# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00042.fasta.nr -Q ../query/FLJ00042.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00042, 452 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825166 sequences Expectation_n fit: rho(ln(x))= 5.4509+/-0.000189; mu= 11.1106+/- 0.011 mean_var=88.8680+/-17.104, 0's: 40 Z-trim: 44 B-trim: 13 in 1/65 Lambda= 0.136051 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440414|dbj|BAB15740.1| FLJ00042 protein [Homo ( 452) 3202 638.2 1.2e-180 gi|119606171|gb|EAW85765.1| ras homolog gene famil ( 527) 3202 638.3 1.3e-180 gi|21748540|dbj|BAC03407.1| FLJ00342 protein [Homo ( 233) 1596 322.8 5.7e-86 gi|14336708|gb|AAK61240.1|AE006464_8 similar to AK ( 615) 1056 217.1 9.4e-54 gi|108860798|sp|Q8IXI1.2|MIRO2_HUMAN RecName: Full ( 618) 1056 217.1 9.4e-54 gi|114660194|ref|XP_001155839.1| PREDICTED: ras ho ( 598) 1042 214.4 6.2e-53 gi|114660192|ref|XP_510715.2| PREDICTED: ras homol ( 616) 1042 214.4 6.3e-53 gi|25187967|emb|CAD56957.1| mitochondrial Rho 2 [H ( 618) 1039 213.8 9.5e-53 gi|183396454|gb|ACC62129.1| mitochondrial Rho 2 (p ( 443) 988 203.7 7.7e-50 gi|75072868|sp|Q864R5.1|MIRO2_PIG RecName: Full=Mi ( 620) 980 202.2 2.9e-49 gi|73959829|ref|XP_537019.2| PREDICTED: similar to ( 616) 979 202.0 3.3e-49 gi|194219430|ref|XP_001497143.2| PREDICTED: ras ho ( 621) 972 200.7 8.7e-49 gi|81912643|sp|Q7TSA0.1|MIRO2_RAT RecName: Full=Mi ( 622) 971 200.5 1e-48 gi|75070046|sp|Q5E9M9.1|MIRO2_BOVIN RecName: Full= ( 618) 969 200.1 1.3e-48 gi|148690518|gb|EDL22465.1| ras homolog gene famil ( 277) 962 198.4 1.9e-48 gi|81914514|sp|Q8JZN7.1|MIRO2_MOUSE RecName: Full= ( 620) 962 198.7 3.4e-48 gi|31126975|gb|AAP04409.2| miro protein [Bos tauru ( 618) 959 198.1 5.1e-48 gi|149052153|gb|EDM03970.1| ras homolog gene famil ( 626) 953 196.9 1.2e-47 gi|126335285|ref|XP_001365487.1| PREDICTED: hypoth ( 618) 914 189.3 2.3e-45 gi|126335287|ref|XP_001365557.1| PREDICTED: hypoth ( 621) 914 189.3 2.3e-45 gi|114660196|ref|XP_001155477.1| PREDICTED: ras ho ( 509) 896 185.7 2.3e-44 gi|149504540|ref|XP_001518555.1| PREDICTED: hypoth ( 467) 892 184.8 3.8e-44 gi|82082858|sp|Q5ZM83.1|MIRO2_CHICK RecName: Full= ( 618) 844 175.5 3.2e-41 gi|119606174|gb|EAW85768.1| ras homolog gene famil ( 300) 822 170.9 3.7e-40 gi|119606170|gb|EAW85764.1| ras homolog gene famil ( 374) 822 171.0 4.4e-40 gi|47225988|emb|CAG04362.1| unnamed protein produc ( 651) 824 171.6 5e-40 gi|108860797|sp|Q32LU1.1|MIRO2_DANRE RecName: Full ( 617) 823 171.4 5.5e-40 gi|109127117|ref|XP_001118510.1| PREDICTED: simila ( 455) 809 168.5 3e-39 gi|82183440|sp|Q6DIS1.1|MIRO2_XENTR RecName: Full= ( 616) 805 167.9 6.4e-39 gi|149635110|ref|XP_001511136.1| PREDICTED: hypoth ( 687) 721 151.4 6.3e-34 gi|82237231|sp|Q6NVC5.1|MIRO1_DANRE RecName: Full= ( 619) 718 150.8 8.8e-34 gi|82233942|sp|Q5ZM73.1|MIRO1_CHICK RecName: Full= ( 619) 717 150.6 1e-33 gi|126313991|ref|XP_001374644.1| PREDICTED: hypoth ( 688) 717 150.6 1.1e-33 gi|12053353|emb|CAB66863.1| hypothetical protein [ ( 580) 713 149.8 1.7e-33 gi|119600657|gb|EAW80251.1| ras homolog gene famil ( 597) 713 149.8 1.7e-33 gi|25187965|emb|CAD56956.1| mitochondrial Rho 1 [H ( 618) 713 149.8 1.7e-33 gi|108860796|sp|Q8IXI2.2|MIRO1_HUMAN RecName: Full ( 618) 713 149.8 1.7e-33 gi|117645238|emb|CAL38085.1| hypothetical protein ( 618) 713 149.8 1.7e-33 gi|119600652|gb|EAW80246.1| ras homolog gene famil ( 625) 713 149.8 1.8e-33 gi|73966878|ref|XP_537733.2| PREDICTED: similar to ( 629) 713 149.8 1.8e-33 gi|73966876|ref|XP_867966.1| PREDICTED: similar to ( 631) 713 149.8 1.8e-33 gi|30704548|gb|AAH51818.1| RHOT1 protein [Homo sap ( 633) 713 149.8 1.8e-33 gi|194377422|dbj|BAG57659.1| unnamed protein produ ( 650) 713 149.8 1.8e-33 gi|75750476|ref|NP_001028738.1| ras homolog gene f ( 659) 713 149.8 1.8e-33 gi|46249998|gb|AAH68463.1| RHOT1 protein [Homo sap ( 667) 713 149.8 1.8e-33 gi|26996622|gb|AAH41114.1| RHOT1 protein [Homo sap ( 675) 713 149.8 1.9e-33 gi|194217306|ref|XP_001501695.2| PREDICTED: simila ( 680) 713 149.9 1.9e-33 gi|22859176|emb|CAD43139.1| hypothetical protein [ ( 691) 713 149.9 1.9e-33 gi|37543626|gb|AAM15734.1| rac-GTP binding protein ( 691) 713 149.9 1.9e-33 gi|114668074|ref|XP_511399.2| PREDICTED: hypotheti ( 695) 713 149.9 1.9e-33 >>gi|10440414|dbj|BAB15740.1| FLJ00042 protein [Homo sap (452 aa) initn: 3202 init1: 3202 opt: 3202 Z-score: 3399.5 bits: 638.2 E(): 1.2e-180 Smith-Waterman score: 3202; 100.000% identity (100.000% similar) in 452 aa overlap (1-452:1-452) 10 20 30 40 50 60 FLJ000 ASSPVTHTSSLFPQANVVCVVYDVSEEATIEKVSPQCRPQQQRHSGRWWPRWTFTQPVAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 ASSPVTHTSSLFPQANVVCVVYDVSEEATIEKVSPQCRPQQQRHSGRWWPRWTFTQPVAS 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 AIAHSILGSLTWSCLTWSHPALSCDPTSPERVWGVPQSEPLRPAVLFLPQFPNPRGGTRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 AIAHSILGSLTWSCLTWSHPALSCDPTSPERVWGVPQSEPLRPAVLFLPQFPNPRGGTRR 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 GPALGAALGLGPSDLGVFGSHWGQTDEAAPAACLLPPALFLWPGLGPSVGLDLPLLLSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 GPALGAALGLGPSDLGVFGSHWGQTDEAAPAACLLPPALFLWPGLGPSVGLDLPLLLSPS 130 140 150 160 170 180 190 200 210 220 230 240 FLJ000 QAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 QAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSM 190 200 210 220 230 240 250 260 270 280 290 300 FLJ000 EAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 EAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQA 250 260 270 280 290 300 310 320 330 340 350 360 FLJ000 LTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 LTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTL 310 320 330 340 350 360 370 380 390 400 410 420 FLJ000 DGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAALRLQRCPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 DGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAALRLQRCPG 370 380 390 400 410 420 430 440 450 FLJ000 ADCGLSLPSDPRAPRLQHGAQPPWLPVCAESV :::::::::::::::::::::::::::::::: gi|104 ADCGLSLPSDPRAPRLQHGAQPPWLPVCAESV 430 440 450 >>gi|119606171|gb|EAW85765.1| ras homolog gene family, m (527 aa) initn: 3202 init1: 3202 opt: 3202 Z-score: 3398.6 bits: 638.3 E(): 1.3e-180 Smith-Waterman score: 3202; 100.000% identity (100.000% similar) in 452 aa overlap (1-452:76-527) 10 20 30 FLJ000 ASSPVTHTSSLFPQANVVCVVYDVSEEATI :::::::::::::::::::::::::::::: gi|119 PEEVPPRAEEITIPADVTPEKVPTHIVDYSASSPVTHTSSLFPQANVVCVVYDVSEEATI 50 60 70 80 90 100 40 50 60 70 80 90 FLJ000 EKVSPQCRPQQQRHSGRWWPRWTFTQPVASAIAHSILGSLTWSCLTWSHPALSCDPTSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EKVSPQCRPQQQRHSGRWWPRWTFTQPVASAIAHSILGSLTWSCLTWSHPALSCDPTSPE 110 120 130 140 150 160 100 110 120 130 140 150 FLJ000 RVWGVPQSEPLRPAVLFLPQFPNPRGGTRRGPALGAALGLGPSDLGVFGSHWGQTDEAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RVWGVPQSEPLRPAVLFLPQFPNPRGGTRRGPALGAALGLGPSDLGVFGSHWGQTDEAAP 170 180 190 200 210 220 160 170 180 190 200 210 FLJ000 AACLLPPALFLWPGLGPSVGLDLPLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AACLLPPALFLWPGLGPSVGLDLPLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWI 230 240 250 260 270 280 220 230 240 250 260 270 FLJ000 PLVNGGTTQGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PLVNGGTTQGPRVPIILVGNKSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISEL 290 300 310 320 330 340 280 290 300 310 320 330 FLJ000 FYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFG 350 360 370 380 390 400 340 350 360 370 380 390 FLJ000 HPLAPQALEDVKTVVCRNVAGGVREDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HPLAPQALEDVKTVVCRNVAGGVREDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRF 410 420 430 440 450 460 400 410 420 430 440 450 FLJ000 PLPEHALHPARPARDHLDHPAALRLQRCPGADCGLSLPSDPRAPRLQHGAQPPWLPVCAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PLPEHALHPARPARDHLDHPAALRLQRCPGADCGLSLPSDPRAPRLQHGAQPPWLPVCAE 470 480 490 500 510 520 FLJ000 SV :: gi|119 SV >>gi|21748540|dbj|BAC03407.1| FLJ00342 protein [Homo sap (233 aa) initn: 1618 init1: 1585 opt: 1596 Z-score: 1699.7 bits: 322.8 E(): 5.7e-86 Smith-Waterman score: 1596; 96.218% identity (96.639% similar) in 238 aa overlap (215-452:2-233) 190 200 210 220 230 240 FLJ000 PAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSMEAVL :: .:: ::::::::::::::::: gi|217 TGGPRRGP------VGNKSDLRSGSSMEAVL 10 20 250 260 270 280 290 300 FLJ000 PIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 PIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRI 30 40 50 60 70 80 310 320 330 340 350 360 FLJ000 FRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 FRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGEA 90 100 110 120 130 140 370 380 390 400 410 420 FLJ000 GCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAALRLQRCPGADCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 GCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAALRLQRCPGADCG 150 160 170 180 190 200 430 440 450 FLJ000 LSLPSDPRAPRLQHGAQPPWLPVCAESV :::::::::::::::::::::::::::: gi|217 LSLPSDPRAPRLQHGAQPPWLPVCAESV 210 220 230 >>gi|14336708|gb|AAK61240.1|AE006464_8 similar to AK0019 (615 aa) initn: 1056 init1: 1056 opt: 1056 Z-score: 1121.3 bits: 217.1 E(): 9.4e-54 Smith-Waterman score: 1056; 99.371% identity (100.000% similar) in 159 aa overlap (204-362:91-249) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::::::::::::::::::: gi|143 SSPVTHTSSLFPQANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSD 70 80 90 100 110 120 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|143 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL 130 140 150 160 170 180 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|143 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV 190 200 210 220 230 240 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL ::::::::: gi|143 REDRLTLDGFLFLNTLFIQRGRHETTWTILRRFGYSDALELTADYLSPLIHVPPGCSTEL 250 260 270 280 290 300 >>gi|108860798|sp|Q8IXI1.2|MIRO2_HUMAN RecName: Full=Mit (618 aa) initn: 1056 init1: 1056 opt: 1056 Z-score: 1121.2 bits: 217.1 E(): 9.4e-54 Smith-Waterman score: 1056; 99.371% identity (100.000% similar) in 159 aa overlap (204-362:92-250) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::::::::::::::::::: gi|108 EQTDEELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSD 70 80 90 100 110 120 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL 130 140 150 160 170 180 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|108 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV 190 200 210 220 230 240 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL ::::::::: gi|108 REDRLTLDGFLFLNTLFIQRGRHETTWTILRRFGYSDALELTADYLSPLIHVPPGCSTEL 250 260 270 280 290 300 >>gi|114660194|ref|XP_001155839.1| PREDICTED: ras homolo (598 aa) initn: 1042 init1: 1042 opt: 1042 Z-score: 1106.6 bits: 214.4 E(): 6.2e-53 Smith-Waterman score: 1042; 98.734% identity (100.000% similar) in 158 aa overlap (204-361:74-231) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::::.:::::::::::::: gi|114 ADVTPEKVPTHIVDYSEAEQTDEELREEIHKIRTKWIPLVNGGTTRGPRVPIILVGNKSD 50 60 70 80 90 100 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL 110 120 130 140 150 160 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV 170 180 190 200 210 220 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL :::::::: gi|114 REDRLTLDEFLFLNTLFIQRGRXXXXXTIXRRFGYSDALELTADYLSPPLRVPPGCSTEL 230 240 250 260 270 280 >>gi|114660192|ref|XP_510715.2| PREDICTED: ras homolog g (616 aa) initn: 1042 init1: 1042 opt: 1042 Z-score: 1106.4 bits: 214.4 E(): 6.3e-53 Smith-Waterman score: 1042; 98.734% identity (100.000% similar) in 158 aa overlap (204-361:92-249) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::::.:::::::::::::: gi|114 EQTDEELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTRGPRVPIILVGNKSD 70 80 90 100 110 120 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL 130 140 150 160 170 180 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV 190 200 210 220 230 240 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL :::::::: gi|114 REDRLTLDEFLFLNTLFIQRGRXXXXXTIXRRFGYSDALELTADYLSPPLRVPPGCSTEL 250 260 270 280 290 300 >>gi|25187967|emb|CAD56957.1| mitochondrial Rho 2 [Homo (618 aa) initn: 1039 init1: 1039 opt: 1039 Z-score: 1103.2 bits: 213.8 E(): 9.5e-53 Smith-Waterman score: 1039; 98.113% identity (99.371% similar) in 159 aa overlap (204-362:92-250) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::::::::::::::::::: gi|251 EQTDEELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSD 70 80 90 100 110 120 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|251 LRSGSSMEAVLPIMSQFSEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL 130 140 150 160 170 180 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|251 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV 190 200 210 220 230 240 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL :::.::::: gi|251 REDQLTLDGFLFLNTLFIQRGRHETTWTILRRFGYSDALELTADYLSPLIHVPPGCSTEL 250 260 270 280 290 300 >>gi|183396454|gb|ACC62129.1| mitochondrial Rho 2 (predi (443 aa) initn: 1011 init1: 988 opt: 988 Z-score: 1051.0 bits: 203.7 E(): 7.7e-50 Smith-Waterman score: 988; 92.453% identity (97.484% similar) in 159 aa overlap (204-362:92-250) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::: .:::::::::::::: gi|183 EQTVEELQDEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTERGPRVPIILVGNKSD 70 80 90 100 110 120 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL :: :::::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|183 LRPGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPETKQL 130 140 150 160 170 180 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV ::::.::::::::::::::::::::::::::::::::::::::::.::: :: ..::::: gi|183 RPACSQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALDDVKMVVRKHVAGGV 190 200 210 220 230 240 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL :.::::::: gi|183 RDDRLTLDGFLFLNTLFIQRGRHETTWTILRRFGYGDALELSPDYLFPPLHVPPGCSTEL 250 260 270 280 290 300 >>gi|75072868|sp|Q864R5.1|MIRO2_PIG RecName: Full=Mitoch (620 aa) initn: 1006 init1: 980 opt: 980 Z-score: 1040.6 bits: 202.2 E(): 2.9e-49 Smith-Waterman score: 980; 91.195% identity (96.226% similar) in 159 aa overlap (204-362:92-250) 180 190 200 210 220 230 FLJ000 PLLLSPSQAHAPAGSHVPAGSLTSQPGFAFQIRTKWIPLVNGGTTQGPRVPIILVGNKSD .::::::::::::: .:::::::::::::: gi|750 EQTAEELQDEIQKASVVCVVYDVSEETTVEKIRTKWIPLVNGGTRRGPRVPIILVGNKSD 70 80 90 100 110 120 240 250 260 270 280 290 FLJ000 LRSGSSMEAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQL :: :.::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|750 LRPGGSMEAVLPIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQL 130 140 150 160 170 180 300 310 320 330 340 350 FLJ000 RPACAQALTRIFRLSDQDLDQALSDEELNAFQKSCFGHPLAPQALEDVKTVVCRNVAGGV ::::::::::::::::::.::::::.:::::: ::::::::::::::: :: ::::::: gi|750 RPACAQALTRIFRLSDQDMDQALSDQELNAFQTCCFGHPLAPQALEDVKLVVSRNVAGGV 190 200 210 220 230 240 360 370 380 390 400 410 FLJ000 REDRLTLDGEAGCPPVPGECGEGAVPGAPPALSRCRFPLPEHALHPARPARDHLDHPAAL ..::::::: gi|750 QDDRLTLDGFLFLNTLFIQRGRHETTWTILRRFGYSDSLELTPDYLFPALHVPPGCSAEL 250 260 270 280 290 300 452 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 15:57:05 2009 done: Fri Feb 27 16:03:48 2009 Total Scan time: 907.410 Total Display time: 0.080 Function used was FASTA [version 34.26.5 April 26, 2007]