# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00013.fasta.nr -Q ../query/FLJ00013.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00013, 75 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825793 sequences Expectation_n fit: rho(ln(x))= 4.4481+/-0.000176; mu= 6.0454+/- 0.010 mean_var=48.4646+/- 9.639, 0's: 48 Z-trim: 62 B-trim: 2286 in 1/65 Lambda= 0.184231 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|10440357|dbj|BAB15714.1| FLJ00013 protein [Homo ( 75) 494 137.9 1.4e-31 gi|114681333|ref|XP_001149365.1| PREDICTED: acyl-C ( 334) 391 110.9 8.1e-23 gi|21750855|dbj|BAC03853.1| unnamed protein produc ( 440) 312 90.0 2.1e-16 gi|91993047|gb|AAI14613.1| ACSS1 protein [Homo sap ( 453) 312 90.0 2.2e-16 gi|114681331|ref|XP_001149649.1| PREDICTED: acyl-C ( 518) 312 90.0 2.4e-16 gi|114681329|ref|XP_001149714.1| PREDICTED: acyl-C ( 559) 312 90.0 2.6e-16 gi|194382898|dbj|BAG59005.1| unnamed protein produ ( 568) 312 90.0 2.6e-16 gi|109093155|ref|XP_001099092.1| PREDICTED: simila ( 574) 312 90.0 2.7e-16 gi|114681325|ref|XP_001149586.1| PREDICTED: acyl-C ( 574) 312 90.0 2.7e-16 gi|193785371|dbj|BAG54524.1| unnamed protein produ ( 575) 312 90.0 2.7e-16 gi|114681335|ref|XP_001148942.1| PREDICTED: acyl-C ( 582) 312 90.0 2.7e-16 gi|34531025|dbj|BAC86035.1| unnamed protein produc ( 606) 312 90.0 2.8e-16 gi|119630513|gb|EAX10108.1| acyl-CoA synthetase sh ( 687) 312 90.1 3.1e-16 gi|28278540|gb|AAH44588.1| Acyl-CoA synthetase sho ( 687) 312 90.1 3.1e-16 gi|114681327|ref|XP_001149851.1| PREDICTED: acyl-C ( 688) 312 90.1 3.1e-16 gi|109093157|ref|XP_001099300.1| PREDICTED: simila ( 688) 312 90.1 3.1e-16 gi|24659677|gb|AAH39261.1| Acyl-CoA synthetase sho ( 689) 312 90.1 3.1e-16 gi|30172968|sp|Q9NUB1.2|ACS2L_HUMAN RecName: Full= ( 689) 312 90.1 3.1e-16 gi|114681323|ref|XP_001149014.1| PREDICTED: acyl-C ( 699) 312 90.1 3.1e-16 gi|119630512|gb|EAX10107.1| acyl-CoA synthetase sh ( 759) 312 90.1 3.3e-16 gi|119630515|gb|EAX10110.1| acyl-CoA synthetase sh ( 860) 312 90.1 3.7e-16 gi|21410169|gb|AAH30930.1| Acss1 protein [Mus musc ( 419) 307 88.6 5.2e-16 gi|74196453|dbj|BAE34365.1| unnamed protein produc ( 682) 307 88.8 7.7e-16 gi|30172937|sp|Q99NB1.1|ACS2L_MOUSE RecName: Full= ( 682) 307 88.8 7.7e-16 gi|149031122|gb|EDL86149.1| rCG37494 [Rattus norve ( 682) 303 87.7 1.6e-15 gi|194224085|ref|XP_001491024.2| PREDICTED: acyl-C ( 967) 304 88.0 1.8e-15 gi|73989844|ref|XP_534200.2| PREDICTED: similar to ( 628) 297 86.1 4.5e-15 gi|149610024|ref|XP_001507198.1| PREDICTED: simila ( 478) 295 85.5 5.2e-15 gi|118091933|ref|XP_001234991.1| PREDICTED: simila ( 644) 296 85.8 5.6e-15 gi|194044375|ref|XP_001927148.1| PREDICTED: simila ( 646) 289 84.0 2e-14 gi|47224301|emb|CAG09147.1| unnamed protein produc ( 715) 286 83.2 3.8e-14 gi|47222355|emb|CAG05104.1| unnamed protein produc ( 702) 285 82.9 4.5e-14 gi|118087758|ref|XP_415011.2| PREDICTED: similar t ( 602) 284 82.6 4.8e-14 gi|12697772|dbj|BAB21611.1| acetyl-CoA synthetase ( 675) 282 82.1 7.6e-14 gi|133777925|gb|AAI14699.1| Acyl-CoA synthetase sh ( 675) 282 82.1 7.6e-14 gi|198420297|ref|XP_002119483.1| PREDICTED: simila ( 674) 274 80.0 3.3e-13 gi|212720616|ref|NP_001074125.3| acyl-CoA syntheta ( 693) 270 78.9 7.1e-13 gi|166796329|gb|AAI59208.1| Zgc:158738 protein [Da ( 693) 270 78.9 7.1e-13 gi|156218234|gb|EDO39135.1| predicted protein [Nem ( 601) 264 77.3 1.9e-12 gi|221110778|ref|XP_002165730.1| PREDICTED: simila ( 419) 257 75.3 5.2e-12 gi|210113558|gb|EEA61325.1| hypothetical protein B ( 643) 255 74.9 1.1e-11 gi|115625657|ref|XP_790649.2| PREDICTED: similar t ( 655) 242 71.5 1.2e-10 gi|163778666|gb|EDQ92280.1| predicted protein [Mon ( 643) 226 67.2 2.2e-09 gi|159879101|gb|EDP73057.1| Acetate--CoA ligase [H ( 315) 219 65.2 4.5e-09 gi|209558200|gb|EEA08245.1| acetyl-coenzyme A synt ( 741) 217 64.9 1.3e-08 gi|211966407|gb|EEB01603.1| acetyl-coenzyme A synt ( 535) 215 64.2 1.4e-08 gi|221502085|gb|EEE27831.1| acetyl-coenzyme A synt ( 565) 215 64.2 1.5e-08 gi|6647433|sp|Q27549.1|ACSA_CRYPV RecName: Full=Ac ( 694) 215 64.3 1.8e-08 gi|46227354|gb|EAK88289.1| acetyl-coenzyme A synth ( 695) 215 64.3 1.8e-08 gi|221481363|gb|EEE19757.1| acetyl-coenzyme A synt ( 704) 215 64.3 1.8e-08 >>gi|10440357|dbj|BAB15714.1| FLJ00013 protein [Homo sap (75 aa) initn: 494 init1: 494 opt: 494 Z-score: 723.3 bits: 137.9 E(): 1.4e-31 Smith-Waterman score: 494; 100.000% identity (100.000% similar) in 75 aa overlap (1-75:1-75) 10 20 30 40 50 60 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKYGDAWVKKYDRSSLRTLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|104 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKYGDAWVKKYDRSSLRTLG 10 20 30 40 50 60 70 FLJ000 SGERPALQQERLCLP ::::::::::::::: gi|104 SGERPALQQERLCLP 70 >>gi|114681333|ref|XP_001149365.1| PREDICTED: acyl-CoA s (334 aa) initn: 388 init1: 388 opt: 391 Z-score: 565.8 bits: 110.9 E(): 8.1e-23 Smith-Waterman score: 391; 95.312% identity (96.875% similar) in 64 aa overlap (2-65:1-64) 10 20 30 40 50 60 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKYGDAWVKKYDRSSLRTLG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKYGDAWVKKYDRSSLRTLG 10 20 30 40 50 70 FLJ000 SGERPALQQERLCLP : .: gi|114 SVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRPSEEGAEILPAMAMRPFF 60 70 80 90 100 110 >>gi|21750855|dbj|BAC03853.1| unnamed protein product [H (440 aa) initn: 309 init1: 309 opt: 312 Z-score: 450.6 bits: 90.0 E(): 2.1e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:119-170) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|217 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 90 100 110 120 130 140 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|217 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 150 160 170 180 190 200 >>gi|91993047|gb|AAI14613.1| ACSS1 protein [Homo sapiens (453 aa) initn: 309 init1: 309 opt: 312 Z-score: 450.4 bits: 90.0 E(): 2.2e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:325-376) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|919 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 300 310 320 330 340 350 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|919 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 360 370 380 390 400 410 >>gi|114681331|ref|XP_001149649.1| PREDICTED: acyl-CoA s (518 aa) initn: 309 init1: 309 opt: 312 Z-score: 449.6 bits: 90.0 E(): 2.4e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:197-248) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|114 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 170 180 190 200 210 220 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|114 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 230 240 250 260 270 280 >>gi|114681329|ref|XP_001149714.1| PREDICTED: acyl-CoA s (559 aa) initn: 309 init1: 309 opt: 312 Z-score: 449.1 bits: 90.0 E(): 2.6e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:238-289) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|114 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 210 220 230 240 250 260 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|114 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 270 280 290 300 310 320 >>gi|194382898|dbj|BAG59005.1| unnamed protein product [ (568 aa) initn: 309 init1: 309 opt: 312 Z-score: 449.0 bits: 90.0 E(): 2.6e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:247-298) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|194 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 220 230 240 250 260 270 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|194 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 280 290 300 310 320 330 >>gi|109093155|ref|XP_001099092.1| PREDICTED: similar to (574 aa) initn: 309 init1: 309 opt: 312 Z-score: 448.9 bits: 90.0 E(): 2.7e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:367-418) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|109 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 340 350 360 370 380 390 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|109 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 400 410 420 430 440 450 >>gi|114681325|ref|XP_001149586.1| PREDICTED: acyl-CoA s (574 aa) initn: 309 init1: 309 opt: 312 Z-score: 448.9 bits: 90.0 E(): 2.7e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:367-418) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|114 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 340 350 360 370 380 390 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|114 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 400 410 420 430 440 450 >>gi|193785371|dbj|BAG54524.1| unnamed protein product [ (575 aa) initn: 309 init1: 309 opt: 312 Z-score: 448.9 bits: 90.0 E(): 2.7e-16 Smith-Waterman score: 312; 90.385% identity (96.154% similar) in 52 aa overlap (14-65:368-419) 10 20 30 40 FLJ000 TMSALLLTVNFGLSVGRYWETVERLKINQFYGAPTAVRLLLKY ..:::::::::::::::::::::::::::: gi|193 GWITGHSYVVYGPLCNGATSVLFESTPVYPNAGRYWETVERLKINQFYGAPTAVRLLLKY 340 350 360 370 380 390 50 60 70 FLJ000 GDAWVKKYDRSSLRTLGSGERPALQQERLCLP :::::::::::::::::: .: gi|193 GDAWVKKYDRSSLRTLGSVGEPINCEAWEWLHRVVGDSRCTLVDTWWQTETGGICIAPRP 400 410 420 430 440 450 75 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 12:07:04 2009 done: Fri Feb 27 12:10:45 2009 Total Scan time: 463.250 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]