# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00035.fasta.huge -Q ../query/FLJ00035.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00035, 187 aa
vs ./tmplib.10216 library
2210807 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.4432+/-0.00332; mu= 17.3519+/- 0.225
mean_var=60.7545+/-13.477, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40
Lambda= 0.164545
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1120 ( 1024 res) hg02941 (1024) 81 27.8 2
KIAA1231 ( 1061 res) fh08195s1 (1061) 81 27.8 2
KIAA1123 ( 1717 res) fh01458 (1717) 82 28.4 2.3
KIAA2034 ( 1571 res) ah04445 (1571) 79 27.6 3.5
KIAA1649 ( 424 res) fk12339 ( 424) 74 25.6 3.8
KIAA1208 ( 950 res) fj07955 ( 950) 76 26.6 4.3
KIAA0182 ( 1157 res) ha02329s1 (1157) 75 26.5 5.7
KIAA0051 ( 1678 res) ha00940 (1678) 76 26.9 6
KIAA0439 ( 995 res) hj00462 ( 995) 74 26.1 6.2
KIAA1276 ( 1068 res) fh00139s1 (1068) 74 26.2 6.4
FLJ00257 ( 820 res) sj09683 ( 820) 73 25.8 6.5
KIAA0917 ( 648 res) hk07974s2 ( 648) 71 25.2 7.9
KIAA0466 ( 1214 res) pg00625 (1214) 73 26.0 8.1
KIAA0677 ( 1073 res) hk02635 (1073) 72 25.7 8.9
KIAA2029 ( 1021 res) pj01256 (1021) 71 25.4 10
FLJ00067 ( 574 res) as00067 ( 574) 69 24.6 10
KIAA0489 ( 192 res) hg01128 ( 192) 63 22.5 15
KIAA0706 ( 1123 res) pj01355 (1123) 69 25.0 15
KIAA1393 ( 500 res) hj06562 ( 500) 66 23.8 16
KIAA1583 ( 435 res) fj06651 ( 435) 65 23.5 17
KIAA1892 ( 476 res) fk04164 ( 476) 65 23.5 18
FLJ00143 ( 373 res) sh04531 ( 373) 64 23.2 18
FLJ00159 ( 567 res) sh06608 ( 567) 65 23.7 20
KIAA1141 ( 914 res) hk01833 ( 914) 66 24.2 22
KIAA1439 ( 561 res) hg01641b ( 561) 64 23.4 23
KIAA1388 ( 599 res) fj06552 ( 599) 64 23.5 24
KIAA1512 ( 2010 res) fg04660y1 (2010) 68 25.2 25
KIAA0762 ( 724 res) hk04668s1 ( 724) 64 23.6 27
KIAA0258 ( 410 res) ha07053 ( 410) 62 22.7 27
FLJ00359 ( 1056 res) sh03991 (1056) 65 24.0 28
KIAA1653 ( 193 res) fg06691 ( 193) 59 21.6 29
KIAA0514 ( 483 res) hf00310 ( 483) 62 22.8 29
KIAA0863 ( 1181 res) hk06535 (1181) 65 24.1 30
KIAA1097 ( 980 res) hk07058 ( 980) 64 23.8 31
KIAA0394 ( 417 res) hf00236 ( 417) 61 22.5 32
FLJ00167 ( 181 res) sh07420 ( 181) 58 21.3 32
KIAA0793 ( 1055 res) hk05692 (1055) 64 23.8 33
KIAA1438 ( 1075 res) hk07374s1 (1075) 64 23.8 33
KIAA0562 ( 931 res) hh01779 ( 931) 63 23.5 36
KIAA0893 ( 974 res) hk08702 ( 974) 63 23.5 37
KIAA1586 ( 739 res) fj08085 ( 739) 62 23.1 37
KIAA0124 ( 682 res) ha01534 ( 682) 61 22.8 42
FLJ00199 ( 383 res) sj03574 ( 383) 59 22.0 42
KIAA0918 ( 966 res) hk09360(revised) ( 966) 62 23.3 43
FLJ00140 ( 579 res) sh03502 ( 579) 60 22.5 45
FLJ00161 ( 596 res) sh06688 ( 596) 60 22.5 46
KIAA0019 ( 838 res) ha00537 ( 838) 61 23.0 47
FLJ00175 ( 1516 res) sj00758 (1516) 63 23.8 47
KIAA1563 ( 1658 res) fh20460s1 (1658) 63 23.9 50
KIAA1737 ( 400 res) pj00125 ( 400) 58 21.8 51
>>KIAA1120 ( 1024 res) hg02941 (1024 aa)
initn: 77 init1: 53 opt: 81 Z-score: 101.0 bits: 27.8 E(): 2
Smith-Waterman score: 81; 46.875% identity (78.125% similar) in 32 aa overlap (16-44:76-107)
10 20 30 40
FLJ000 QFRIYYTHCYLNTHRKLLSSPRPLQSISRA---HIIVRPLFSSLQ
.:: . :::. :::: ...:. :.:::.
KIAA11 GFLVFVSIIDIVVSLASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLK
50 60 70 80 90 100
50 60 70 80 90 100
FLJ000 PMFRAYRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKS
:.
KIAA11 PIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDTRNITNRSDCMAANYRWVHHKYNFD
110 120 130 140 150 160
>>KIAA1231 ( 1061 res) fh08195s1 (1061 aa)
initn: 44 init1: 44 opt: 81 Z-score: 100.9 bits: 27.8 E(): 2
Smith-Waterman score: 91; 25.455% identity (53.939% similar) in 165 aa overlap (32-180:199-362)
10 20 30 40 50 60
FLJ000 FRIYYTHCYLNTHRKLLSSPRPLQSISRAHIIVRPLFSSLQPMFRAYR-AYHVYYITIRH
..::: . :. . ::. ..:::: ::..
KIAA12 VSLDKGDRKERDLHEDLWFELSDETLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKN
170 180 190 200 210 220
70 80 90 100 110
FLJ000 -KPKQ-----LAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVY--GMKSLKLTALCSTI
.::: ::. .... .: . ::: . . .:. : . . .. : . .
KIAA12 VEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHL
230 240 250 260 270 280
120 130 140 150 160
FLJ000 GLHDARGRVGKKV-ARSLVVGIHRLPLKGVLPGW-----RM-LLEEKRERHETGTLQSCH
. :: . : ... .:. : .:. : :: :. . :. :. . :: . :
KIAA12 NSHDEKLDVFSRTRGRGRGRGKRRFG-PGRRPGRPPKFIRLEITSENGEKSDDGTQDLLH
290 300 310 320 330 340
170 180
FLJ000 HGNVTQWHRACSSLLFSFLFFF
. :. .: . :
KIAA12 FPTKEQFDEAEPATLNGLDQPEQTTIPIPQLPQETQSSLEHEPETHTLHLQPQHEESVVP
350 360 370 380 390 400
>>KIAA1123 ( 1717 res) fh01458 (1717 aa)
initn: 75 init1: 51 opt: 82 Z-score: 100.0 bits: 28.4 E(): 2.3
Smith-Waterman score: 82; 46.875% identity (78.125% similar) in 32 aa overlap (16-44:832-863)
10 20 30 40
FLJ000 QFRIYYTHCYLNTHRKLLSSPRPLQSISRAH---IIVRPLFSSLQ
.:: . :::. ::::. ..:. :.:::.
KIAA11 GLLVLISVIDILVSMVSDSGTKILGMLRVLRLLRTLRPLRVISRAQGLKLVVETLMSSLK
810 820 830 840 850 860
50 60 70 80 90 100
FLJ000 PMFRAYRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKS
:.
KIAA11 PIGNIVVICCAFFIIFGILGVQLFKGKFFVCQGEDTRNITNKSDCAEASYRWVRHKYNFD
870 880 890 900 910 920
>>KIAA2034 ( 1571 res) ah04445 (1571 aa)
initn: 76 init1: 49 opt: 79 Z-score: 96.6 bits: 27.6 E(): 3.5
Smith-Waterman score: 79; 24.828% identity (53.793% similar) in 145 aa overlap (34-174:829-971)
10 20 30 40 50 60
FLJ000 IYYTHCYLNTHRKLLSSPRPLQSISRAHIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPK
.: .:::: : . . .. .
KIAA20 GELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTA-RQEGEQRRRRLELQLQEV
800 810 820 830 840 850
70 80 90 100 110 120
FLJ000 QLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGM-KSLKLTA-LCST-IGLHDARGR
: :: . : :: :.. .. : :. : . :...:. : :: ::::.
KIAA20 QGRAGDGERARAEAAEKLQRAQAELE-NVSGALNEAESKTIRLSKELSSTEAQLHDAQEL
860 870 880 890 900 910
130 140 150 160 170
FLJ000 VGKKVARSLVVGIHRLPLKGVLPGWRMLLEEKRE-RHETGTLQSCHHGNVTQWHRACSSL
. ... .:..: . ... : : :::. :...: . ......:.:
KIAA20 LQEETRAKLALGSRVRAMEAEAAGLREQLEEEAAARERAGRELQTAQAQLSEWRRRQEEE
920 930 940 950 960 970
180
FLJ000 LFSFLFFF
KIAA20 AGALEAGEEARRRAAREAEALTQRLAEKTETVDRLERGRRRLQQELDDATMDLEQQRQLV
980 990 1000 1010 1020 1030
>>KIAA1649 ( 424 res) fk12339 (424 aa)
initn: 56 init1: 56 opt: 74 Z-score: 96.0 bits: 25.6 E(): 3.8
Smith-Waterman score: 74; 35.556% identity (64.444% similar) in 45 aa overlap (112-155:63-107)
90 100 110 120 130 140
FLJ000 EEEPLQMSTNFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKVAR-SLVVGIHRLPLKG
::: ::: ..: : :: .:. :. .::
KIAA16 VRSRVGIQQGLLSQSTRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRIKG
40 50 60 70 80 90
150 160 170 180
FLJ000 VLPGWRMLLEEKRERHETGTLQSCHHGNVTQWHRACSSLLFSFLFFF
. : .:. ....
KIAA16 KVQDAREMLNSRKQQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVTPALKLTKTI
100 110 120 130 140 150
>>KIAA1208 ( 950 res) fj07955 (950 aa)
initn: 85 init1: 56 opt: 76 Z-score: 95.0 bits: 26.6 E(): 4.3
Smith-Waterman score: 76; 23.636% identity (65.455% similar) in 55 aa overlap (84-138:683-736)
60 70 80 90 100 110
FLJ000 YYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKSLKLTALCSTIG
: .:.. .. .:. ... :... . . .
KIAA12 HMIDRIVMQELQDMFPEEFDKTSFHKVRHSEDMQFAFSYFYYLMSAVQPLNISQVFDEVD
660 670 680 690 700 710
120 130 140 150 160 170
FLJ000 LHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLEEKRERHETGTLQSCHHGNVTQWH
: : .. . :.:.. ::.:::
KIAA12 T-DQSGVLSDREIRTLATRIHELPLSLQDLTGLEHMLINCSKMLPADITQLNNIPPTQES
720 730 740 750 760 770
>>KIAA0182 ( 1157 res) ha02329s1 (1157 aa)
initn: 41 init1: 41 opt: 75 Z-score: 92.8 bits: 26.5 E(): 5.7
Smith-Waterman score: 75; 33.962% identity (58.491% similar) in 53 aa overlap (36-88:224-273)
10 20 30 40 50 60
FLJ000 YTHCYLNTHRKLLSSPRPLQSISRAHIIVRPLFSSLQPMFRAYRAYHVYYITIRHKPKQL
: .:: :. . :.:.. .:. : .:
KIAA01 YLAPHPFPHPAFRMDDSYCLSALRSPFYPIPTPGSLPPLHPS--AMHLHLSGVRY-PPEL
200 210 220 230 240 250
70 80 90 100 110 120
FLJ000 AAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKSLKLTALCSTIGLHDARGRVGKKV
. . : .: .::: : :::
KIAA01 SHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKERE
260 270 280 290 300 310
>>KIAA0051 ( 1678 res) ha00940 (1678 aa)
initn: 49 init1: 49 opt: 76 Z-score: 92.4 bits: 26.9 E(): 6
Smith-Waterman score: 76; 29.167% identity (60.417% similar) in 48 aa overlap (131-176:31-78)
110 120 130 140 150
FLJ000 KSLKLTALCSTIGLHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLEE--KRERHET
.:. : .:: . :. :: .:.:...
KIAA00 LPPSAPPRFHGFLSRDSGSSAMSAADEVDGLGVARPHYGSVLDNERLTAEEMDERRRQNV
10 20 30 40 50 60
160 170 180
FLJ000 GTLQSCHHGNVTQWHRACSSLLFSFLFFF
. :: .. .: .::
KIAA00 AYEYLCHLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGNFFSPKVVSLKKIYDRE
70 80 90 100 110 120
>>KIAA0439 ( 995 res) hj00462 (995 aa)
initn: 78 init1: 54 opt: 74 Z-score: 92.2 bits: 26.1 E(): 6.2
Smith-Waterman score: 74; 40.000% identity (55.000% similar) in 40 aa overlap (136-174:230-263)
110 120 130 140 150 160
FLJ000 TALCSTIGLHDARGRVGKKVARSLVVGIHRLPLKGVLPGWRMLLEEKRERHETGTLQSCH
:: . ::: ::: . . : .
KIAA04 DEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGW----EEKVD--NLGRTYYVN
200 210 220 230 240 250
170 180
FLJ000 HGN-VTQWHRACSSLLFSFLFFF
:.: .:::::
KIAA04 HNNRTTQWHRPSLMDVSSESDNNIRQINQEAAHRRFRSRRHISEDLEPEPSEGGDVPEPW
260 270 280 290 300 310
>>KIAA1276 ( 1068 res) fh00139s1 (1068 aa)
initn: 82 init1: 59 opt: 74 Z-score: 91.9 bits: 26.2 E(): 6.4
Smith-Waterman score: 76; 24.779% identity (53.982% similar) in 113 aa overlap (78-177:641-753)
50 60 70 80 90 100
FLJ000 YRAYHVYYITIRHKPKQLAAGLLNIATAEIFSGLEEEPLQMSTNFSNFLVYGMKS-----
.: ::.: :: . .. ..::.
KIAA12 AKLQAQVSQMQQALEQCTSNYREDLQALKQLSDLEREKLQHELQETTQQNHAMKAQLEAS
620 630 640 650 660 670
110 120 130 140 150
FLJ000 ----LKLTALCSTIGLHDARGRVGKKVARSLVVG--IHRLPLKGVLPGWRMLLEEKRERH
:.. :. .. :. :. ..:: . ::: :... :. :.:.:::
KIAA12 HQRALRMLEKARHQELKATEERLKKESSHSLQIQHQTHRLELQALEEKARQELQEERERM
680 690 700 710 720 730
160 170 180
FLJ000 ET--GTLQSCHHGNVTQWHRACSSLLFSFLFFF
.. . : . .... . :::
KIAA12 QAQQALLLESLRQELSEQQAACSGHQKDLEALQAELRALGRQQASSQCPGDSKDHIIATE
740 750 760 770 780 790
187 residues in 1 query sequences
2210807 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:28:53 2009 done: Fri Feb 27 10:28:53 2009
Total Scan time: 0.360 Total Display time: 0.040
Function used was FASTA [version 34.26.5 April 26, 2007]