# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00024.fasta.huge -Q ../query/FLJ00024.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00024, 195 aa vs ./tmplib.10216 library 2210799 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.4763+/-0.00375; mu= 12.8248+/- 0.254 mean_var=80.0155+/-17.411, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40 Lambda= 0.143380 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA0755 ( 1093 res) hk04532 (1093) 93 28.6 1.3 FLJ00386 ( 811 res) sj04204 ( 811) 88 27.5 2.1 KIAA1051 ( 402 res) hh04271 ( 402) 82 25.8 3.2 KIAA1761 ( 837 res) ha03234 ( 837) 84 26.6 3.8 KIAA1816 ( 1162 res) fh16716 (1162) 80 26.0 8.4 KIAA1053 ( 508 res) hh05049 ( 508) 76 24.7 8.8 KIAA1447 ( 1721 res) fh04686 (1721) 80 26.2 11 KIAA0748 ( 472 res) hk04254 ( 472) 74 24.3 11 KIAA1190 ( 174 res) hg03443a ( 174) 68 22.5 14 KIAA0245 ( 552 res) ha07016 ( 552) 73 24.2 14 KIAA1326 ( 424 res) fh14376 ( 424) 71 23.6 16 KIAA1076 ( 804 res) hj06779 ( 804) 73 24.3 18 KIAA0241 ( 522 res) ha04847 ( 522) 71 23.7 18 KIAA1009 ( 1345 res) hj03795(revised) (1345) 75 25.0 19 KIAA0324 ( 2800 res) ee08846s1 (2800) 78 26.0 20 KIAA0621 ( 753 res) hg04539 ( 753) 72 24.1 20 KIAA0295 ( 981 res) hf00226 ( 981) 73 24.4 21 KIAA1096 ( 1919 res) pf00402 (1919) 76 25.4 21 KIAA1242 ( 504 res) fh10406 ( 504) 70 23.5 21 KIAA0569 ( 1318 res) hh02356 (1318) 74 24.8 22 KIAA1987 ( 357 res) fk04103 ( 357) 68 22.9 22 FLJ00184 ( 580 res) sj01836 ( 580) 70 23.6 23 KIAA0558 ( 1145 res) hh01485 (1145) 73 24.5 23 KIAA0429 ( 666 res) hk07754 ( 666) 70 23.6 25 KIAA1639 ( 2584 res) af14886 (2584) 76 25.6 25 KIAA0253 ( 708 res) ha07036 ( 708) 70 23.7 25 KIAA1022 ( 1131 res) fg00613 (1131) 72 24.3 26 KIAA0557 ( 493 res) hh01334 ( 493) 68 23.1 27 KIAA1150 ( 499 res) hg02066 ( 499) 68 23.1 27 KIAA1696 ( 635 res) fj12768 ( 635) 69 23.4 27 KIAA0122 ( 1010 res) ha03733 (1010) 71 24.0 28 KIAA1452 ( 694 res) fh12994 ( 694) 69 23.4 29 KIAA0385 ( 1380 res) hh00802 (1380) 72 24.4 29 KIAA0857 ( 733 res) hk06227 ( 733) 69 23.5 30 KIAA1651 ( 91 res) fj00563 ( 91) 59 20.3 33 KIAA0774 ( 1381 res) bh00283 (1381) 71 24.2 34 KIAA1498 ( 1731 res) hh01611 (1731) 72 24.5 34 KIAA1305 ( 1819 res) fh04045s1 (1819) 72 24.6 35 FLJ00038 ( 199 res) as00038 ( 199) 62 21.3 35 KIAA0039 ( 491 res) ha02030 ( 491) 66 22.6 36 KIAA1887 ( 967 res) fk02232 ( 967) 69 23.6 36 KIAA1930 ( 664 res) fj11193 ( 664) 67 23.0 38 FLJ00241 ( 286 res) sj07515 ( 286) 63 21.7 39 KIAA1795 ( 572 res) fj17734 ( 572) 66 22.7 39 KIAA0257 ( 1805 res) ha07065 (1805) 71 24.3 40 KIAA1035 ( 1220 res) hk08527 (1220) 69 23.7 42 FLJ00215 ( 510 res) sj05257 ( 510) 65 22.5 42 FLJ00050 ( 270 res) as00050 ( 270) 62 21.5 43 KIAA1225 ( 1371 res) fh04221s1 (1371) 69 23.8 45 KIAA1703 ( 1165 res) fj16891 (1165) 68 23.5 47 >>KIAA0755 ( 1093 res) hk04532 (1093 aa) initn: 64 init1: 64 opt: 93 Z-score: 104.6 bits: 28.6 E(): 1.3 Smith-Waterman score: 93; 35.385% identity (52.308% similar) in 65 aa overlap (133-192:204-263) 110 120 130 140 150 FLJ000 TWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQDQPKIL---SKNE : ::. . :. : ::.:: :. KIAA07 STSSVTQLGSQLSAMQINSYGSGMAPPSQGPPGPLSATS-LQTPPRPPQPSILQPGSQVL 180 190 200 210 220 230 160 170 180 190 FLJ000 PIPPSALVKPNANDAQVLMWRPK--YGQPLVVIPPKHR : ::..: :.:. . :.:: : : :: KIAA07 PPPPTTLNGPGASPLPLPMYRPDGLSGPP----PPNAQYQPPPLPGQTLGAGYPPQQANS 240 250 260 270 280 KIAA07 GPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKLDPDSIPSPIQVIENDRASRGGQVYATNT 290 300 310 320 330 340 >>FLJ00386 ( 811 res) sj04204 (811 aa) initn: 69 init1: 59 opt: 88 Z-score: 100.5 bits: 27.5 E(): 2.1 Smith-Waterman score: 88; 31.081% identity (59.459% similar) in 74 aa overlap (119-192:307-367) 90 100 110 120 130 140 FLJ000 VAKLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIA :.: ..: ... ..: : . :.: FLJ003 QQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQQ--PPVA 280 290 300 310 320 330 150 160 170 180 190 FLJ000 QDQPKILSKNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIPPKHR :.::. : ::.. ..: ...::.: : :: : . :: FLJ003 QNQPSQL------PPQSQTQPLVSQAQAL---P--GQMLYTQPPLKFVRAPMVVQQPPVQ 340 350 360 370 380 FLJ003 PQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARFPPTTAVSAIPSSSIPLGRQ 390 400 410 420 430 440 >>KIAA1051 ( 402 res) hh04271 (402 aa) initn: 44 init1: 44 opt: 82 Z-score: 97.3 bits: 25.8 E(): 3.2 Smith-Waterman score: 82; 25.301% identity (55.422% similar) in 83 aa overlap (84-162:244-325) 60 70 80 90 100 110 FLJ000 CTIVGPTKRDSKFIISMNDNFYPSVTWAVPVSESNVAKLTNIYRDQSFTTWLVATNTSTN .:: ..: : . . .. :.. . . : KIAA10 EHVYPDHRLVDPHIEMIPGAHSIPSGHVYSLSEPEMAALRD-FVARNVKDGLITPTIAPN 220 230 240 250 260 270 120 130 140 150 160 FLJ000 DMIILQTLH-WRMQLSIEVN-PNRPL--GQRARLREPIAQDQPKILSKNEPIPPSALVKP .::. . :..:.: . :: .: :: : .:: .. . .: .: KIAA10 GAQVLQVKRGWKLQVSYDCRAPNNFTIQNQYPRLSIPNLEDQAHLATYTEFVPQIPGYQT 280 290 300 310 320 330 170 180 190 FLJ000 NANDAQVLMWRPKYGQPLVVIPPKHR KIAA10 YPTYAAYPTYPVGFAWYPVGRDGQGRSLYVPVMITWNPHWYRQPPVPQYPPPQPPPPPPP 340 350 360 370 380 390 >>KIAA1761 ( 837 res) ha03234 (837 aa) initn: 42 init1: 42 opt: 84 Z-score: 95.9 bits: 26.6 E(): 3.8 Smith-Waterman score: 84; 26.582% identity (56.962% similar) in 79 aa overlap (3-78:404-478) 10 20 FLJ000 LGLQPVLEHPSFLRL---KNIPLSSWELPDLQ . : :.::. :: :..: : : .. KIAA17 KADDSREEEEENDDDNSLEGETFPLERDEVMPPPLQHPQTDRLTCPKGLP---WA-PKVR 380 390 400 410 420 30 40 50 60 70 80 FLJ000 EGKIQAISDSDGVNYPWYGNTTETCTIVGPTKRDSKFIISMNDNFYPSVTWAVPVSESNV : :. . .:. .. : ..: :.:: . . : ..... : :. KIAA17 EKDIEMFLESSRSKFIGYTLGSDTNTVVGLPRPIHESIKTLKQHKYTSIAEVQAQMEEEY 430 440 450 460 470 480 90 100 110 120 130 140 FLJ000 AKLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQ KIAA17 LRSPLSGGEEEVEQVPAETLYQGLLPSLPQYMIALLKILLAAAPTSKAKTDSINILADVL 490 500 510 520 530 540 >>KIAA1816 ( 1162 res) fh16716 (1162 aa) initn: 87 init1: 53 opt: 80 Z-score: 89.8 bits: 26.0 E(): 8.4 Smith-Waterman score: 80; 28.049% identity (51.220% similar) in 82 aa overlap (121-194:637-716) 100 110 120 130 140 FLJ000 KLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNR-PLGQRARLREPIAQ : :: . .:::. :: . .. : KIAA18 PNNLGTNSLNKQHNILTYGNTKPLTHFNADLSQRMTPPV-ANPNKNPLMPYIQQQQQQQQ 610 620 630 640 650 660 150 160 170 180 190 FLJ000 DQPKILSKNEPIPPSALVKPNAN---DAQVLMWRPKYG---QPLVVIP-PKHR .: . ....: :: : : :. : . :. . : ::.. :.: KIAA18 QQQQQQQQQQP-PPPQLQAPRAHLSEDQKRLLLMKQKGVMNQPMAYAALPSHGQEQHPVG 670 680 690 700 710 720 KIAA18 LPRTTGPMQSSVPPGSGGMVSGASPAGPGFLGSQPQAAIMKQMLIDQRAQLIEQQKQQFL 730 740 750 760 770 780 >>KIAA1053 ( 508 res) hh05049 (508 aa) initn: 70 init1: 70 opt: 76 Z-score: 89.4 bits: 24.7 E(): 8.8 Smith-Waterman score: 76; 31.915% identity (53.191% similar) in 47 aa overlap (116-162:192-238) 90 100 110 120 130 140 FLJ000 ESNVAKLTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLRE : :: :: . :.. . .:: :: KIAA10 KIVISIQKLKERQNLLKSLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRRE 170 180 190 200 210 220 150 160 170 180 190 FLJ000 PIAQDQPKILSKNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIPPKHR : : ::.... . : KIAA10 PQAPRQPSLMGPESQSPDCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEG 230 240 250 260 270 280 >>KIAA1447 ( 1721 res) fh04686 (1721 aa) initn: 54 init1: 54 opt: 80 Z-score: 87.8 bits: 26.2 E(): 11 Smith-Waterman score: 80; 38.636% identity (56.818% similar) in 44 aa overlap (146-184:121-161) 120 130 140 150 160 170 FLJ000 IILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQDQPK--ILSKNEPIPPSALVKPNA-N :. :: : .. .:: : :: :.: KIAA14 HSYGLGHPALHQNLPPGFPASVAGPVPSVFPLPQDAPTQLVILPSEPTPHSA---PHALA 100 110 120 130 140 180 190 FLJ000 DA--QVLMWRPKYGQPLVVIPPKHR :. :. .: : :: KIAA14 DVMDQASLWPPMYGGRGPASHMQHPGQLPVYSRPQLLRQQELYALQQQRAAQFQRKPEDQ 150 160 170 180 190 200 >>KIAA0748 ( 472 res) hk04254 (472 aa) initn: 69 init1: 69 opt: 74 Z-score: 87.6 bits: 24.3 E(): 11 Smith-Waterman score: 74; 35.294% identity (52.941% similar) in 51 aa overlap (127-177:221-268) 100 110 120 130 140 150 FLJ000 RDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQDQPKILS :: : .:. : : :::. :.. KIAA07 YVSKTPVQKFTPSHMFWNCNHPTDVPSIRILSREPEPQSP---RDRLRKAISKMCLYTCP 200 210 220 230 240 160 170 180 190 FLJ000 KNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIPPKHR ...: :: : :. : :: KIAA07 RDRPPPPHNTPKRNSLDQVVLEVMDKVKEEKQFLQQDSDLGQFSQEDPVPPAEGKKLPTS 250 260 270 280 290 300 >>KIAA1190 ( 174 res) hg03443a (174 aa) initn: 27 init1: 27 opt: 68 Z-score: 85.9 bits: 22.5 E(): 14 Smith-Waterman score: 68; 23.077% identity (47.436% similar) in 78 aa overlap (122-194:77-152) 100 110 120 130 140 150 FLJ000 LTNIYRDQSFTTWLVATNTSTNDMIILQTLHWRMQLSIEVNPNRPLGQRARLREPIAQDQ : : . . . : ::: :. . . . KIAA11 DEHMKTHTGEKPYICEICGKSFTSRPNMKRHRRTHTGEKPYPCDVCGQRFRFSNMLKAHK 50 60 70 80 90 100 160 170 180 190 FLJ000 PKILS-----KNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIPPKHR : . .. .: . . :. .:..: : : : .. :: : KIAA11 EKCFRVSHTLAGDGVPAAPGLPPTQPQAHALPLLP--GLPQTLPPPPHLPPPPPLFPTTA 110 120 130 140 150 160 KIAA11 SPGGRMNANN 170 >>KIAA0245 ( 552 res) ha07016 (552 aa) initn: 35 init1: 35 opt: 73 Z-score: 85.7 bits: 24.2 E(): 14 Smith-Waterman score: 84; 30.667% identity (60.000% similar) in 75 aa overlap (103-176:1-61) 80 90 100 110 120 130 FLJ000 NFYPSVTWAVPVSESNVAKLTNIYRDQSFTTWLVATNTSTNDMIIL-QTLHWRMQLSIEV .::.::. : . :.: : .: .: . .. KIAA02 SWLTATSDSLVQAILLPQPPEWGLQATANT 10 20 30 140 150 160 170 180 190 FLJ000 NPNRPLGQRARLREPIAQDQPKILSKNEPIPPSALVKPNANDAQVLMWRPKYGQPLVVIP . ..:. ..: ::: ..: : :: ::....:: KIAA02 GVQEPFVMEA--REP-----------GRPTPTYHLV-PNTSQSQVEEDVSSPPQRSSETM 40 50 60 70 FLJ000 PKHR KIAA02 QLKKEISLLNGVSLVVGNMIGSGIFVSPKGVLVHTASYGMSLIVWAIGGLFSVVGALCYA 80 90 100 110 120 130 195 residues in 1 query sequences 2210799 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:27:29 2009 done: Fri Feb 27 10:27:30 2009 Total Scan time: 0.360 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]