# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00028.fasta.nr -Q ../query/FLJ00028.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 FLJ00028, 91 aa
 vs /cdna2/lib/nr/nr library

2693465022 residues in 7827732 sequences
 statistics sampled from 60000 to 7826853 sequences
  Expectation_n fit: rho(ln(x))= 5.1515+/-0.000186; mu= 4.5895+/- 0.010
 mean_var=73.6600+/-14.067, 0's: 50 Z-trim: 51  B-trim: 0 in 0/67
 Lambda= 0.149437

FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                      opt bits E(7827732)
gi|10440385|dbj|BAB15728.1| FLJ00028 protein [Homo (  91)  672 152.7 6.9e-36


>>gi|10440385|dbj|BAB15728.1| FLJ00028 protein [Homo sap  (91 aa)
 initn: 672 init1: 672 opt: 672  Z-score: 800.6  bits: 152.7 E(): 6.9e-36
Smith-Waterman score: 672;  100.000% identity (100.000% similar) in 91 aa overlap (1-91:1-91)

               10        20        30        40        50        60
FLJ000 PAGTILPALLSHPDPEGCPDQRAPSSQPHSAALTSGHHPPSLTRPAELCRPQSAENLKCC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|104 PAGTILPALLSHPDPEGCPDQRAPSSQPHSAALTSGHHPPSLTRPAELCRPQSAENLKCC
               10        20        30        40        50        60

               70        80        90 
FLJ000 DFALLQGPAMECPLCEHFESYASIHPRRSHP
       :::::::::::::::::::::::::::::::
gi|104 DFALLQGPAMECPLCEHFESYASIHPRRSHP
               70        80        90 




91 residues in 1 query   sequences
2693465022 residues in 7827732 library sequences
 Tcomplib [34.26] (2 proc)
 start: Fri Feb 27 14:11:34 2009 done: Fri Feb 27 14:15:12 2009
 Total Scan time: 484.730 Total Display time:  0.000

Function used was FASTA [version 34.26.5 April 26, 2007]