# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00046.fasta.huge -Q ../query/FLJ00046.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00046, 169 aa vs ./tmplib.10216 library 2210825 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 3.4763+/-0.00316; mu= 15.8985+/- 0.214 mean_var=56.4438+/-12.232, 0's: 0 Z-trim: 10 B-trim: 0 in 0/40 Lambda= 0.170713 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00015 ( 307 res) as00015 ( 307) 1106 280.1 6.3e-77 KIAA0786 ( 1021 res) hk05490 (1021) 397 106.2 4.7e-24 KIAA0821 ( 1566 res) hh02631 (1566) 390 104.7 2e-23 KIAA0768 ( 872 res) hk05006 ( 872) 385 103.1 3.3e-23 KIAA0279 ( 2854 res) ff05612 (2854) 253 71.3 4.1e-13 KIAA0812 ( 1364 res) hg01044 (1364) 230 65.2 1.3e-11 KIAA0758 ( 1370 res) hh15259 (1370) 170 50.4 3.8e-07 FLJ00270 ( 352 res) sj07613 ( 352) 156 46.2 1.8e-06 KIAA0550 ( 1524 res) hh15909 (1524) 156 47.0 4.4e-06 KIAA0686 ( 1200 res) fj02322 (1200) 117 37.3 0.003 KIAA0837 ( 745 res) hj06536 ( 745) 81 28.1 1 FLJ00178 ( 249 res) sj01102 ( 249) 72 25.3 2.5 KIAA1828 ( 496 res) ha06249 ( 496) 73 25.9 3.2 KIAA1531 ( 1206 res) ph00937 (1206) 76 27.2 3.3 FLJ00170 ( 1310 res) sh07968 (1310) 76 27.2 3.4 KIAA0001 ( 347 res) ha00008 ( 347) 69 24.7 5.1 KIAA1352 ( 1212 res) fj01313 (1212) 72 26.2 6.5 KIAA1368 ( 1049 res) fj03125 (1049) 69 25.4 9.9 FLJ00038 ( 199 res) as00038 ( 199) 63 22.9 10 KIAA1260 ( 817 res) hh15752 ( 817) 67 24.8 12 KIAA1746 ( 1098 res) pj01729 (1098) 68 25.2 12 KIAA1089 ( 1033 res) ha02541 (1033) 67 24.9 14 FLJ00258 ( 792 res) sj09927 ( 792) 65 24.2 17 KIAA0662 ( 1114 res) hk01953s1 (1114) 66 24.7 17 KIAA0766 ( 640 res) hk04860 ( 640) 64 23.9 17 FLJ00202 ( 233 res) sj04223 ( 233) 60 22.3 19 KIAA0805 ( 1327 res) hk02940s1 (1327) 66 24.8 19 KIAA0862 ( 584 res) hk06532 ( 584) 63 23.6 19 KIAA1904 ( 821 res) af00058 ( 821) 64 24.0 20 KIAA0956 ( 672 res) hj05590 ( 672) 63 23.7 21 KIAA1871 ( 821 res) hj05256s1 ( 821) 63 23.8 24 KIAA0344 ( 2066 res) hg01568 (2066) 66 25.1 25 KIAA1163 ( 437 res) hj05329 ( 437) 60 22.7 27 KIAA1083 ( 584 res) hj07423 ( 584) 61 23.1 27 FLJ00161 ( 596 res) sh06688 ( 596) 61 23.1 28 KIAA1939 ( 1082 res) ah01164 (1082) 63 23.9 28 KIAA0739 ( 1130 res) hk03925 (1130) 63 24.0 29 KIAA0165 ( 2093 res) ha02421 (2093) 65 24.8 29 KIAA0238 ( 676 res) fg04858 ( 676) 61 23.2 30 FLJ00132 ( 572 res) sh02007 ( 572) 60 22.8 32 KIAA1891 ( 780 res) fk02783 ( 780) 61 23.2 32 KIAA1101 ( 467 res) hk08029 ( 467) 59 22.5 34 KIAA0300 ( 2847 res) hf00389s1 (2847) 65 25.0 35 KIAA0819 ( 989 res) hh01037 ( 989) 61 23.4 37 KIAA1934 ( 452 res) fk02059 ( 452) 58 22.2 39 KIAA0775 ( 639 res) hk05255 ( 639) 59 22.6 40 KIAA1562 ( 1136 res) fh20205 (1136) 61 23.5 40 KIAA0997 ( 646 res) hk08613 ( 646) 59 22.6 41 KIAA0259 ( 1550 res) ha07059 (1550) 62 23.9 41 KIAA0147 ( 1630 res) ha01022s1 (1630) 62 23.9 42 >>FLJ00015 ( 307 res) as00015 (307 aa) initn: 1106 init1: 1106 opt: 1106 Z-score: 1474.5 bits: 280.1 E(): 6.3e-77 Smith-Waterman score: 1106; 99.408% identity (99.408% similar) in 169 aa overlap (1-169:139-307) 10 20 30 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQPEKGF :::::::::: ::::::::::::::::::: FLJ000 FLTARNLTVVNYSSINRFMKKLMFPVGYGVPAVTVAISAASRPHLYGTPSRCWLQPEKGF 110 120 130 140 150 160 40 50 60 70 80 90 FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFILGCT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFILGCT 170 180 190 200 210 220 100 110 120 130 140 150 FLJ000 WCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 WCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTESE 230 240 250 260 270 280 160 FLJ000 MHTLSSSAKADTSKPSTVN ::::::::::::::::::: FLJ000 MHTLSSSAKADTSKPSTVN 290 300 >>KIAA0786 ( 1021 res) hk05490 (1021 aa) initn: 387 init1: 387 opt: 397 Z-score: 525.2 bits: 106.2 E(): 4.7e-24 Smith-Waterman score: 397; 41.420% identity (71.598% similar) in 169 aa overlap (1-166:523-687) 10 20 30 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQPEKGF ::..:..:::. . ::: . :::. .. : KIAA07 EGVQLYLMLVEVFESEYSRKKYYYVAGYLFPATVVGVSAAIDYKSYGTEKACWLHVDNYF 500 510 520 530 540 550 40 50 60 70 80 90 FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFILGCT ::.:.::: :. .:......:: . .. ..:. . : :.: . .. : : : .:: : KIAA07 IWSFIGPVTFIILLNIIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLGAFALLCLLGLT 560 570 580 590 600 610 100 110 120 130 140 FLJ000 WCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGK---WSKGIRKLKT : .:.: .. . ::::::::.:..::::::. .: :...::..::: : : : KIAA07 WSFGLLFINEETIVMAYLFTIFNAFQGVFIFIFHCALQKKVRKEYGKCFRHSYCCGGLPT 620 630 640 650 660 670 150 160 FLJ000 ESEMHTLSSSAKADTSKPSTVN :: : ::.::.:.. : KIAA07 ESP-H---SSVKASTTRTSARYSSGTQSRIRRMWNDTVRKQSESSFISGDINSTSTLNQG 680 690 700 710 720 >>KIAA0821 ( 1566 res) hh02631 (1566 aa) initn: 427 init1: 390 opt: 390 Z-score: 513.9 bits: 104.7 E(): 2e-23 Smith-Waterman score: 390; 44.526% identity (73.723% similar) in 137 aa overlap (1-137:1066-1202) 10 20 30 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQPEKGF ::..:.:.::. . ::: . :::. .. : KIAA08 EGVHLYLLLVEVFESEYSRTKYYYLGGYCFPALVVGIAAAIDYRSYGTEKACWLRVDNYF 1040 1050 1060 1070 1080 1090 40 50 60 70 80 90 FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFILGCT ::.:.::: .. ::::...::: . : :. . : : : . :. : : ::.:: : KIAA08 IWSFIGPVSFVIVVNLVFLMVTLHKMIRSSSVLKPDSSRLDNIKSWALGAIALLFLLGLT 1100 1110 1120 1130 1140 1150 100 110 120 130 140 150 FLJ000 WCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTESE : .:.: .. . ::::::: .:..::::::. .: :...:...:.: KIAA08 WAFGLLFINKESVVMAYLFTTFNAFQGVFIFVFHCALQKKVHKEYSKCLRHSYCCIRSPP 1160 1170 1180 1190 1200 1210 160 FLJ000 MHTLSSSAKADTSKPSTVN KIAA08 GGTHGSLKTSAMRSNTRYYTGTQSRIRRMWNDTVRKQTESSFMAGDINSTPTLNRGTMGN 1220 1230 1240 1250 1260 1270 >>KIAA0768 ( 872 res) hk05006 (872 aa) initn: 385 init1: 385 opt: 385 Z-score: 510.0 bits: 103.1 E(): 3.3e-23 Smith-Waterman score: 385; 40.876% identity (74.453% similar) in 137 aa overlap (1-137:403-539) 10 20 30 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQPEKGF ::. ::.::: . ::: . :::. . : KIAA07 EGVQLYIMLVEVFESEHSRRKYFYLVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDTYF 380 390 400 410 420 430 40 50 60 70 80 90 FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFILGCT ::.:.::. :. .:.... ..:. . .. . :. : . : : . .. : : : .:: : KIAA07 IWSFIGPATLIIMLNVIFLGIALYKMFHHTAILKPESGCLDNIKSWVIGAIALLCLLGLT 440 450 460 470 480 490 100 110 120 130 140 150 FLJ000 WCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTESE : .:.. .. .. .:::::::.:::::.:::. .:.:...::..::: KIAA07 WAFGLMYINESTVIMAYLFTIFNSLQGMFIFIFHCVLQKKVRKEYGKCLRTHCCSGKSTE 500 510 520 530 540 550 160 FLJ000 MHTLSSSAKADTSKPSTVN KIAA07 SSIGSGKTSGSRTPGRYSTGSQSRIRRMWNDTVRKQSESSFITGDINSSASLNREGLLNN 560 570 580 590 600 610 >>KIAA0279 ( 2854 res) ff05612 (2854 aa) initn: 230 init1: 125 opt: 253 Z-score: 328.8 bits: 71.3 E(): 4.1e-13 Smith-Waterman score: 253; 34.328% identity (67.164% similar) in 134 aa overlap (1-133:2421-2549) 10 20 30 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQPEKGF :: ....... :. ::.:. :::. . KIAA02 EALHLYRALTEVRDVNTGPMRFYYMLGWGVPAFITGLAVGLDPEGYGNPDFCWLSIYDTL 2400 2410 2420 2430 2440 2450 40 50 60 70 80 FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKAT-AQLFILGC ::.: ::: :.:.. .:: .:: : : .. . .. . ... . : :..:. KIAA02 IWSFAGPVA--FAVSMSVFL---YILAARASCAAQRQGFEKKGPVSGLQPSFAVLLLLSA 2460 2470 2480 2490 2500 90 100 110 120 130 140 FLJ000 TWCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTES :: :..:.:. . .. :::. : .:: :::: : .::..::. KIAA02 TWLLALLSVNSDTLLFHYLFATCNCIQGPFIFLSYVVLSKEVRKALKLACSRKPSPDPAL 2510 2520 2530 2540 2550 2560 150 160 FLJ000 EMHTLSSSAKADTSKPSTVN KIAA02 TTKSTLTSSYNCPSPYADGRLYQPYGDSAGSLHSTSRSGKSQPSYIPFLLREESALNPGQ 2570 2580 2590 2600 2610 2620 >>KIAA0812 ( 1364 res) hg01044 (1364 aa) initn: 200 init1: 147 opt: 230 Z-score: 301.6 bits: 65.2 E(): 1.3e-11 Smith-Waterman score: 230; 28.571% identity (68.421% similar) in 133 aa overlap (1-132:705-831) 10 20 30 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQPEKGF ::: ....... :. ::.:. ::.. .. . KIAA08 QGLHLYRMQVEPRNVDRGAMRFYHALGWGVPAVLLGLAVGLDPEGYGNPDFCWISVHEPL 680 690 700 710 720 730 40 50 60 70 80 FLJ000 IWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFIL-GC ::.: ::: .. .: ..:: : : : ... ..: :..... :..: . KIAA08 IWSFAGPVVLVIVMNGTMFL-----LAARTSCSTGQ-REAKKTSALTLRSSFLLLLLVSA 740 750 760 770 780 90 100 110 120 130 140 FLJ000 TWCLGILQVGPAARVMAYLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTES .: .:.: :. . .. :: . . .:::. ..:..:.:. ..: KIAA08 SWLFGLLAVNHSILAFHYLHAGLCGLQGLAVLLLFCVLNADARAAWMPACLGRKAAPEEA 790 800 810 820 830 840 150 160 FLJ000 EMHTLSSSAKADTSKPSTVN KIAA08 RPAPGLGPGAYNNTALFEESGLIRITLGASTVSSVSSARSGRTQDQDSQRGRSYLRDNVL 850 860 870 880 890 900 >>KIAA0758 ( 1370 res) hh15259 (1370 aa) initn: 109 init1: 84 opt: 170 Z-score: 221.7 bits: 50.4 E(): 3.8e-07 Smith-Waterman score: 170; 27.976% identity (60.714% similar) in 168 aa overlap (2-162:1165-1324) 10 20 FLJ000 PAVTVAISAAFRPH-LYGTPSRCWLQPE--K :..: .: .:. .: . :::. : : KIAA07 LFYRLVFILHETSRSTQKAIAFCLGYGCPLAISVITLGATQPREVYTRKNVCWLNWEDTK 1140 1150 1160 1170 1180 1190 30 40 50 60 70 80 FLJ000 GFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLF--I ... .: :. : ::... .:. : : :.... ... .. .. . .. . KIAA07 ALL-AFAIPALIIVVVNITITIVV--ITKILRPSIGDKPCKQEKSSLFQISKSIGVLTPL 1200 1210 1220 1230 1240 1250 90 100 110 120 130 140 FLJ000 LGCTWCLGILQVGPAAR-VMAYLFTIINSLQGVFIFLVYCLLSQQVREQY-GKWSKGIRK :: :: .:. : :.. :. .:.:.: .::.::.: :: . .:.: .:.: KIAA07 LGLTWGFGLTTVFPGTNLVFHIIFAILNVFQGLFILLFGCLWDLKVQEALLNKFS----- 1260 1270 1280 1290 1300 150 160 FLJ000 LKTESEMHTLSSSAKADTSKPSTVN :. : .:. :.: ..: KIAA07 LSRWSSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKTGTYNVSTPEATSSSLENSSSAS 1310 1320 1330 1340 1350 1360 >>FLJ00270 ( 352 res) sj07613 (352 aa) initn: 171 init1: 117 opt: 156 Z-score: 209.3 bits: 46.2 E(): 1.8e-06 Smith-Waterman score: 156; 31.356% identity (61.017% similar) in 118 aa overlap (20-134:226-335) 10 20 30 40 FLJ000 PAVTVAISAAFRPHLYGTPSRCWLQ-P--EKGFIWGFLGPVCAIFSVNL : ::.. : .. .. :. : . ..: :: FLJ002 LSLSVKSSVYGPCTIPVFDSWENGTGFQNMSICWVRSPVVHSVLVMGY-GGLTSLF--NL 200 210 220 230 240 250 50 60 70 80 90 100 FLJ000 VLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKATAQLFILGCTWCLGILQVGPAARVMA :.. .:: :. :: ... ..: . . . . .:: :: :.... : . FLJ002 VVLAWALWTLR-RLRE-RADAPSVRACHD-TVTVLGLTVLLGTTWALAFFSFGVFLLPQL 260 270 280 290 300 110 120 130 140 150 160 FLJ000 YLFTIINSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTESEMHTLSSSAKADTSKPS .::::.::: : :.:: .: ::. : . FLJ002 FLFTILNSLYGFFLFLWFC--SQRCRSEAEAKAQIEAFSSSQTTQ 310 320 330 340 350 >>KIAA0550 ( 1524 res) hh15909 (1524 aa) initn: 197 init1: 122 opt: 156 Z-score: 202.6 bits: 47.0 E(): 4.4e-06 Smith-Waterman score: 194; 27.976% identity (55.952% similar) in 168 aa overlap (1-135:993-1160) 10 20 FLJ000 PAVTVAISAAF-RPHLYGTPSRCWLQPEKG ::..:: :..: : . ::: :::. : : KIAA05 TEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGG 970 980 990 1000 1010 1020 30 40 50 60 FLJ000 FIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSE----------------------- ....:.::. :. ::.:. .... : .: . :... KIAA05 LLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCG 1030 1040 1050 1060 1070 1080 70 80 90 100 110 FLJ000 -VSTLRNTRMLAFKATAQLF-------ILGCTWCLGILQVGPAARVM-AYLFTIINSLQG ::: . : .: :.:. .:. :: ..: . .. ::....:::: KIAA05 VVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQG 1090 1100 1110 1120 1130 1140 120 130 140 150 160 FLJ000 VFIFLVYCLLSQQVREQYGKWSKGIRKLKTESEMHTLSSSAKADTSKPSTVN : .:.:.: ..:.. . KIAA05 FVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVL 1150 1160 1170 1180 1190 1200 >>KIAA0686 ( 1200 res) fj02322 (1200 aa) initn: 113 init1: 113 opt: 117 Z-score: 151.8 bits: 37.3 E(): 0.003 Smith-Waterman score: 117; 42.857% identity (69.388% similar) in 49 aa overlap (84-131:1005-1053) 60 70 80 90 100 110 FLJ000 WILKNRLSSLNSEVSTLRNTRMLAFKATAQLFIL-GCTWCLGILQVGPAARVMAYLFTII :: : . :: : :... : ::.:. KIAA06 HAYQVKPQWKAYDDVFRGRTNAAEIPLILYLFALISVTWLWGGLHMAYRHFWMLVLFVIF 980 990 1000 1010 1020 1030 120 130 140 150 160 FLJ000 NSLQGVFIFLVYCLLSQQVREQYGKWSKGIRKLKTESEMHTLSSSAKADTSKPSTVN :::::...:.:: .: .:. KIAA06 NSLQGLYVFMVYFILHNQMCCPMKASYTVEMNGHPGPSTAFFTPGSGMPPAGGEISKSTQ 1040 1050 1060 1070 1080 1090 169 residues in 1 query sequences 2210825 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:30:41 2009 done: Fri Feb 27 10:30:41 2009 Total Scan time: 0.340 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]