# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/as00022.fasta.huge -Q ../query/FLJ00022.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00022, 344 aa vs ./tmplib.10216 library 2210650 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 8.9073+/-0.0068; mu= -5.0011+/- 0.456 mean_var=276.2132+/-61.671, 0's: 0 Z-trim: 1 B-trim: 0 in 0/40 Lambda= 0.077171 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) FLJ00031 ( 188 res) as00031 ( 188) 1262 152.7 1.7e-38 FLJ00096 ( 208 res) as00096 ( 208) 125 26.1 2.4 KIAA1814 ( 1285 res) ph00952 (1285) 140 28.6 2.6 KIAA1029 ( 1015 res) fh00363 (1015) 125 26.9 7.1 KIAA1883 ( 1480 res) fh02249 (1480) 128 27.4 7.3 FLJ00018 ( 1430 res) as00018 (1430) 127 27.2 7.7 KIAA1355 ( 1189 res) fj01564 (1189) 125 26.9 7.9 KIAA1076 ( 804 res) hj06779 ( 804) 121 26.3 8.2 KIAA0904 ( 1535 res) ha00554 (1535) 123 26.8 11 KIAA0239 ( 849 res) ha06313 ( 849) 116 25.8 13 KIAA1442 ( 627 res) hh10127b ( 627) 113 25.3 13 KIAA1817 ( 997 res) fj14474 ( 997) 117 26.0 13 FLJ00034 ( 1343 res) as00034 (1343) 119 26.3 14 KIAA0269 ( 567 res) ha06751 ( 567) 111 25.0 14 KIAA1809 ( 800 res) fk01629 ( 800) 114 25.5 14 KIAA0294 ( 1405 res) hf00223s1 (1405) 119 26.3 14 FLJ00178 ( 249 res) sj01102 ( 249) 103 23.8 15 KIAA1205 ( 1217 res) fg03511a (1217) 117 26.0 15 KIAA1064 ( 1315 res) hj05008s1 (1315) 117 26.1 16 KIAA1645 ( 386 res) fg04139 ( 386) 106 24.3 16 KIAA1100 ( 444 res) hk07907 ( 444) 107 24.5 16 KIAA0009 ( 319 res) ha00176 ( 319) 104 24.0 16 KIAA0775 ( 639 res) hk05255 ( 639) 110 25.0 16 KIAA0360 ( 1019 res) hh00062s1 (1019) 114 25.6 17 KIAA1902 ( 1112 res) hj04383 (1112) 114 25.7 18 KIAA0490 ( 135 res) hh00727 ( 135) 95 22.6 18 FLJ00412 ( 749 res) sf00011 ( 749) 110 25.0 18 KIAA1971 ( 830 res) fk08985 ( 830) 110 25.1 20 KIAA1051 ( 402 res) hh04271 ( 402) 103 24.0 20 KIAA1743 ( 1036 res) pj01380s1 (1036) 111 25.3 21 FLJ00037 ( 145 res) as00037 ( 145) 93 22.4 22 KIAA1096 ( 1919 res) pf00402 (1919) 116 26.1 22 FLJ00230 ( 414 res) sj06557 ( 414) 102 23.9 23 KIAA1429 ( 1795 res) fh08353 (1795) 115 26.0 23 KIAA1014 ( 1050 res) hk02388s2 (1050) 110 25.2 23 KIAA1856 ( 1134 res) fh03203 (1134) 110 25.2 24 KIAA0616 ( 634 res) hg03623 ( 634) 104 24.3 26 KIAA0781 ( 950 res) hk09678 ( 950) 107 24.8 27 KIAA1295 ( 550 res) fg01760 ( 550) 102 24.0 27 KIAA0900 ( 503 res) hk09606s1 ( 503) 101 23.9 28 KIAA1246 ( 832 res) hh00149a ( 832) 105 24.5 29 FLJ00072 ( 204 res) as00072 ( 204) 92 22.5 30 KIAA0730 ( 1004 res) hk03632 (1004) 106 24.7 30 KIAA2014 ( 1032 res) ff00951s1 (1032) 106 24.7 31 KIAA0522 ( 1555 res) hg01393 (1555) 109 25.3 32 KIAA1818 ( 1157 res) hg00622 (1157) 106 24.8 33 KIAA1778 ( 341 res) pg00707 ( 341) 95 23.0 34 KIAA1576 ( 448 res) fj02237 ( 448) 97 23.4 35 KIAA0381 ( 1114 res) ah04695 (1114) 105 24.7 35 KIAA1522 ( 1044 res) fh14706(revised) (1044) 104 24.5 36 >>FLJ00031 ( 188 res) as00031 (188 aa) initn: 1262 init1: 1262 opt: 1262 Z-score: 784.3 bits: 152.7 E(): 1.7e-38 Smith-Waterman score: 1262; 100.000% identity (100.000% similar) in 188 aa overlap (157-344:1-188) 130 140 150 160 170 180 FLJ000 KENSHLGNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAIC :::::::::::::::::::::::::::::: FLJ000 ETVDTQEVAFRKKRLCIKFIPRDSTEAAIC 10 20 30 190 200 210 220 230 240 FLJ000 DIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 DIRIMGRTKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR 40 50 60 70 80 90 250 260 270 280 290 300 FLJ000 HISLTLPATFRGRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: FLJ000 HISLTLPATFRGRNSTRTDYEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGIT 100 110 120 130 140 150 310 320 330 340 FLJ000 IKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS :::::::::::::::::::::::::::::::::::::: FLJ000 IKSLAEIEKEYEYSFRTEQSAAARLPPSPTRCQQIPQS 160 170 180 >>FLJ00096 ( 208 res) as00096 (208 aa) initn: 99 init1: 99 opt: 125 Z-score: 99.6 bits: 26.1 E(): 2.4 Smith-Waterman score: 125; 38.889% identity (51.852% similar) in 54 aa overlap (3-48:75-124) 10 20 FLJ000 GSRSSCGAGSCRLG--------PGPGPSRAAR :.: :. .: : ::::: . FLJ000 RGCRYSGCKMWPVRAVSIFSTLIGRRLAWRRGSEGGTACTKGLVLPAGDEPGPGPELFPE 50 60 70 80 90 100 30 40 50 60 70 80 FLJ000 AMRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASR . :. . :::: :::::: FLJ000 SA----LVQAGSAPPPPPPPPPPPLCLLLLRAESEGAVLMTHPRAWEQRGGGLREARGGL 110 120 130 140 150 160 >>KIAA1814 ( 1285 res) ph00952 (1285 aa) initn: 182 init1: 116 opt: 140 Z-score: 98.9 bits: 28.6 E(): 2.6 Smith-Waterman score: 140; 50.000% identity (61.538% similar) in 52 aa overlap (1-48:1098-1148) 10 20 FLJ000 GSRSSCGA--GSCRLGPGPGPSRAARAMRS :.: . :: :: :::.: . :: : : KIAA18 HAMGSFSGVAGGTVGGVFNHAVPSASAHPFGARVGRGAACGSATLGPSPLQA-AASASAS 1070 1080 1090 1100 1110 1120 30 40 50 60 70 80 FLJ000 CFCVRRSRD--PPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRNR : . : . :::: :::::: KIAA18 SFQAPASVETRPPPPPPPPPPPLPPPAHLGRSPAGPPVLHAPPPPNAALPPPPTLLASNP 1130 1140 1150 1160 1170 1180 >>KIAA1029 ( 1015 res) fh00363 (1015 aa) initn: 270 init1: 105 opt: 125 Z-score: 91.1 bits: 26.9 E(): 7.1 Smith-Waterman score: 125; 47.500% identity (67.500% similar) in 40 aa overlap (36-75:899-935) 10 20 30 40 50 60 FLJ000 CGAGSCRLGPGPGPSRAARAMRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSE : :::: :::::: : .: .: .. : KIAA10 LARNIINAARRKSASPRSAGAENPRPFSPPRAPPPPPPPPPPPPRM--RSPQP-ARPGSA 870 880 890 900 910 920 70 80 90 100 110 120 FLJ000 ALPETSMDPITGVGVVASRNRAPTGYDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSF :.: ... :: KIAA10 AVPGAAFAPIPRSPLPAGPSSCTSPRSPLPAPPRPFLYRRSPTDSDVSLDSEDSGAKSPG 930 940 950 960 970 980 >>KIAA1883 ( 1480 res) fh02249 (1480 aa) initn: 496 init1: 107 opt: 128 Z-score: 90.9 bits: 27.4 E(): 7.3 Smith-Waterman score: 128; 33.333% identity (56.522% similar) in 69 aa overlap (1-69:1132-1195) 10 20 30 FLJ000 GSRSSCGAGSCRLGPGPGPSRAARAMRSCF :.:. :.:. .:: ::. .. : . KIAA18 GTLEPGTERRAPETGGAPRAPGAGRLDLGSGGRAPVGTGT---APGGGPGSGVDAKAGWV 1110 1120 1130 1140 1150 40 50 60 70 80 90 FLJ000 CVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRNRAPTG : . :::: :::: : . . :... :. :: KIAA18 DNTRPQPPPPPLPPPPEAQPRRLEPAPPRARP--EVAPEGEPGAPDSRAGGDTALSGDGD 1160 1170 1180 1190 1200 1210 100 110 120 130 140 150 FLJ000 YDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPV KIAA18 PPKPERKGPEMPRLFLDLGPPQGNSEQIKARLSRLSLALPPLTLTPFPGPGPRRPPWEGA 1220 1230 1240 1250 1260 1270 >>FLJ00018 ( 1430 res) as00018 (1430 aa) initn: 165 init1: 117 opt: 127 Z-score: 90.5 bits: 27.2 E(): 7.7 Smith-Waterman score: 127; 42.553% identity (61.702% similar) in 47 aa overlap (12-57:1337-1383) 10 20 30 40 FLJ000 GSRSSCGAGSCRLGPGPGPSRAARAMRSCFCVRRSRDPPP- : ::: : :.:. : . :. .::: FLJ000 PPSSRQLLGPNAAALSRYLAASYISQSLARRQGPGGGAPAASRGSWSSAPTSRASSPPPQ 1310 1320 1330 1340 1350 1360 50 60 70 80 90 100 FLJ000 PQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRNRAPTGYDVVAQTADG :::::: .: . .:. FLJ000 PQPPPPAARRLSYATTVNIHVGGGGRLRPAKAQVRLNHPALLASTQESMGLHRAQGAPDA 1370 1380 1390 1400 1410 1420 >>KIAA1355 ( 1189 res) fj01564 (1189 aa) initn: 143 init1: 64 opt: 125 Z-score: 90.3 bits: 26.9 E(): 7.9 Smith-Waterman score: 125; 27.500% identity (52.500% similar) in 120 aa overlap (38-154:626-742) 10 20 30 40 50 60 FLJ000 AGSCRLGPGPGPSRAARAMRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEAL :: ::: : :: :. : KIAA13 AQNKLGSGPFSEIVLSAPEGLPTTPAAPGLPPTEIPPPLSPPRGLVAVRTPRGVLLHWDP 600 610 620 630 640 650 70 80 90 100 110 120 FLJ000 PETSMDPITGVGVVASRNRAPTGYDVVAQTADGVDADLWKDGLFKSKVT--RYLCFTRSF :: . : : : .. :..:. .. :....: ::.:. . : . :. :: KIAA13 PE--LVPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSF 660 670 680 690 700 710 130 140 150 160 170 180 FLJ000 SKENSHLGNVLVD-MKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAA .. :. .:: .. ... . :: :..: KIAA13 VSDPSNTANVSTSGLEVYPSRTQLP-GLLPQPVLAGVVGGVCFLGVAVLVSILAGCLLNR 720 730 740 750 760 770 >>KIAA1076 ( 804 res) hj06779 (804 aa) initn: 156 init1: 93 opt: 121 Z-score: 90.0 bits: 26.3 E(): 8.2 Smith-Waterman score: 121; 42.105% identity (65.789% similar) in 38 aa overlap (38-74:422-458) 10 20 30 40 50 60 FLJ000 AGSCRLGPGPGPSRAARAMRSCFCVRRSRDPP-PPQPPPPPPQRGTDQSTMPEVKDLSEA :: ::::::::: .. . .: :.:.. KIAA10 GQPQTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLP-FKELDNQ 400 410 420 430 440 450 70 80 90 100 110 120 FLJ000 LPETSMDPITGVGVVASRNRAPTGYDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSFS : .. : KIAA10 WPSEAIPPGPRGRDEVTEEYMELAKSRGPWRRPPKKRHEDLVPPAGSPELSPPQPLFRPR 460 470 480 490 500 510 >>KIAA0904 ( 1535 res) ha00554 (1535 aa) initn: 103 init1: 103 opt: 123 Z-score: 87.7 bits: 26.8 E(): 11 Smith-Waterman score: 127; 28.058% identity (50.360% similar) in 139 aa overlap (16-133:1291-1429) 10 20 30 40 FLJ000 GSRSSCGAGSCRLGPGP-GPSRAARAMRSCFCVRRSRDPP-PPQP :: :: :. . .: .:: :: : KIAA09 QNILAVLLSQLMKTQEPAGSLEENNSDKNSGPQGPRRTPTMPQEEAAEKRPPEPPGPPPP 1270 1280 1290 1300 1310 1320 50 60 70 80 90 FLJ000 PPPPPQRGTDQSTMPEVKD--LSEALPETSMDP-ITGVGVVASRNRA--PTGYDVVAQ-- ::::: : :. :. . .. :: . .: : . ...: : :.. . KIAA09 PPPPPLVEGDLSSAPQELNPAVTAALLQLLSQPEAEPPGHLPHEHQALRPMEYSTRPRPN 1330 1340 1350 1360 1370 1380 100 110 120 130 140 FLJ000 ----TADG-------VDADLWKDG-LFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDI ..:: .:.: ..: . .... : .:.:: :::: KIAA09 RTYGNTDGPETGFSAIDTDERNSGPALTESLVQTLVKNRTFSGSLSHLGESSSYQGTGSV 1390 1400 1410 1420 1430 1440 150 160 170 180 190 200 FLJ000 KDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAPPQYTFI KIAA09 QFPGDQDLRFARVPLALHPVVGQPFLKAEGSSNSVVHAETKLQNYGELGPGTTGASSSGA 1450 1460 1470 1480 1490 1500 >>KIAA0239 ( 849 res) ha06313 (849 aa) initn: 86 init1: 86 opt: 116 Z-score: 86.7 bits: 25.8 E(): 13 Smith-Waterman score: 117; 42.553% identity (55.319% similar) in 47 aa overlap (13-59:644-681) 10 20 30 40 FLJ000 GSRSSCGAGSCRLGPGPGPSRAARAMRSCFCVRRSRDPPPPQ : :: :.: ::. :.: : . KIAA02 GHREDPAPGLLSEELLQDEETLLSFMRDPSLRPGD-PARKARG--------RTRLPAKKK 620 630 640 650 660 50 60 70 80 90 100 FLJ000 PPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRNRAPTGYDVVAQTADGVD ::::::: : . : :. KIAA02 PPPPPPQDGPGSRTTPDKAPKKTWGQDAGSGKGGQGPPTRKPPRRTSSHLPSSPAAGDCP 670 680 690 700 710 720 344 residues in 1 query sequences 2210650 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:27:27 2009 done: Fri Feb 27 10:27:28 2009 Total Scan time: 0.460 Total Display time: 0.070 Function used was FASTA [version 34.26.5 April 26, 2007]