRGVR 10 20 30 40 50 60 40 50 60 70 80 90 FLJ000 GPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 GPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE 70 80 90 100 110 120 100 110 120 130 140 150 FLJ000 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI 130 140 150 160 170 180 160 170 180 190 200 210 FLJ000 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL 190 200 210 220 230 240 220 230 240 250 260 270 FLJ000 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK 250 260 270 280 290 300 280 290 300 310 320 330 FLJ000 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS 310 320 330 340 350 360 340 350 360 FLJ000 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::: gi|114 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 370 380 390 400 >>gi|109098940|ref|XP_001084823.1| PREDICTED: similar to (407 aa) initn: 2389 init1: 2389 opt: 2389 Z-score: 2090.1 bits: 395.5 E(): 1e-107 Smith-Waterman score: 2389; 99.185% identity (99.457% similar) in 368 aa overlap (1-368:40-407) 10 20 30 FLJ000 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVR ::: ::::::::::::::::::.:::::: gi|109 ALDPEVARGARPRLPSAGAGGGARRRPGRGRRGSRSSSWGLPRTLLGRRRVPKAGGRGVP 10 20 30 40 50 60 40 50 60 70 80 90 FLJ000 GPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE 70 80 90 100 110 120 100 110 120 130 140 150 FLJ000 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI 130 140 150 160 170 180 160 170 180 190 200 210 FLJ000 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL 190 200 210 220 230 240 220 230 240 250 260 270 FLJ000 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK 250 260 270 280 290 300 280 290 300 310 320 330 FLJ000 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS 310 320 330 340 350 360 340 350 360 FLJ000 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::: gi|109 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 370 380 390 400 >>gi|194042976|ref|XP_001924353.1| PREDICTED: similar to (405 aa) initn: 2073 init1: 2073 opt: 2235 Z-score: 1956.2 bits: 370.7 E(): 2.9e-100 Smith-Waterman score: 2235; 94.837% identity (96.196% similar) in 368 aa overlap (1-368:40-405) 10 20 30 FLJ000 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVR ::: ::.. :::.::::: : :: :: . gi|194 GRDPEVAAGARPPLPGAGARGGVWRRQRRGRRGSRSTGRRLPRALLGRRGVRRAGDRGPQ 10 20 30 40 50 60 40 50 60 70 80 90 FLJ000 GPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE ::.: : ::::::::::::: :::::::::::::::::::::::::::::::::::: gi|194 LARSTAGRVDMSAAGLLAPAPA--GAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE 70 80 90 100 110 120 100 110 120 130 140 150 FLJ000 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI 130 140 150 160 170 180 160 170 180 190 200 210 FLJ000 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL 190 200 210 220 230 240 220 230 240 250 260 270 FLJ000 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK 250 260 270 280 290 300 280 290 300 310 320 330 FLJ000 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS 310 320 330 340 350 360 340 350 360 FLJ000 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::: gi|194 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 370 380 390 400 >>gi|194214254|ref|XP_001914936.1| PREDICTED: similar to (406 aa) initn: 2143 init1: 2143 opt: 2209 Z-score: 1933.5 bits: 366.5 E(): 5.4e-99 Smith-Waterman score: 2209; 94.505% identity (96.703% similar) in 364 aa overlap (7-368:44-406) 10 20 30 FLJ000 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVRGP--RS ::: :::..:: ::: :: .. .: :: gi|194 KWRRREAPVSRARARGRSLAEQGKVAALPLSSWRLPRAMLGGRRV-RKGGVAAVAPAARS 20 30 40 50 60 70 40 50 60 70 80 90 FLJ000 AAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTEDASE :::::::::::::::: .:::::: ::::::::::::::.::::::::::::::::::: gi|194 AAVRGDMSAAGLLAPARPRAGAPPAAEYYPEEDEELESAEEDERSCRGRESDEDTEDASE 80 90 100 110 120 130 100 110 120 130 140 150 FLJ000 TDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAE ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|194 TDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERIRNAE 140 150 160 170 180 190 160 170 180 190 200 210 FLJ000 LFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMELTGDS 200 210 220 230 240 250 220 230 240 250 260 270 FLJ000 MEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPKRPAS 260 270 280 290 300 310 280 290 300 310 320 330 FLJ000 PSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVISSVGA 320 330 340 350 360 370 340 350 360 FLJ000 NEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::: gi|194 NEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 380 390 400 >>gi|109496051|ref|XP_341093.3| PREDICTED: similar to Si (862 aa) initn: 2160 init1: 2129 opt: 2186 Z-score: 1909.5 bits: 363.2 E(): 1.2e-97 Smith-Waterman score: 2186; 92.935% identity (95.109% similar) in 368 aa overlap (2-368:503-862) 10 20 30 FLJ000 RRGCRSSSWGLPRTLLGRRRVPSAGGRGVRG :: . ::: : . : ::: .:: gi|109 YDPEVARCARPPLPSAGAGGGARRRGRPGVRGSGCARWGLS----GAQ--P--GGRDLRG 480 490 500 510 520 40 50 60 70 80 90 FLJ000 PRSAAVRG-DMSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTE ::::.:: ::::::::::::: :.::::::::::.::::::.::::::::::::::::: gi|109 TRSAAARGGDMSAAGLLAPAPAPAAAPPAPEYYPEDDEELESVEDDERSCRGRESDEDTE 530 540 550 560 570 580 100 110 120 130 140 150 FLJ000 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERI ::::::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|109 DASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYRERI 590 600 610 620 630 640 160 170 180 190 200 210 FLJ000 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKMIENEKLTMEL 650 660 670 680 690 700 220 230 240 250 260 270 FLJ000 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYLLTDEQIMEDLRTLNKLKSPK 710 720 730 740 750 760 280 290 300 310 320 330 FLJ000 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHKSQAIYLESKDNQKLSCVIS 770 780 790 800 810 820 340 350 360 FLJ000 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::: gi|109 SVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 830 840 850 860 >>gi|68053233|sp|Q9H7L9.2|SDS3_HUMAN RecName: Full=Sin3 (328 aa) initn: 2136 init1: 2136 opt: 2136 Z-score: 1871.2 bits: 354.7 E(): 1.6e-95 Smith-Waterman score: 2136; 100.000% identity (100.000% similar) in 328 aa overlap (41-368:1-328) 20 30 40 50 60 70 FLJ000 LPRTLLGRRRVPSAGGRGVRGPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEEL :::::::::::::::::::::::::::::: gi|680 MSAAGLLAPAPAQAGAPPAPEYYPEEDEEL 10 20 30 80 90 100 110 120 130 FLJ000 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 140 150 160 170 180 190 FLJ000 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 200 210 220 230 240 250 FLJ000 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 260 270 280 290 300 310 FLJ000 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 320 330 340 350 360 FLJ000 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 280 290 300 310 320 >>gi|75042006|sp|Q5RBB8.1|SDS3_PONAB RecName: Full=Sin3 (328 aa) initn: 2130 init1: 2130 opt: 2130 Z-score: 1865.9 bits: 353.7 E(): 3.1e-95 Smith-Waterman score: 2130; 99.695% identity (100.000% similar) in 328 aa overlap (41-368:1-328) 20 30 40 50 60 70 FLJ000 LPRTLLGRRRVPSAGGRGVRGPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEEL :::::::::::::::::::::::::::::: gi|750 MSAAGLLAPAPAQAGAPPAPEYYPEEDEEL 10 20 30 80 90 100 110 120 130 FLJ000 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 ESAEEDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 140 150 160 170 180 190 FLJ000 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 200 210 220 230 240 250 FLJ000 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 260 270 280 290 300 310 FLJ000 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 320 330 340 350 360 FLJ000 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 280 290 300 310 320 >>gi|119618547|gb|EAW98141.1| suppressor of defective si (328 aa) initn: 2119 init1: 2119 opt: 2119 Z-score: 1856.4 bits: 352.0 E(): 1.1e-94 Smith-Waterman score: 2119; 99.390% identity (99.390% similar) in 328 aa overlap (41-368:1-328) 20 30 40 50 60 70 FLJ000 LPRTLLGRRRVPSAGGRGVRGPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEEL :::::::::::::::::::::::::::::: gi|119 MSAAGLLAPAPAQAGAPPAPEYYPEEDEEL 10 20 30 80 90 100 110 120 130 FLJ000 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 140 150 160 170 180 190 FLJ000 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 200 210 220 230 240 250 FLJ000 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|119 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPDILNYL 160 170 180 190 200 210 260 270 280 290 300 310 FLJ000 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 320 330 340 350 360 FLJ000 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 280 290 300 310 320 >>gi|172048634|sp|A6H6W9.1|SDS3_BOVIN RecName: Full=Sin3 (328 aa) initn: 2111 init1: 2111 opt: 2111 Z-score: 1849.4 bits: 350.7 E(): 2.6e-94 Smith-Waterman score: 2111; 98.780% identity (99.695% similar) in 328 aa overlap (41-368:1-328) 20 30 40 50 60 70 FLJ000 LPRTLLGRRRVPSAGGRGVRGPRSAAVRGDMSAAGLLAPAPAQAGAPPAPEYYPEEDEEL ::::.::::::: ::::::::::::::::: gi|172 MSAAALLAPAPAPAGAPPAPEYYPEEDEEL 10 20 30 80 90 100 110 120 130 FLJ000 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDYVEMKEQMYQDKLASLKRQLQQLQEG ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|172 ESAEDDERSCRGRESDEDTEDASETDLAKHDEEDFVEMKEQMYQDKLASLKRQLQQLQEG 40 50 60 70 80 90 140 150 160 170 180 190 FLJ000 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 TLQEYQKRMKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENL 100 110 120 130 140 150 200 210 220 230 240 250 FLJ000 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 IAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPAQLNYL 160 170 180 190 200 210 260 270 280 290 300 310 FLJ000 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYH ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|172 LTDEQIMEDLRTLNKLKSPKRPASPSSPEHLPTTPAESPAQRFEARIEDGKLYYDKRWYH 220 230 240 250 260 270 320 330 340 350 360 FLJ000 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|172 KSQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA 280 290 300 310 320 368 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 17:05:08 2009 done: Fri Feb 27 17:11:13 2009 Total Scan time: 836.090 Total Display time: 0.090 Function used was FASTA [version 34.26.5 April 26, 2007]