# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00031.fasta.huge -Q ../query/FLJ00031.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00031, 188 aa vs ./tmplib.10216 library 2210806 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.5652+/-0.00415; mu= 14.6248+/- 0.280 mean_var=103.8534+/-23.036, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40 Lambda= 0.125853 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00022 ( 344 res) as00022 ( 344) 1262 238.5 2.6e-64 KIAA0284 ( 1573 res) pf09542 (1573) 122 32.4 0.13 KIAA0142 ( 802 res) ha01169 ( 802) 95 27.1 2.6 KIAA0319 ( 1109 res) hg00378 (1109) 96 27.5 2.8 FLJ00149 ( 792 res) sh05462 ( 792) 92 26.5 3.8 KIAA0435 ( 787 res) hh02241 ( 787) 90 26.2 4.8 KIAA0620 ( 1985 res) hg04174 (1985) 92 27.1 6.4 KIAA0351 ( 590 res) hg01609 ( 590) 86 25.3 6.8 KIAA0940 ( 699 res) hh04894 ( 699) 86 25.4 7.5 KIAA1599 ( 608 res) fj09928 ( 608) 83 24.7 10 KIAA0495 ( 209 res) hg00106 ( 209) 76 22.8 13 KIAA0730 ( 1004 res) hk03632 (1004) 83 25.0 13 KIAA1424 ( 1944 res) ha06448 (1944) 86 26.0 13 KIAA0303 ( 2137 res) hg00009 (2137) 86 26.1 14 KIAA0616 ( 634 res) hg03623 ( 634) 80 24.2 15 KIAA1725 ( 1042 res) pf00950 (1042) 81 24.7 18 KIAA0561 ( 1308 res) hh01676 (1308) 81 24.8 20 KIAA1288 ( 1245 res) hh13551(revised) (1245) 80 24.6 22 KIAA1618 ( 1415 res) fj14314 (1415) 79 24.5 27 FLJ00332 ( 201 res) sj03652 ( 201) 70 21.7 27 FLJ00058 ( 164 res) as00058 ( 164) 69 21.4 27 KIAA0979 ( 1483 res) hj07056s1 (1483) 79 24.6 28 KIAA0248 ( 1880 res) ha02775s1 (1880) 80 24.9 28 KIAA0675 ( 1217 res) hk02566 (1217) 78 24.3 28 KIAA1779 ( 1233 res) hg04229 (1233) 78 24.3 28 KIAA0240 ( 1087 res) fg03390 (1087) 77 24.0 30 FLJ00318 ( 127 res) sh07374 ( 127) 67 20.9 30 KIAA1124 ( 1760 res) fg05708 (1760) 79 24.7 30 KIAA0153 ( 638 res) ha00521 ( 638) 74 23.1 32 KIAA1736 ( 1244 res) ph00725 (1244) 77 24.1 32 FLJ00416 ( 221 res) sj04686 ( 221) 69 21.6 32 KIAA0437 ( 1605 res) hj00203s1 (1605) 78 24.4 33 KIAA0197 ( 1314 res) ha03030 (1314) 77 24.1 33 KIAA1443 ( 573 res) hj01820b ( 573) 73 22.9 34 KIAA1804 ( 490 res) fj22769 ( 490) 72 22.6 35 KIAA1028 ( 501 res) fh00176s1 ( 501) 72 22.6 36 KIAA1761 ( 837 res) ha03234 ( 837) 74 23.3 37 KIAA0864 ( 1402 res) hk06577s1 (1402) 76 24.0 39 KIAA1866 ( 1783 res) pf09734 (1783) 77 24.3 39 FLJ00191 ( 523 res) sj02390 ( 523) 71 22.5 41 KIAA0937 ( 653 res) hh04715 ( 653) 72 22.8 41 KIAA0400 ( 1022 res) hg01091 (1022) 74 23.4 42 KIAA1935 ( 441 res) fk03135(revised) ( 441) 70 22.2 43 KIAA0216 ( 2067 res) hf00331s1 (2067) 77 24.4 43 KIAA2006 ( 1367 res) ff02026 (1367) 75 23.8 43 KIAA0079 ( 1102 res) ha03543 (1102) 74 23.5 43 KIAA0204 ( 1164 res) ha02801 (1164) 74 23.5 45 KIAA1342 ( 426 res) fj00418 ( 426) 69 22.0 47 KIAA0482 ( 1332 res) hj01880 (1332) 74 23.6 48 KIAA0929 ( 1663 res) hh03374 (1663) 75 23.9 49 >>FLJ00022 ( 344 res) as00022 (344 aa) initn: 1262 init1: 1262 opt: 1262 Z-score: 1247.9 bits: 238.5 E(): 2.6e-64 Smith-Waterman score: 1262; 100.000% identity (100.000% similar) in 188 aa overlap (1-188:157-344) 10 20 30 FLJ000 ETVDTQEVAFRKKRLCIKFIPRDSTEAAIC :::::::::::::::::::::::::::::: FLJ000 KENSHLGNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAIC 130 140 150 160 170 180 40 50 60 70 80 90 FLJ000 DIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 DIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR 190 200 210 220 230 240 100 110 120 130 140 150 FLJ000 HISLTLPATFRGRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 HISLTLPATFRGRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGIT 250 260 270 280 290 300 160 170 180 FLJ000 IKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS :::::::::::::::::::::::::::::::::::::: FLJ000 IKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS 310 320 330 340 >>KIAA0284 ( 1573 res) pf09542 (1573 aa) initn: 99 init1: 56 opt: 122 Z-score: 122.4 bits: 32.4 E(): 0.13 Smith-Waterman score: 128; 26.286% identity (50.286% similar) in 175 aa overlap (27-184:833-1002) 10 20 30 40 50 FLJ000 ETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQ-APPQY--TFIGELNS :: : . .:.: : .:: .... . KIAA02 RSPRAPGEPTPASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVYVSANGR 810 820 830 840 850 860 60 70 80 90 100 FLJ000 MGIWYRMGRVPRNHDSSQPTTPSQSS-----AASTPAPNLPRHISL-TLPATFRGRNSTR : : : :: :. :. :. : : :.. :::. : ::: : . . ..: KIAA02 MVIQLRPGRSPEP-DGPAPAFLRQESFTKEPASGPPAPGKPPHISSHPLLQDLAATRAAR 870 880 890 900 910 920 110 120 130 140 150 FLJ000 TDYEYQHSNLY------AISAMDGVPFMISEKFSCVPESMQ--PFDLLGITIKSLAEIEK :.. : ..: :..:... . : : : : : :. . .... KIAA02 MDFHSQDTHLILKETETALAALEARLLSNSVDAECEGGSTPRPPEDALS----GDSDVDT 930 940 950 960 970 160 170 180 FLJ000 EYEYSFRTEQSAAARLPPSPTRCQQIPQS :.:. .:. . :.: : :. KIAA02 ASTVSLRSGKSGPSPTTPQPLRAQKEMSPSPPAAQDPGGTALVSAREQSSERQHHPLGPT 980 990 1000 1010 1020 1030 >>KIAA0142 ( 802 res) ha01169 (802 aa) initn: 75 init1: 75 opt: 95 Z-score: 98.9 bits: 27.1 E(): 2.6 Smith-Waterman score: 95; 24.786% identity (50.427% similar) in 117 aa overlap (63-173:570-684) 40 50 60 70 80 90 FLJ000 RIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPRHI :: . :.:.:::.. : : ::: : . KIAA01 NQQDLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSKPAPLTPAYH 540 550 560 570 580 590 100 110 120 130 140 FLJ000 SLTLPATFRGRNSTRTDY----EYQHSNLYAISAMDGVPFMISEKFSCVPESMQ--PFDL .: : . .: : .. . . ...: . .: . : :... : . KIAA01 TLPHP-SHHGTPHTTINWGPLEPPKTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKTM 600 610 620 630 640 650 150 160 170 180 FLJ000 LGITIKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS . : : .: . : ...:.:: KIAA01 KKLLPKRKPE-RKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSSSRKESA 660 670 680 690 700 710 >>KIAA0319 ( 1109 res) hg00378 (1109 aa) initn: 81 init1: 56 opt: 96 Z-score: 98.4 bits: 27.5 E(): 2.8 Smith-Waterman score: 96; 27.950% identity (51.553% similar) in 161 aa overlap (39-188:210-361) 10 20 30 40 50 60 FLJ000 AFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAP---PQYTFIGEL-NSMGIWYR-MGRV :: : .:: : : .: : . .: KIAA03 FLGKDWGLEEMSEYADDYRELEKDLLQPSGKQEPRGSAEYTDWGLLPGSEGAFNSSVGDS 180 190 200 210 220 230 70 80 90 100 110 120 FLJ000 PRNHDSSQ--PTTPSQSSAASTPAPNLP-RHISLTLPATFRGRNSTRTDYEYQHSNLYAI : .: : . .::::::.:: : . : ::.: .: .. . . :.: KIAA03 PAVPAETQQDPELHYLNESASTPAPKLPERSVLLPLPTT---PSSGEVLEKEKASQLQEQ 240 250 260 270 280 290 130 140 150 160 170 FLJ000 SAMDGVPFMISEKFSCVPESMQPFDLLGITIKS---LAEIEKEYEYSFRTEQSAAARLPP :. .. .. . : : :.. : ..:... :. :.:. : ..:: : KIAA03 SSNSSGKEVLMPSHSLPPASLE---LSSVTVEKSPVLTVTPGSTEHSIPTPPTSAA---P 300 310 320 330 340 350 180 FLJ000 SPTRCQQIPQS : . ...: : KIAA03 SESTPSELPISPTTAPRTVKELTVSAGDNLIITLPDNEVELKAFVAPAPPVETTYNYEWN 360 370 380 390 400 410 >>FLJ00149 ( 792 res) sh05462 (792 aa) initn: 40 init1: 40 opt: 92 Z-score: 96.0 bits: 26.5 E(): 3.8 Smith-Waterman score: 92; 24.793% identity (50.413% similar) in 121 aa overlap (61-180:544-657) 40 50 60 70 80 90 FLJ000 DIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR : .: . .. :. :: :.: : . . FLJ001 RTWFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPSGGSQESSAEQPRKGGAQ 520 530 540 550 560 570 100 110 120 130 140 FLJ000 HISLTLPATFR-GRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGI : . .: : :: . :.. : ::.. : :.: . . . :: : : . FLJ001 HGVSSCEGTQRTGRRKGRSQSVQAH------SALSQRPPMLSSS-GPILESRQTFLQTST 580 590 600 610 620 150 160 170 180 FLJ000 TIKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS ... ::. . . :... .. :: : FLJ001 SVHELAQRLSGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSF 630 640 650 660 670 680 FLJ001 LFGKRSFSSALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAASQATRHLSEPCEPPDA 690 700 710 720 730 740 >>KIAA0435 ( 787 res) hh02241 (787 aa) initn: 40 init1: 40 opt: 90 Z-score: 94.1 bits: 26.2 E(): 4.8 Smith-Waterman score: 90; 24.793% identity (50.413% similar) in 121 aa overlap (61-180:551-664) 40 50 60 70 80 90 FLJ000 DIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR : .: . .. :. :: :.: : . . KIAA04 RTWFWTKWVRMRKDCNARQHSGGNIEDVDGGGAPTTGGNNAPNGGSQESSAEQPRKGGAQ 530 540 550 560 570 580 100 110 120 130 140 FLJ000 HISLTLPATFR-GRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGI : . .: : :: . :.. : ::.. : :.: . . . :: : : . KIAA04 HGVSSCEGTQRTGRRKGRSQSVQAH------SALSQRPPMLSSS-GPILESRQTFLQTST 590 600 610 620 630 150 160 170 180 FLJ000 TIKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS ... ::. . . :... .. :: : KIAA04 SVHELAQRLSGSRLSLHASATSLHSQPPPVTTTGHLSVRERAEALIRSSLGSSTSSTLSF 640 650 660 670 680 690 KIAA04 LFGKRSFSSALVISGLSAAEGGNTSDTQSSSSVNIVMGPSARAASQATRVRGWAGLTRTG 700 710 720 730 740 750 >>KIAA0620 ( 1985 res) hg04174 (1985 aa) initn: 34 init1: 34 opt: 92 Z-score: 91.9 bits: 27.1 E(): 6.4 Smith-Waterman score: 92; 25.217% identity (52.174% similar) in 115 aa overlap (60-165:925-1038) 30 40 50 60 70 80 FLJ000 CDIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLP .:.. :. . : : :.. :::.. KIAA06 FLDSPEPMTVMVYNCAMGSPDCSQCLGREDLGHLCMWSDGCRLRGPLQPMAGTCPAPEIR 900 910 920 930 940 950 90 100 110 120 130 140 FLJ000 RHISLTLPA------TFRGRNSTRTDYEYQHSNLYAISAMDGVP--FMISEKFSCVPESM :. : :.:::: : . :. . : . .: . .::.. :: . KIAA06 AIEPLSGPLDGGTLLTIRGRNLGRRLSDVAHGVWIGGVACEPLPDRYTVSEEIVCVT-GP 960 970 980 990 1000 1010 150 160 170 180 FLJ000 QPFDLLGI-TIKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS : : :. :... : ... ..:. KIAA06 APGPLSGVVTVNASKEGKSRDRFSYVLPLVHSLEPTMGPKAGGTRITIHGNDLHVGSELQ 1020 1030 1040 1050 1060 1070 >>KIAA0351 ( 590 res) hg01609 (590 aa) initn: 86 init1: 86 opt: 86 Z-score: 91.5 bits: 25.3 E(): 6.8 Smith-Waterman score: 86; 52.174% identity (73.913% similar) in 23 aa overlap (69-91:348-370) 40 50 60 70 80 90 FLJ000 KQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPRHISLTLPA : .:: :. : :.: :.: .::: KIAA03 RIEPGSSSPRLVSSKEDLAGPSAGSGSARFSRRPTCPDTSVAGSLPTPPVPRHRKSHSLG 320 330 340 350 360 370 100 110 120 130 140 150 FLJ000 TFRGRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGITIKSLAEIE KIAA03 NNMMCQLSVVESKSATFPSEKARHLLDDSVLESRSPRRGLALTSSSAVTNGLSLGSSESS 380 390 400 410 420 430 >>KIAA0940 ( 699 res) hh04894 (699 aa) initn: 90 init1: 57 opt: 86 Z-score: 90.7 bits: 25.4 E(): 7.5 Smith-Waterman score: 86; 27.869% identity (60.656% similar) in 61 aa overlap (37-97:36-91) 10 20 30 40 50 60 FLJ000 EVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRN : .: : . ..: : . ...:. KIAA09 KNWTLKAAQTMQDDLLMDKSKTQPQPQQQQRQQQQPQPESSVSEAPSTPL---SSETPKP 10 20 30 40 50 60 70 80 90 100 110 120 FLJ000 HDSSQPTTPSQSSAASTPAPNLPRHISLTLPATFRGRNSTRTDYEYQHSNLYAISAMDGV ...: ..:. : ::. :::: : .... : KIAA09 EENS--AVPALSPAAAPPAPNGPDKMQMESPLLPGLSFHQPPQQPPPPQEPAAPGASLSP 70 80 90 100 110 120 130 140 150 160 170 180 FLJ000 PFMISEKFSCVPESMQPFDLLGITIKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIP KIAA09 SFGSTWSTGTTNAVEDSFFQGITPVNGTMLFQNFPHHVNPVFGGTFSPQIGLAQTQHHQQ 130 140 150 160 170 180 >>KIAA1599 ( 608 res) fj09928 (608 aa) initn: 71 init1: 71 opt: 83 Z-score: 88.4 bits: 24.7 E(): 10 Smith-Waterman score: 83; 27.907% identity (52.326% similar) in 86 aa overlap (13-92:531-608) 10 20 30 FLJ000 ETVDTQEVAFRKKRLCIKFIP-RDSTEAAICDIRIMGRTK-- .: ..:.: :: .. . . :.: KIAA15 IIVGVGQAEFDAMVELDGDDVRISSRGKLAERDIVQFVPFRDYVDRTGNHVLSMARLARD 510 520 530 540 550 560 40 50 60 70 80 90 FLJ000 ---QAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPRHISLTL . : : ... ....:: : :: .. .:::: : . :: : :: KIAA15 VLAEIPDQ--LVSYMKAQGI-----R-PRPPPAAPTHSPSQSPARTPPASPLHTHI 570 580 590 600 100 110 120 130 140 150 FLJ000 PATFRGRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGITIKSLAE 188 residues in 1 query sequences 2210806 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:28:35 2009 done: Fri Feb 27 10:28:35 2009 Total Scan time: 0.350 Total Display time: 0.040 Function used was FASTA [version 34.26.5 April 26, 2007]